RNA–Protein interactions for RNA: ENST00000433297.2

HMGCS1-202, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene HMGCS1, Length 3,466 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-202ENST00000433297 PCDHGA1Q9Y5H4 931 aa10.46□□□□□ -0.73
HMGCS1-202ENST00000433297 TBC1D3DA0A087WVF3 549 aa10.46□□□□□ -0.74
HMGCS1-202ENST00000433297 TBC1D3IA0A087WXS9 549 aa10.46□□□□□ -0.74
HMGCS1-202ENST00000433297 OR4C45A6NMZ5 311 aa10.46□□□□□ -0.74
HMGCS1-202ENST00000433297 TBC1D3LB9A6J9 549 aa10.46□□□□□ -0.74
HMGCS1-202ENST00000433297 TBC1D3HP0C7X1 549 aa10.46□□□□□ -0.74
HMGCS1-202ENST00000433297 FAM53BQ14153 422 aa10.46□□□□□ -0.74
HMGCS1-202ENST00000433297 ELOCQ15369 112 aa10.46□□□□□ -0.74
HMGCS1-202ENST00000433297 NCMAPQ5T1S8 102 aa10.46□□□□□ -0.74
HMGCS1-202ENST00000433297 LINC01590Q5TEZ4 76 aa10.46□□□□□ -0.74
HMGCS1-202ENST00000433297 TBC1D3CQ6IPX1 549 aa10.46□□□□□ -0.74
HMGCS1-202ENST00000433297 LYG2Q86SG7 212 aa10.46□□□□□ -0.74
HMGCS1-202ENST00000433297 PARGQ86W56 976 aa10.46□□□□□ -0.74
HMGCS1-202ENST00000433297 C12orf40Q86WS4 652 aa10.46□□□□□ -0.74
HMGCS1-202ENST00000433297 SFTPA1Q8IWL2 248 aa10.46□□□□□ -0.74
HMGCS1-202ENST00000433297 TBC1D3Q8IZP1 549 aaPredicted RBP10.46□□□□□ -0.74
HMGCS1-202ENST00000433297 TRIM2Q9C040 744 aa10.46□□□□□ -0.74
HMGCS1-202ENST00000433297 CHRDQ9H2X0 955 aa10.46□□□□□ -0.74
HMGCS1-202ENST00000433297 MBNL1Q9NR56 388 aaKnown RBP10.46□□□□□ -0.74
HMGCS1-202ENST00000433297 PCOLCE2Q9UKZ9 415 aa10.46□□□□□ -0.74
HMGCS1-202ENST00000433297 C9orf170A2RU37 121 aa10.45□□□□□ -0.74
HMGCS1-202ENST00000433297 A6NLC8 198 aa10.45□□□□□ -0.74
HMGCS1-202ENST00000433297 EFCAB7A8K855 629 aa10.45□□□□□ -0.74
HMGCS1-202ENST00000433297 FGF16O43320 207 aa10.45□□□□□ -0.74
HMGCS1-202ENST00000433297 PRKNO60260 465 aaPredicted RBP10.45□□□□□ -0.74
HMGCS1-202ENST00000433297 MED6O75586 246 aa10.45□□□□□ -0.74
HMGCS1-202ENST00000433297 CT62P0C5K7 136 aa10.45□□□□□ -0.74
HMGCS1-202ENST00000433297 DPTQ07507 201 aa10.45□□□□□ -0.74
HMGCS1-202ENST00000433297 TDGQ13569 410 aa10.45□□□□□ -0.74
HMGCS1-202ENST00000433297 LPCAT3Q6P1A2 487 aa10.45□□□□□ -0.74
HMGCS1-202ENST00000433297 ULK3Q6PHR2 472 aa10.45□□□□□ -0.74
HMGCS1-202ENST00000433297 PAPD4Q6PIY7 484 aaKnown RBP10.45□□□□□ -0.74
HMGCS1-202ENST00000433297 SLC16A9Q7RTY1 509 aa10.45□□□□□ -0.74
HMGCS1-202ENST00000433297 TMEM229BQ8NBD8 167 aa10.45□□□□□ -0.74
HMGCS1-202ENST00000433297 DMBX1Q8NFW5 382 aa10.45□□□□□ -0.74
HMGCS1-202ENST00000433297 OR5T3Q8NGG3 340 aa10.45□□□□□ -0.74
HMGCS1-202ENST00000433297 FAM46BQ96A09 425 aa10.45□□□□□ -0.74
HMGCS1-202ENST00000433297 CMBLQ96DG6 245 aa10.45□□□□□ -0.74
HMGCS1-202ENST00000433297 PAPOLGQ9BWT3 736 aaKnown RBP10.45□□□□□ -0.74
HMGCS1-202ENST00000433297 C19orf53Q9UNZ5 99 aaPredicted RBP10.45□□□□□ -0.74
HMGCS1-202ENST00000433297 NOSIPQ9Y314 301 aaKnown RBP10.45□□□□□ -0.74
HMGCS1-202ENST00000433297 hCG_1809904A0A1W2PP81 198 aa10.45□□□□□ -0.74
HMGCS1-202ENST00000433297 A0A1W2PR64 198 aa10.45□□□□□ -0.74
HMGCS1-202ENST00000433297 A0A1W2PRV1 198 aa10.45□□□□□ -0.74
HMGCS1-202ENST00000433297 MANSC4A6NHS7 340 aaPredicted RBP10.45□□□□□ -0.74
HMGCS1-202ENST00000433297 FGF17O60258 216 aa10.45□□□□□ -0.74
HMGCS1-202ENST00000433297 SLC35G6P0C7Q6 338 aa10.45□□□□□ -0.74
HMGCS1-202ENST00000433297 CD79AP11912 226 aa10.45□□□□□ -0.74
HMGCS1-202ENST00000433297 CST5P28325 142 aaPredicted RBP10.45□□□□□ -0.74
HMGCS1-202ENST00000433297 ACAA2P42765 397 aaKnown RBP10.45□□□□□ -0.74
HMGCS1-202ENST00000433297 SPOCK1Q08629 439 aa10.45□□□□□ -0.74
HMGCS1-202ENST00000433297 POMZP3Q6PJE2 187 aa10.45□□□□□ -0.74
HMGCS1-202ENST00000433297 PRSS35Q8N3Z0 413 aa10.45□□□□□ -0.74
HMGCS1-202ENST00000433297 WDSUB1Q8N9V3 476 aa10.45□□□□□ -0.74
HMGCS1-202ENST00000433297 RRNAD1Q96FB5 475 aaKnown RBP10.45□□□□□ -0.74
HMGCS1-202ENST00000433297 GSKIPQ9P0R6 139 aa10.45□□□□□ -0.74
HMGCS1-202ENST00000433297 TRBV5-5A0A0J9YX44 114 aa10.45□□□□□ -0.74
HMGCS1-202ENST00000433297 A0A1W2PPC1 479 aa10.45□□□□□ -0.74
HMGCS1-202ENST00000433297 PRRT4C9JH25 899 aa10.45□□□□□ -0.74
HMGCS1-202ENST00000433297 B3GALT2O43825 422 aa10.45□□□□□ -0.74
HMGCS1-202ENST00000433297 BRINP1O60477 761 aa10.45□□□□□ -0.74
HMGCS1-202ENST00000433297 CD74P04233 296 aa10.45□□□□□ -0.74
HMGCS1-202ENST00000433297 CD1CP29017 333 aa10.45□□□□□ -0.74
HMGCS1-202ENST00000433297 GRK6P43250 576 aa10.45□□□□□ -0.74
HMGCS1-202ENST00000433297 CLINT1Q14677 625 aa10.45□□□□□ -0.74
HMGCS1-202ENST00000433297 CEBPEQ15744 281 aa10.45□□□□□ -0.74
HMGCS1-202ENST00000433297 WDR38Q5JTN6 314 aa10.45□□□□□ -0.74
HMGCS1-202ENST00000433297 SLC35D3Q5M8T2 416 aa10.45□□□□□ -0.74
HMGCS1-202ENST00000433297 PRSS41Q7RTY9 318 aa10.45□□□□□ -0.74
HMGCS1-202ENST00000433297 BHLHE23Q8NDY6 225 aa10.45□□□□□ -0.74
HMGCS1-202ENST00000433297 EDAQ92838 391 aa10.45□□□□□ -0.74
HMGCS1-202ENST00000433297 AMELYQ99218 206 aa10.45□□□□□ -0.74
HMGCS1-202ENST00000433297 ELF4Q99607 663 aaPredicted RBP10.45□□□□□ -0.74
HMGCS1-202ENST00000433297 MSGN1A6NI15 193 aa10.44□□□□□ -0.74
HMGCS1-202ENST00000433297 IFNA6P05013 189 aa10.44□□□□□ -0.74
HMGCS1-202ENST00000433297 PEBP1P30086 187 aaKnown RBP10.44□□□□□ -0.74
HMGCS1-202ENST00000433297 ERN2Q76MJ5 926 aaKnown RBP10.44□□□□□ -0.74
HMGCS1-202ENST00000433297 VN1R4Q7Z5H5 301 aa10.44□□□□□ -0.74
HMGCS1-202ENST00000433297 SLC39A11Q8N1S5 342 aa10.44□□□□□ -0.74
HMGCS1-202ENST00000433297 MFSD9Q8NBP5 474 aa10.44□□□□□ -0.74
HMGCS1-202ENST00000433297 KREMEN2Q8NCW0 462 aa10.44□□□□□ -0.74
HMGCS1-202ENST00000433297 OR2L8Q8NGY9 312 aa10.44□□□□□ -0.74
HMGCS1-202ENST00000433297 HIST1H2BAQ96A08 127 aa10.44□□□□□ -0.74
HMGCS1-202ENST00000433297 NECAB3Q96P71 396 aaPredicted RBP10.44□□□□□ -0.74
HMGCS1-202ENST00000433297 ELOVL3Q9HB03 270 aa10.44□□□□□ -0.74
HMGCS1-202ENST00000433297 KLK13Q9UKR3 277 aa10.44□□□□□ -0.74
HMGCS1-202ENST00000433297 SNRNP200O75643 2136 aaKnown RBP10.44□□□□□ -0.74
HMGCS1-202ENST00000433297 METTL21EPA6NDL7 271 aa10.44□□□□□ -0.74
HMGCS1-202ENST00000433297 C9JQL5 133 aa10.44□□□□□ -0.74
HMGCS1-202ENST00000433297 LRP3O75074 770 aa10.44□□□□□ -0.74
HMGCS1-202ENST00000433297 STK17BO94768 372 aa10.44□□□□□ -0.74
HMGCS1-202ENST00000433297 EFEMP2O95967 443 aa10.44□□□□□ -0.74
HMGCS1-202ENST00000433297 CD2P06729 351 aa10.44□□□□□ -0.74
HMGCS1-202ENST00000433297 RPS4Y1P22090 263 aaKnown RBP10.44□□□□□ -0.74
HMGCS1-202ENST00000433297 ZBTB25P24278 435 aa10.44□□□□□ -0.74
HMGCS1-202ENST00000433297 HTR2CP28335 458 aa10.44□□□□□ -0.74
HMGCS1-202ENST00000433297 WASP42768 502 aa10.44□□□□□ -0.74
HMGCS1-202ENST00000433297 PMPCAQ10713 525 aa10.44□□□□□ -0.74
HMGCS1-202ENST00000433297 SRSF5Q13243 272 aaKnown RBP10.44□□□□□ -0.74
HMGCS1-202ENST00000433297 EBPQ15125 230 aaKnown RBP10.44□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms