RNA–Protein interactions for RNA: ENST00000397397.6

TSPAN4-203, Transcript of tetraspanin 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSPAN4, Length 1,423 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-203ENST00000397397 ZNF511Q8NB15 262 aa20.69■□□□□ 0.9
TSPAN4-203ENST00000397397 STEAP2Q8NFT2 490 aa20.69■□□□□ 0.9
TSPAN4-203ENST00000397397 SLC26A10Q8NG04 563 aa20.69■□□□□ 0.9
TSPAN4-203ENST00000397397 APH1BQ8WW43 257 aa20.69■□□□□ 0.9
TSPAN4-203ENST00000397397 C11orf40Q8WZ69 217 aa20.69■□□□□ 0.9
TSPAN4-203ENST00000397397 RFKQ969G6 155 aa20.69■□□□□ 0.9
TSPAN4-203ENST00000397397 TEAD3Q99594 435 aa20.69■□□□□ 0.9
TSPAN4-203ENST00000397397 SIAEQ9HAT2 523 aa20.69■□□□□ 0.9
TSPAN4-203ENST00000397397 EMC7Q9NPA0 242 aa20.69■□□□□ 0.9
TSPAN4-203ENST00000397397 SLC22A31A6NKX4 558 aa20.68■□□□□ 0.9
TSPAN4-203ENST00000397397 GSTT1P30711 240 aa20.68■□□□□ 0.9
TSPAN4-203ENST00000397397 TEKQ02763 1124 aa20.68■□□□□ 0.9
TSPAN4-203ENST00000397397 MEP1BQ16820 701 aa20.68■□□□□ 0.9
TSPAN4-203ENST00000397397 TBRG1Q3YBR2 411 aa20.68■□□□□ 0.9
TSPAN4-203ENST00000397397 NRN1LQ496H8 165 aa20.68■□□□□ 0.9
TSPAN4-203ENST00000397397 LRRC18Q8N456 261 aa20.68■□□□□ 0.9
TSPAN4-203ENST00000397397 OR10H5Q8NGA6 315 aa20.68■□□□□ 0.9
TSPAN4-203ENST00000397397 S100PBPQ96BU1 408 aa20.68■□□□□ 0.9
TSPAN4-203ENST00000397397 CNBD2Q96M20 576 aa20.68■□□□□ 0.9
TSPAN4-203ENST00000397397 SH3GL3Q99963 347 aa20.68■□□□□ 0.9
TSPAN4-203ENST00000397397 HCFC1P51610 2035 aa20.67■□□□□ 0.9
TSPAN4-203ENST00000397397 WBP4O75554 376 aaKnown RBP20.67■□□□□ 0.9
TSPAN4-203ENST00000397397 TFP02787 698 aa20.67■□□□□ 0.9
TSPAN4-203ENST00000397397 GRNP28799 593 aaKnown RBP20.67■□□□□ 0.9
TSPAN4-203ENST00000397397 HTR1FP30939 366 aa20.67■□□□□ 0.9
TSPAN4-203ENST00000397397 HOXC12P31275 282 aa20.67■□□□□ 0.9
TSPAN4-203ENST00000397397 CCKARP32238 428 aa20.67■□□□□ 0.9
TSPAN4-203ENST00000397397 CDK5R2Q13319 367 aa20.67■□□□□ 0.9
TSPAN4-203ENST00000397397 KCNMB1Q16558 191 aa20.67■□□□□ 0.9
TSPAN4-203ENST00000397397 FAM27BQ5VT28 67 aa20.67■□□□□ 0.9
TSPAN4-203ENST00000397397 UGT2A3Q6UWM9 527 aa20.67■□□□□ 0.9
TSPAN4-203ENST00000397397 SKA3Q8IX90 412 aa20.67■□□□□ 0.9
TSPAN4-203ENST00000397397 ACTR6Q9GZN1 396 aa20.67■□□□□ 0.9
TSPAN4-203ENST00000397397 MRPL22Q9NWU5 206 aaKnown RBP20.67■□□□□ 0.9
TSPAN4-203ENST00000397397 WARS2Q9UGM6 360 aaKnown RBP20.67■□□□□ 0.9
TSPAN4-203ENST00000397397 CACNA1CQ13936 2221 aa20.66■□□□□ 0.9
TSPAN4-203ENST00000397397 SH3D21A4FU49 640 aa20.66■□□□□ 0.9
TSPAN4-203ENST00000397397 SNTNA6NMZ2 147 aa20.66■□□□□ 0.9
TSPAN4-203ENST00000397397 ZNF823P16415 610 aa20.66■□□□□ 0.9
TSPAN4-203ENST00000397397 CAPZA2P47755 286 aa20.66■□□□□ 0.9
TSPAN4-203ENST00000397397 NUDT6P53370 316 aa20.66■□□□□ 0.9
TSPAN4-203ENST00000397397 SLC16A14Q7RTX9 510 aa20.66■□□□□ 0.9
TSPAN4-203ENST00000397397 C17orf78Q8N4C9 275 aa20.66■□□□□ 0.9
TSPAN4-203ENST00000397397 FBLIM1Q8WUP2 373 aa20.66■□□□□ 0.9
TSPAN4-203ENST00000397397 BOD1Q96IK1 185 aa20.66■□□□□ 0.9
TSPAN4-203ENST00000397397 OR10A4Q9H209 315 aa20.66■□□□□ 0.9
TSPAN4-203ENST00000397397 KCNN2Q9H2S1 579 aa20.66■□□□□ 0.9
TSPAN4-203ENST00000397397 SLC17A5Q9NRA2 495 aa20.66■□□□□ 0.9
TSPAN4-203ENST00000397397 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP20.66■□□□□ 0.92e-6■■■■□ 25.9
TSPAN4-203ENST00000397397 POLR1DQ9Y2S0 133 aa20.66■□□□□ 0.9
TSPAN4-203ENST00000397397 COL12A1Q99715 3063 aa20.66■□□□□ 0.9
TSPAN4-203ENST00000397397 OR5H1A6NKK0 313 aa20.65■□□□□ 0.9
TSPAN4-203ENST00000397397 HRGP04196 525 aa20.65■□□□□ 0.9
TSPAN4-203ENST00000397397 HOXB1P14653 301 aaPredicted RBP20.65■□□□□ 0.9
TSPAN4-203ENST00000397397 UBE2NP61088 152 aaKnown RBP20.65■□□□□ 0.9
TSPAN4-203ENST00000397397 SMN1Q16637 294 aaKnown RBP20.65■□□□□ 0.9
TSPAN4-203ENST00000397397 ERI1Q8IV48 349 aaKnown RBP20.65■□□□□ 0.9
TSPAN4-203ENST00000397397 INTS14Q96SY0 518 aa20.65■□□□□ 0.9
TSPAN4-203ENST00000397397 ZNF416Q9BWM5 594 aa20.65■□□□□ 0.9
TSPAN4-203ENST00000397397 WDR76Q9H967 626 aa20.65■□□□□ 0.9
TSPAN4-203ENST00000397397 COMMD3-BMI1R4GMX3 469 aa20.65■□□□□ 0.9
TSPAN4-203ENST00000397397 DOPEY2Q9Y3R5 2298 aa20.64■□□□□ 0.9
TSPAN4-203ENST00000397397 A0A1W2PR80 420 aa20.64■□□□□ 0.89
TSPAN4-203ENST00000397397 DENRO43583 198 aaKnown RBP20.64■□□□□ 0.89
TSPAN4-203ENST00000397397 CST2P09228 141 aa20.64■□□□□ 0.89
TSPAN4-203ENST00000397397 LSM6P62312 80 aaKnown RBP20.64■□□□□ 0.89
TSPAN4-203ENST00000397397 TUBA1BP68363 451 aa20.64■□□□□ 0.89
TSPAN4-203ENST00000397397 TUBA4AP68366 448 aa20.64■□□□□ 0.89
TSPAN4-203ENST00000397397 ADAM8P78325 824 aa20.64■□□□□ 0.89
TSPAN4-203ENST00000397397 TMED1Q13445 227 aa20.64■□□□□ 0.89
TSPAN4-203ENST00000397397 ENDOGQ14249 297 aaKnown RBP20.64■□□□□ 0.89
TSPAN4-203ENST00000397397 KRT80Q6KB66 452 aa20.64■□□□□ 0.89
TSPAN4-203ENST00000397397 TUBA1AQ71U36 451 aa20.64■□□□□ 0.89
TSPAN4-203ENST00000397397 WDR31Q8NA23 367 aa20.64■□□□□ 0.89
TSPAN4-203ENST00000397397 OR52N5Q8NH56 324 aa20.64■□□□□ 0.89
TSPAN4-203ENST00000397397 USB1Q9BQ65 265 aaKnown RBP20.64■□□□□ 0.89
TSPAN4-203ENST00000397397 CDADC1Q9BWV3 514 aa20.64■□□□□ 0.89
TSPAN4-203ENST00000397397 MARCH7Q9H992 704 aa20.64■□□□□ 0.89
TSPAN4-203ENST00000397397 NPDC1Q9NQX5 325 aaPredicted RBP20.64■□□□□ 0.89
TSPAN4-203ENST00000397397 ASH1LQ9NR48 2969 aaKnown RBP20.63■□□□□ 0.89
TSPAN4-203ENST00000397397 C12orf71A8MTZ7 269 aa20.63■□□□□ 0.89
TSPAN4-203ENST00000397397 SELENOFO60613 162 aa20.63■□□□□ 0.89
TSPAN4-203ENST00000397397 HLA-HP01893 362 aa20.63■□□□□ 0.89
TSPAN4-203ENST00000397397 MRPL3P09001 348 aaKnown RBP20.63■□□□□ 0.89
TSPAN4-203ENST00000397397 PATE4P0C8F1 98 aa20.63■□□□□ 0.89
TSPAN4-203ENST00000397397 CD79AP11912 226 aa20.63■□□□□ 0.89
TSPAN4-203ENST00000397397 NAA10P41227 235 aaPredicted RBP20.63■□□□□ 0.89
TSPAN4-203ENST00000397397 ENTPD1P49961 510 aa20.63■□□□□ 0.89
TSPAN4-203ENST00000397397 SORDQ00796 357 aa20.63■□□□□ 0.89
TSPAN4-203ENST00000397397 GGTLC2Q14390 218 aa20.63■□□□□ 0.89
TSPAN4-203ENST00000397397 TIMM23BQ5SRD1 257 aa20.63■□□□□ 0.89
TSPAN4-203ENST00000397397 P2RY8Q86VZ1 359 aa20.63■□□□□ 0.89
TSPAN4-203ENST00000397397 TIGD4Q8IY51 512 aa20.63■□□□□ 0.89
TSPAN4-203ENST00000397397 CCDC36Q8IYA8 594 aa20.63■□□□□ 0.89
TSPAN4-203ENST00000397397 NANOS1Q8WY41 292 aaKnown RBP20.63■□□□□ 0.89
TSPAN4-203ENST00000397397 AMBNQ9NP70 447 aa20.63■□□□□ 0.89
TSPAN4-203ENST00000397397 CCNB1IP1Q9NPC3 277 aa20.63■□□□□ 0.89
TSPAN4-203ENST00000397397 HAO2Q9NYQ3 351 aa20.63■□□□□ 0.89
TSPAN4-203ENST00000397397 AMDHD2Q9Y303 409 aa20.63■□□□□ 0.89
TSPAN4-203ENST00000397397 ARPC4-TTLL3A0A0A6YYG9 625 aa20.62■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms