RNA–Protein interactions for RNA: ENST00000426246.2

USP42-203, Transcript of ubiquitin specific peptidase 42, humanhuman

TSL 2

Gene USP42, Length 3,611 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP42-203ENST00000426246 ATP6V1G2-DDX39BF2Z307 99 aa12.09□□□□□ -0.47
USP42-203ENST00000426246 ALOX12BO75342 701 aa12.09□□□□□ -0.47
USP42-203ENST00000426246 HLA-AP01891 365 aaKnown RBP12.09□□□□□ -0.47
USP42-203ENST00000426246 GP1BBP13224 206 aa12.09□□□□□ -0.47
USP42-203ENST00000426246 SLC6A9P48067 706 aa12.09□□□□□ -0.47
USP42-203ENST00000426246 KLF9Q13886 244 aaPredicted RBP12.09□□□□□ -0.47
USP42-203ENST00000426246 PRAMEF8Q5VWM4 474 aa12.09□□□□□ -0.47
USP42-203ENST00000426246 PRAMEF7Q5VXH5 474 aa12.09□□□□□ -0.47
USP42-203ENST00000426246 RNLSQ5VYX0 342 aa12.09□□□□□ -0.47
USP42-203ENST00000426246 KCTD20Q7Z5Y7 419 aa12.09□□□□□ -0.47
USP42-203ENST00000426246 OR10H5Q8NGA6 315 aa12.09□□□□□ -0.47
USP42-203ENST00000426246 BANF2Q9H503 90 aa12.09□□□□□ -0.47
USP42-203ENST00000426246 UBQLN4Q9NRR5 601 aa12.09□□□□□ -0.47
USP42-203ENST00000426246 FOXJ3Q9UPW0 622 aa12.09□□□□□ -0.47
USP42-203ENST00000426246 A0A087WUJ7 227 aa12.08□□□□□ -0.48
USP42-203ENST00000426246 NKX2-2O95096 273 aa12.08□□□□□ -0.48
USP42-203ENST00000426246 WNT11O96014 354 aa12.08□□□□□ -0.48
USP42-203ENST00000426246 ITGA5P08648 1049 aa12.08□□□□□ -0.48
USP42-203ENST00000426246 LUMP51884 338 aaPredicted RBP12.08□□□□□ -0.48
USP42-203ENST00000426246 OR1D5P58170 312 aa12.08□□□□□ -0.48
USP42-203ENST00000426246 SEZ6L2Q6UXD5 910 aa12.08□□□□□ -0.48
USP42-203ENST00000426246 TOR1AIP2Q8NFQ8 470 aa12.08□□□□□ -0.48
USP42-203ENST00000426246 ZNF417Q8TAU3 575 aa12.08□□□□□ -0.48
USP42-203ENST00000426246 ZC3HAV1LQ96H79 300 aaKnown RBP12.08□□□□□ -0.48
USP42-203ENST00000426246 KLHL15Q96M94 604 aa12.08□□□□□ -0.48
USP42-203ENST00000426246 ZNF587Q96SQ5 575 aaPredicted RBP12.08□□□□□ -0.48
USP42-203ENST00000426246 KCNN3Q9UGI6 736 aa12.08□□□□□ -0.48
USP42-203ENST00000426246 MRPS17Q9Y2R5 130 aaKnown RBP12.08□□□□□ -0.48
USP42-203ENST00000426246 OR2AT4A6NND4 320 aa12.08□□□□□ -0.48
USP42-203ENST00000426246 GABARAPH6UMI1 98 aa12.08□□□□□ -0.48
USP42-203ENST00000426246 K7ESF4 209 aa12.08□□□□□ -0.48
USP42-203ENST00000426246 PPM1BO75688 479 aa12.08□□□□□ -0.48
USP42-203ENST00000426246 VSIG10L2P0DP72 767 aa12.08□□□□□ -0.48
USP42-203ENST00000426246 PGAM2P15259 253 aa12.08□□□□□ -0.48
USP42-203ENST00000426246 MRGPREQ86SM8 312 aa12.08□□□□□ -0.48
USP42-203ENST00000426246 DND1Q8IYX4 353 aaKnown RBP12.08□□□□□ -0.48
USP42-203ENST00000426246 OR14A16Q8NHC5 309 aa12.08□□□□□ -0.48
USP42-203ENST00000426246 C8orf44Q96CB5 159 aa12.08□□□□□ -0.48
USP42-203ENST00000426246 TM4SF19Q96DZ7 209 aa12.08□□□□□ -0.48
USP42-203ENST00000426246 GFI1Q99684 422 aa12.08□□□□□ -0.48
USP42-203ENST00000426246 ADAT1Q9BUB4 502 aaKnown RBP12.08□□□□□ -0.48
USP42-203ENST00000426246 PDE7BQ9NP56 450 aa12.08□□□□□ -0.48
USP42-203ENST00000426246 COPZ2Q9P299 210 aa12.08□□□□□ -0.48
USP42-203ENST00000426246 PRODH2Q9UF12 536 aa12.08□□□□□ -0.48
USP42-203ENST00000426246 MEIKINA0A087WXM9 373 aa12.07□□□□□ -0.48
USP42-203ENST00000426246 TMEM269A0A1B0GVZ9 245 aa12.07□□□□□ -0.48
USP42-203ENST00000426246 LPLP06858 475 aa12.07□□□□□ -0.48
USP42-203ENST00000426246 CD27P26842 260 aa12.07□□□□□ -0.48
USP42-203ENST00000426246 PRPS1P60891 318 aa12.07□□□□□ -0.48
USP42-203ENST00000426246 ARFRP1Q13795 201 aa12.07□□□□□ -0.48
USP42-203ENST00000426246 SLC9A3R2Q15599 337 aa12.07□□□□□ -0.48
USP42-203ENST00000426246 BPIFB2Q8N4F0 458 aa12.07□□□□□ -0.48
USP42-203ENST00000426246 CADM4Q8NFZ8 388 aa12.07□□□□□ -0.48
USP42-203ENST00000426246 FGGYQ96C11 551 aa12.07□□□□□ -0.48
USP42-203ENST00000426246 ZNF75AQ96N20 296 aa12.07□□□□□ -0.48
USP42-203ENST00000426246 TSPAN32Q96QS1 320 aa12.07□□□□□ -0.48
USP42-203ENST00000426246 STACQ99469 402 aa12.07□□□□□ -0.48
USP42-203ENST00000426246 IFT46Q9NQC8 304 aa12.07□□□□□ -0.48
USP42-203ENST00000426246 MRTO4Q9UKD2 239 aaKnown RBP12.07□□□□□ -0.48
USP42-203ENST00000426246 PCDHGA9Q9Y5G4 932 aaKnown RBP12.07□□□□□ -0.48
USP42-203ENST00000426246 FAM221BA6H8Z2 402 aa12.07□□□□□ -0.48
USP42-203ENST00000426246 PNPP00491 289 aa12.07□□□□□ -0.48
USP42-203ENST00000426246 GIMD1P0DJR0 217 aa12.07□□□□□ -0.48
USP42-203ENST00000426246 S1PR1P21453 382 aa12.07□□□□□ -0.48
USP42-203ENST00000426246 MGAT2Q10469 447 aa12.07□□□□□ -0.48
USP42-203ENST00000426246 COL28A1Q2UY09 1125 aa12.07□□□□□ -0.48
USP42-203ENST00000426246 MESTQ5EB52 335 aa12.07□□□□□ -0.48
USP42-203ENST00000426246 WBP2NLQ6ICG8 309 aa12.07□□□□□ -0.48
USP42-203ENST00000426246 STEAP1BQ6NZ63 245 aa12.07□□□□□ -0.48
USP42-203ENST00000426246 TSSK4Q6SA08 328 aa12.07□□□□□ -0.48
USP42-203ENST00000426246 SPEM1Q8N4L4 309 aa12.07□□□□□ -0.48
USP42-203ENST00000426246 PMM1Q92871 262 aa12.07□□□□□ -0.48
USP42-203ENST00000426246 SELENOIQ9C0D9 397 aa12.07□□□□□ -0.48
USP42-203ENST00000426246 INPP5EQ9NRR6 644 aa12.07□□□□□ -0.48
USP42-203ENST00000426246 KLRF1Q9NZS2 232 aa12.07□□□□□ -0.48
USP42-203ENST00000426246 EPHA6Q9UF33 1036 aa12.07□□□□□ -0.48
USP42-203ENST00000426246 CTLA4P16410 223 aa12.07□□□□□ -0.48
USP42-203ENST00000426246 RPL35P42766 123 aaKnown RBP12.07□□□□□ -0.48
USP42-203ENST00000426246 H2BFSP57053 126 aa12.07□□□□□ -0.48
USP42-203ENST00000426246 S100A10P60903 97 aa12.07□□□□□ -0.48
USP42-203ENST00000426246 TMUB2Q71RG4 321 aa12.07□□□□□ -0.48
USP42-203ENST00000426246 DCXRQ7Z4W1 244 aa12.07□□□□□ -0.48
USP42-203ENST00000426246 STPG2Q8N412 459 aa12.07□□□□□ -0.48
USP42-203ENST00000426246 SPERTQ8NA61 448 aa12.07□□□□□ -0.48
USP42-203ENST00000426246 STEAP2Q8NFT2 490 aa12.07□□□□□ -0.48
USP42-203ENST00000426246 OR6M1Q8NGM8 313 aa12.07□□□□□ -0.48
USP42-203ENST00000426246 VSTM2LQ96N03 204 aa12.07□□□□□ -0.48
USP42-203ENST00000426246 ACKR4Q9NPB9 350 aa12.07□□□□□ -0.48
USP42-203ENST00000426246 ASF1BQ9NVP2 202 aa12.07□□□□□ -0.48
USP42-203ENST00000426246 COPS7AQ9UBW8 275 aa12.07□□□□□ -0.48
USP42-203ENST00000426246 NPIPA5E9PKD4 350 aa12.06□□□□□ -0.48
USP42-203ENST00000426246 TRIM3O75382 744 aaPredicted RBP12.06□□□□□ -0.48
USP42-203ENST00000426246 AHSA1O95433 338 aa12.06□□□□□ -0.48
USP42-203ENST00000426246 ECDO95905 644 aaPredicted RBP12.06□□□□□ -0.48
USP42-203ENST00000426246 F10P00742 488 aa12.06□□□□□ -0.48
USP42-203ENST00000426246 ITGA3P26006 1051 aa12.06□□□□□ -0.48
USP42-203ENST00000426246 MFGE8Q08431 387 aaPredicted RBP12.06□□□□□ -0.48
USP42-203ENST00000426246 INPP5JQ15735 1006 aaPredicted RBP12.06□□□□□ -0.48
USP42-203ENST00000426246 PRAMEF20Q5VT98 475 aa12.06□□□□□ -0.48
USP42-203ENST00000426246 RAB12Q6IQ22 244 aa12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 64 ms