RNA–Protein interactions for RNA: ENST00000463375.1

TMEM56-204, Transcript of transmembrane protein 56, humanhuman

TSL 5

Gene TMEM56, Length 349 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM56-204ENST00000463375 PHRF1Q9P1Y6 1649 aaKnown RBP-0.64□□□□□ -2.51
TMEM56-204ENST00000463375 LAMA4Q16363 1823 aa-0.64□□□□□ -2.51
TMEM56-204ENST00000463375 TNRC6BQ9UPQ9 1833 aaKnown RBP-0.64□□□□□ -2.51
TMEM56-204ENST00000463375 BRCA2P51587 3418 aa-0.64□□□□□ -2.51
TMEM56-204ENST00000463375 PKDREJQ9NTG1 2253 aa-0.64□□□□□ -2.51
TMEM56-204ENST00000463375 PRR14LQ5THK1 2151 aa-0.64□□□□□ -2.51
TMEM56-204ENST00000463375 BAZ2BQ9UIF8 2168 aaKnown RBP-0.64□□□□□ -2.51
TMEM56-204ENST00000463375 PCDH15Q96QU1 1955 aa-0.64□□□□□ -2.51
TMEM56-204ENST00000463375 ADAMTSL3P82987 1691 aa-0.64□□□□□ -2.51
TMEM56-204ENST00000463375 MED14O60244 1454 aa-0.64□□□□□ -2.51
TMEM56-204ENST00000463375 SCAF11Q99590 1463 aaKnown RBP-0.64□□□□□ -2.51
TMEM56-204ENST00000463375 RAD54L2Q9Y4B4 1467 aa-0.64□□□□□ -2.51
TMEM56-204ENST00000463375 TRGV4A0A0C4DH28 118 aa-0.64□□□□□ -2.51
TMEM56-204ENST00000463375 IGHV2-70DA0A0C4DH43 119 aa-0.64□□□□□ -2.51
TMEM56-204ENST00000463375 ZNF860A6NHJ4 632 aa-0.64□□□□□ -2.51
TMEM56-204ENST00000463375 D6RAR5 112 aa-0.64□□□□□ -2.51
TMEM56-204ENST00000463375 H0YJW9 148 aa-0.64□□□□□ -2.51
TMEM56-204ENST00000463375 H7C417 338 aa-0.64□□□□□ -2.51
TMEM56-204ENST00000463375 K7EMT4 169 aa-0.64□□□□□ -2.51
TMEM56-204ENST00000463375 CCL21O00585 134 aa-0.64□□□□□ -2.51
TMEM56-204ENST00000463375 STAMBPO95630 424 aa-0.64□□□□□ -2.51
TMEM56-204ENST00000463375 PRM1P04553 51 aa-0.64□□□□□ -2.51
TMEM56-204ENST00000463375 KRT8P05787 483 aa-0.64□□□□□ -2.51
TMEM56-204ENST00000463375 CD2P06729 351 aa-0.64□□□□□ -2.51
TMEM56-204ENST00000463375 PTPN6P29350 595 aa-0.64□□□□□ -2.51
TMEM56-204ENST00000463375 BDKRB1P46663 353 aa-0.64□□□□□ -2.51
TMEM56-204ENST00000463375 SLCO1A2P46721 670 aa-0.64□□□□□ -2.51
TMEM56-204ENST00000463375 SMSP52788 366 aa-0.64□□□□□ -2.51
TMEM56-204ENST00000463375 SRP54P61011 504 aaKnown RBP-0.64□□□□□ -2.51
TMEM56-204ENST00000463375 TSPY1Q01534 308 aa-0.64□□□□□ -2.51
TMEM56-204ENST00000463375 TGM3Q08188 693 aa-0.64□□□□□ -2.51
TMEM56-204ENST00000463375 CLEC12BQ2HXU8 276 aa-0.64□□□□□ -2.51
TMEM56-204ENST00000463375 PGGHGQ32M88 737 aa-0.64□□□□□ -2.51
TMEM56-204ENST00000463375 KRTAP25-1Q3LHN0 102 aa-0.64□□□□□ -2.51
TMEM56-204ENST00000463375 ASB16-AS1Q495Z4 193 aa-0.64□□□□□ -2.51
TMEM56-204ENST00000463375 CCDC158Q5M9N0 1113 aa-0.64□□□□□ -2.51
TMEM56-204ENST00000463375 MPP7Q5T2T1 576 aa-0.64□□□□□ -2.51
TMEM56-204ENST00000463375 HECTD3Q5T447 861 aa-0.64□□□□□ -2.51
TMEM56-204ENST00000463375 ANKRD22Q5VYY1 191 aa-0.64□□□□□ -2.51
TMEM56-204ENST00000463375 TMEM205Q6UW68 189 aa-0.64□□□□□ -2.51
TMEM56-204ENST00000463375 C10orf99Q6UWK7 81 aa-0.64□□□□□ -2.51
TMEM56-204ENST00000463375 COX6B2Q6YFQ2 88 aa-0.64□□□□□ -2.51
TMEM56-204ENST00000463375 LINC00322Q6ZN03 302 aaPredicted RBP-0.64□□□□□ -2.51
TMEM56-204ENST00000463375 Q6ZN92 141 aa-0.64□□□□□ -2.51
TMEM56-204ENST00000463375 LINC00173Q6ZV60 143 aa-0.64□□□□□ -2.51
TMEM56-204ENST00000463375 C16orf62Q7Z3J2 963 aa-0.64□□□□□ -2.51
TMEM56-204ENST00000463375 SLC26A11Q86WA9 606 aa-0.64□□□□□ -2.51
TMEM56-204ENST00000463375 METTL23Q86XA0 190 aa-0.64□□□□□ -2.51
TMEM56-204ENST00000463375 STKLD1Q8NE28 680 aa-0.64□□□□□ -2.51
TMEM56-204ENST00000463375 LMX1AQ8TE12 382 aa-0.64□□□□□ -2.51
TMEM56-204ENST00000463375 TSEN15Q8WW01 171 aaKnown RBP-0.64□□□□□ -2.51
TMEM56-204ENST00000463375 MRPS31Q92665 395 aaKnown RBP-0.64□□□□□ -2.51
TMEM56-204ENST00000463375 CMTM5Q96DZ9 223 aa-0.64□□□□□ -2.51
TMEM56-204ENST00000463375 ZNF681Q96N22 645 aa-0.64□□□□□ -2.51
TMEM56-204ENST00000463375 ALG12Q9BV10 488 aa-0.64□□□□□ -2.51
TMEM56-204ENST00000463375 FAIM2Q9BWQ8 316 aa-0.64□□□□□ -2.51
TMEM56-204ENST00000463375 PARP12Q9H0J9 701 aaKnown RBP-0.64□□□□□ -2.51
TMEM56-204ENST00000463375 RAB17Q9H0T7 212 aa-0.64□□□□□ -2.51
TMEM56-204ENST00000463375 PALMDQ9NP74 551 aa-0.64□□□□□ -2.51
TMEM56-204ENST00000463375 C1orf123Q9NWV4 160 aa-0.64□□□□□ -2.51
TMEM56-204ENST00000463375 OPTCQ9UBM4 332 aa-0.64□□□□□ -2.51
TMEM56-204ENST00000463375 MAD2L2Q9UI95 211 aa-0.64□□□□□ -2.51
TMEM56-204ENST00000463375 FAM135BQ49AJ0 1406 aa-0.64□□□□□ -2.51
TMEM56-204ENST00000463375 MED12Q93074 2177 aa-0.64□□□□□ -2.51
TMEM56-204ENST00000463375 ZNF106Q9H2Y7 1883 aaKnown RBP-0.65□□□□□ -2.51
TMEM56-204ENST00000463375 PLXNA1Q9UIW2 1896 aa-0.65□□□□□ -2.51
TMEM56-204ENST00000463375 IQSEC2Q5JU85 1478 aa-0.65□□□□□ -2.51
TMEM56-204ENST00000463375 A0A087WSZ3 146 aa-0.65□□□□□ -2.51
TMEM56-204ENST00000463375 FAM74A7A6NL05 159 aa-0.65□□□□□ -2.51
TMEM56-204ENST00000463375 FAM25EA8MYX2 175 aa-0.65□□□□□ -2.51
TMEM56-204ENST00000463375 LYNX1G3V0Z9 82 aa-0.65□□□□□ -2.51
TMEM56-204ENST00000463375 DDX39AO00148 427 aaKnown RBP-0.65□□□□□ -2.51
TMEM56-204ENST00000463375 RASGRF2O14827 1237 aa-0.65□□□□□ -2.51
TMEM56-204ENST00000463375 SCAMP2O15127 329 aaKnown RBP-0.65□□□□□ -2.51
TMEM56-204ENST00000463375 P4HA2O15460 535 aa-0.65□□□□□ -2.51
TMEM56-204ENST00000463375 SGCEO43556 437 aa-0.65□□□□□ -2.51
TMEM56-204ENST00000463375 ATP6V1G1O75348 118 aa-0.65□□□□□ -2.51
TMEM56-204ENST00000463375 CNMDO75829 334 aa-0.65□□□□□ -2.51
TMEM56-204ENST00000463375 NEBLO76041 1014 aa-0.65□□□□□ -2.51
TMEM56-204ENST00000463375 CXCL14O95715 111 aa-0.65□□□□□ -2.51
TMEM56-204ENST00000463375 TGFAP01135 160 aa-0.65□□□□□ -2.51
TMEM56-204ENST00000463375 KLK3P07288 261 aaPredicted RBP-0.65□□□□□ -2.51
TMEM56-204ENST00000463375 HEXBP07686 556 aa-0.65□□□□□ -2.51
TMEM56-204ENST00000463375 CALB2P22676 271 aa-0.65□□□□□ -2.51
TMEM56-204ENST00000463375 ANXA13P27216 316 aa-0.65□□□□□ -2.51
TMEM56-204ENST00000463375 PSMB5P28074 263 aa-0.65□□□□□ -2.51
TMEM56-204ENST00000463375 EVX1P49640 407 aa-0.65□□□□□ -2.51
TMEM56-204ENST00000463375 SSTP61278 116 aa-0.65□□□□□ -2.51
TMEM56-204ENST00000463375 DEFA6Q01524 100 aa-0.65□□□□□ -2.51
TMEM56-204ENST00000463375 SPP2Q13103 211 aa-0.65□□□□□ -2.51
TMEM56-204ENST00000463375 SIM2Q14190 667 aaPredicted RBP-0.65□□□□□ -2.51
TMEM56-204ENST00000463375 SLC9A3R2Q15599 337 aa-0.65□□□□□ -2.51
TMEM56-204ENST00000463375 FAM74A3Q4VXF1 159 aa-0.65□□□□□ -2.51
TMEM56-204ENST00000463375 TMEM69Q5SWH9 247 aa-0.65□□□□□ -2.51
TMEM56-204ENST00000463375 FAM173BQ6P4H8 233 aa-0.65□□□□□ -2.51
TMEM56-204ENST00000463375 DLEU7Q6UYE1 221 aa-0.65□□□□□ -2.51
TMEM56-204ENST00000463375 ZNF493Q6ZR52 646 aa-0.65□□□□□ -2.51
TMEM56-204ENST00000463375 FP248Q71RG6 208 aaPredicted RBP-0.65□□□□□ -2.51
TMEM56-204ENST00000463375 SLC16A13Q7RTY0 426 aa-0.65□□□□□ -2.51
TMEM56-204ENST00000463375 ANKRD37Q7Z713 158 aa-0.65□□□□□ -2.51
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms