RNA–Protein interactions for RNA: ENST00000454542.5

HDAC4-205, Transcript of histone deacetylase 4, humanhuman

TSL 4

Gene HDAC4, Length 565 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-205ENST00000454542 ADIPOQQ15848 244 aa12.25□□□□□ -0.45
HDAC4-205ENST00000454542 SWI5Q1ZZU3 235 aa12.25□□□□□ -0.45
HDAC4-205ENST00000454542 MST1LQ2TV78 715 aa12.25□□□□□ -0.45
HDAC4-205ENST00000454542 Q5PR19 223 aa12.25□□□□□ -0.45
HDAC4-205ENST00000454542 SHEQ5VZ18 495 aa12.25□□□□□ -0.45
HDAC4-205ENST00000454542 CCDC121Q6ZUS5 278 aa12.25□□□□□ -0.45
HDAC4-205ENST00000454542 SYT9Q86SS6 491 aa12.25□□□□□ -0.45
HDAC4-205ENST00000454542 ZBTB46Q86UZ6 589 aa12.25□□□□□ -0.45
HDAC4-205ENST00000454542 TGIF2LYQ8IUE0 185 aa12.25□□□□□ -0.45
HDAC4-205ENST00000454542 LURAP1LQ8IV03 231 aa12.25□□□□□ -0.45
HDAC4-205ENST00000454542 FBXL14Q8N1E6 418 aa12.25□□□□□ -0.45
HDAC4-205ENST00000454542 LNX2Q8N448 690 aa12.25□□□□□ -0.45
HDAC4-205ENST00000454542 OR52L1Q8NGH7 329 aa12.25□□□□□ -0.45
HDAC4-205ENST00000454542 DDOQ99489 341 aa12.25□□□□□ -0.45
HDAC4-205ENST00000454542 IFT27Q9BW83 186 aa12.25□□□□□ -0.45
HDAC4-205ENST00000454542 NUAK2Q9H093 628 aa12.25□□□□□ -0.45
HDAC4-205ENST00000454542 ARMC1Q9NVT9 282 aa12.25□□□□□ -0.45
HDAC4-205ENST00000454542 REV1Q9UBZ9 1251 aa12.25□□□□□ -0.45
HDAC4-205ENST00000454542 ITPR3Q14573 2671 aa12.25□□□□□ -0.45
HDAC4-205ENST00000454542 F8P00451 2351 aa12.25□□□□□ -0.45
HDAC4-205ENST00000454542 A0A1W2PPL8 197 aa12.24□□□□□ -0.45
HDAC4-205ENST00000454542 H7C417 338 aa12.24□□□□□ -0.45
HDAC4-205ENST00000454542 ICMTO60725 284 aa12.24□□□□□ -0.45
HDAC4-205ENST00000454542 DEAF1O75398 565 aaPredicted RBP12.24□□□□□ -0.45
HDAC4-205ENST00000454542 KHDRBS3O75525 346 aaKnown RBP12.24□□□□□ -0.45
HDAC4-205ENST00000454542 NR4A1P22736 598 aa12.24□□□□□ -0.45
HDAC4-205ENST00000454542 ERFP50548 548 aa12.24□□□□□ -0.45
HDAC4-205ENST00000454542 SNTB2Q13425 540 aaKnown RBP12.24□□□□□ -0.45
HDAC4-205ENST00000454542 KCNMB1Q16558 191 aa12.24□□□□□ -0.45
HDAC4-205ENST00000454542 MSMPQ1L6U9 139 aa12.24□□□□□ -0.45
HDAC4-205ENST00000454542 CLEC12AQ5QGZ9 265 aa12.24□□□□□ -0.45
HDAC4-205ENST00000454542 ZNF362Q5T0B9 420 aaPredicted RBP12.24□□□□□ -0.45
HDAC4-205ENST00000454542 ARFGEF3Q5TH69 2177 aa12.24□□□□□ -0.45
HDAC4-205ENST00000454542 C1orf146Q5VVC0 180 aa12.24□□□□□ -0.45
HDAC4-205ENST00000454542 LEG1Q6P5S2 330 aa12.24□□□□□ -0.45
HDAC4-205ENST00000454542 SHQ1Q6PI26 577 aaKnown RBP12.24□□□□□ -0.45
HDAC4-205ENST00000454542 DNM1P34Q6PK57 102 aa12.24□□□□□ -0.45
HDAC4-205ENST00000454542 GLB1L2Q8IW92 636 aa12.24□□□□□ -0.45
HDAC4-205ENST00000454542 LRRC18Q8N456 261 aa12.24□□□□□ -0.45
HDAC4-205ENST00000454542 PAQR4Q8N4S7 273 aaPredicted RBP12.24□□□□□ -0.45
HDAC4-205ENST00000454542 NPEPL1Q8NDH3 523 aa12.24□□□□□ -0.45
HDAC4-205ENST00000454542 SLC30A7Q8NEW0 376 aa12.24□□□□□ -0.45
HDAC4-205ENST00000454542 WFDC11Q8NEX6 87 aa12.24□□□□□ -0.45
HDAC4-205ENST00000454542 SDR9C7Q8NEX9 313 aa12.24□□□□□ -0.45
HDAC4-205ENST00000454542 OR4Q3Q8NH05 313 aa12.24□□□□□ -0.45
HDAC4-205ENST00000454542 OR4K13Q8NH42 304 aa12.24□□□□□ -0.45
HDAC4-205ENST00000454542 GTPBP3Q969Y2 492 aaKnown RBP12.24□□□□□ -0.45
HDAC4-205ENST00000454542 NRBF2Q96F24 287 aa12.24□□□□□ -0.45
HDAC4-205ENST00000454542 PERPQ96FX8 193 aa12.24□□□□□ -0.45
HDAC4-205ENST00000454542 NMNAT3Q96T66 252 aa12.24□□□□□ -0.45
HDAC4-205ENST00000454542 FEVQ99581 238 aa12.24□□□□□ -0.45
HDAC4-205ENST00000454542 ZNF416Q9BWM5 594 aa12.24□□□□□ -0.45
HDAC4-205ENST00000454542 WNT5BQ9H1J7 359 aa12.24□□□□□ -0.45
HDAC4-205ENST00000454542 DLL4Q9NR61 685 aa12.24□□□□□ -0.45
HDAC4-205ENST00000454542 TBC1D23Q9NUY8 699 aa12.24□□□□□ -0.45
HDAC4-205ENST00000454542 BAIAP2Q9UQB8 552 aa12.24□□□□□ -0.45
HDAC4-205ENST00000454542 ARID1AO14497 2285 aa12.23□□□□□ -0.45
HDAC4-205ENST00000454542 USF3Q68DE3 2245 aa12.23□□□□□ -0.45
HDAC4-205ENST00000454542 OR6C68A6NDL8 312 aa12.23□□□□□ -0.45
HDAC4-205ENST00000454542 SLC16A7O60669 478 aa12.23□□□□□ -0.45
HDAC4-205ENST00000454542 TIPRLO75663 272 aa12.23□□□□□ -0.45
HDAC4-205ENST00000454542 SOX14O95416 240 aa12.23□□□□□ -0.45
HDAC4-205ENST00000454542 IGFBP1P08833 259 aaPredicted RBP12.23□□□□□ -0.45
HDAC4-205ENST00000454542 CRABP1P29762 137 aa12.23□□□□□ -0.45
HDAC4-205ENST00000454542 GLRXP35754 106 aa12.23□□□□□ -0.45
HDAC4-205ENST00000454542 CDKN1AP38936 164 aa12.23□□□□□ -0.45
HDAC4-205ENST00000454542 LSM6P62312 80 aaKnown RBP12.23□□□□□ -0.45
HDAC4-205ENST00000454542 PSG4Q00888 419 aa12.23□□□□□ -0.45
HDAC4-205ENST00000454542 KHDRBS1Q07666 443 aaKnown RBP eCLIP12.23□□□□□ -0.45
HDAC4-205ENST00000454542 DAG1Q14118 895 aa12.23□□□□□ -0.45
HDAC4-205ENST00000454542 ATP6AP1Q15904 470 aa12.23□□□□□ -0.45
HDAC4-205ENST00000454542 SGCAQ16586 387 aa12.23□□□□□ -0.45
HDAC4-205ENST00000454542 PABPC1L2AQ5JQF8 200 aa12.23□□□□□ -0.45
HDAC4-205ENST00000454542 UGT2A3Q6UWM9 527 aa12.23□□□□□ -0.45
HDAC4-205ENST00000454542 DNM1P46Q6ZS02 220 aa12.23□□□□□ -0.45
HDAC4-205ENST00000454542 JAZF1Q86VZ6 243 aa12.23□□□□□ -0.45
HDAC4-205ENST00000454542 HS3ST5Q8IZT8 346 aa12.23□□□□□ -0.45
HDAC4-205ENST00000454542 CPEB3Q8NE35 698 aaKnown RBP12.23□□□□□ -0.45
HDAC4-205ENST00000454542 TSSK2Q96PF2 358 aa12.23□□□□□ -0.45
HDAC4-205ENST00000454542 TMUB1Q9BVT8 246 aa12.23□□□□□ -0.45
HDAC4-205ENST00000454542 CACNG6Q9BXT2 260 aa12.23□□□□□ -0.45
HDAC4-205ENST00000454542 OR2H1Q9GZK4 316 aa12.23□□□□□ -0.45
HDAC4-205ENST00000454542 PLK3Q9H4B4 646 aa12.23□□□□□ -0.45
HDAC4-205ENST00000454542 EMC7Q9NPA0 242 aa12.23□□□□□ -0.45
HDAC4-205ENST00000454542 PDP1Q9P0J1 537 aaPredicted RBP12.23□□□□□ -0.45
HDAC4-205ENST00000454542 COA3Q9Y2R0 106 aaPredicted RBP12.23□□□□□ -0.45
HDAC4-205ENST00000454542 FKBP7Q9Y680 259 aa12.23□□□□□ -0.45
HDAC4-205ENST00000454542 B9A039 149 aa12.22□□□□□ -0.45
HDAC4-205ENST00000454542 EBAG9O00559 213 aa12.22□□□□□ -0.45
HDAC4-205ENST00000454542 GNGT2O14610 69 aa12.22□□□□□ -0.45
HDAC4-205ENST00000454542 GPRIN2O60269 458 aa12.22□□□□□ -0.45
HDAC4-205ENST00000454542 E2F6O75461 281 aa12.22□□□□□ -0.45
HDAC4-205ENST00000454542 RENP00797 406 aa12.22□□□□□ -0.45
HDAC4-205ENST00000454542 PTHP01270 115 aa12.22□□□□□ -0.45
HDAC4-205ENST00000454542 IGHV4-39P01824 125 aa12.22□□□□□ -0.45
HDAC4-205ENST00000454542 PCSK6P29122 969 aa12.22□□□□□ -0.45
HDAC4-205ENST00000454542 THBS4P35443 961 aa12.22□□□□□ -0.45
HDAC4-205ENST00000454542 ATP5J2P56134 94 aa12.22□□□□□ -0.45
HDAC4-205ENST00000454542 PCBD1P61457 104 aa12.22□□□□□ -0.45
HDAC4-205ENST00000454542 AQP6Q13520 282 aa12.22□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms