RNA–Protein interactions for RNA: ENST00000382723.4

MSX1-201, Transcript of msh homeobox 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSX1, Length 1,939 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSX1-201ENST00000382723 HRGP04196 525 aa23.71■■□□□ 1.39
MSX1-201ENST00000382723 YES1P07947 543 aa23.71■■□□□ 1.39
MSX1-201ENST00000382723 CELP19835 753 aa23.71■■□□□ 1.39
MSX1-201ENST00000382723 ACSM1Q08AH1 577 aa23.71■■□□□ 1.39
MSX1-201ENST00000382723 CTF1Q16619 201 aa23.71■■□□□ 1.39
MSX1-201ENST00000382723 C10orf128Q5T292 105 aa23.71■■□□□ 1.39
MSX1-201ENST00000382723 SLC18B1Q6NT16 456 aa23.71■■□□□ 1.39
MSX1-201ENST00000382723 PLEKHG7Q6ZR37 379 aa23.71■■□□□ 1.39
MSX1-201ENST00000382723 SYS1Q8N2H4 156 aa23.71■■□□□ 1.39
MSX1-201ENST00000382723 ZNF837Q96EG3 531 aaPredicted RBP23.71■■□□□ 1.39
MSX1-201ENST00000382723 ALKBH3Q96Q83 286 aaPredicted RBP23.71■■□□□ 1.39
MSX1-201ENST00000382723 MYCBPQ99417 103 aaPredicted RBP23.71■■□□□ 1.39
MSX1-201ENST00000382723 ZNF724A8MTY0 619 aa23.71■■□□□ 1.39
MSX1-201ENST00000382723 AIREO43918 545 aa23.71■■□□□ 1.39
MSX1-201ENST00000382723 IGHV3-9P01782 118 aa23.71■■□□□ 1.39
MSX1-201ENST00000382723 OR8G3PP0DMU2 310 aa23.71■■□□□ 1.39
MSX1-201ENST00000382723 EDNRAP25101 427 aa23.71■■□□□ 1.39
MSX1-201ENST00000382723 TPBGQ13641 420 aa23.71■■□□□ 1.39
MSX1-201ENST00000382723 SGCAQ16586 387 aa23.71■■□□□ 1.39
MSX1-201ENST00000382723 CORO6Q6QEF8 472 aa23.71■■□□□ 1.39
MSX1-201ENST00000382723 SPATC1Q76KD6 591 aa23.71■■□□□ 1.39
MSX1-201ENST00000382723 FGD2Q7Z6J4 655 aa23.71■■□□□ 1.39
MSX1-201ENST00000382723 CISD2Q8N5K1 135 aaKnown RBP23.71■■□□□ 1.39
MSX1-201ENST00000382723 PELI1Q96FA3 418 aa23.71■■□□□ 1.39
MSX1-201ENST00000382723 CRLF2Q9HC73 371 aa23.71■■□□□ 1.39
MSX1-201ENST00000382723 NDUFB11Q9NX14 153 aa23.71■■□□□ 1.39
MSX1-201ENST00000382723 SIRT4Q9Y6E7 314 aaPredicted RBP23.71■■□□□ 1.39
MSX1-201ENST00000382723 PRRC2CQ9Y520 2896 aaKnown RBP23.7■■□□□ 1.39
MSX1-201ENST00000382723 LOC100506127A0A0U1RQW1 187 aa23.7■■□□□ 1.38
MSX1-201ENST00000382723 ATE1O95260 518 aa23.7■■□□□ 1.38
MSX1-201ENST00000382723 ZNF133P52736 654 aaPredicted RBP23.7■■□□□ 1.38
MSX1-201ENST00000382723 ZNF684Q5T5D7 378 aa23.7■■□□□ 1.38
MSX1-201ENST00000382723 TMEM203Q969S6 136 aa23.7■■□□□ 1.38
MSX1-201ENST00000382723 PARPBPQ9NWS1 579 aa23.7■■□□□ 1.38
MSX1-201ENST00000382723 MRM2Q9UI43 246 aaKnown RBP23.7■■□□□ 1.38
MSX1-201ENST00000382723 OR14I1A6ND48 311 aa23.69■■□□□ 1.38
MSX1-201ENST00000382723 PHYHO14832 338 aa23.69■■□□□ 1.38
MSX1-201ENST00000382723 FCGR2AP12318 317 aa23.69■■□□□ 1.38
MSX1-201ENST00000382723 PSMB10P40306 273 aa23.69■■□□□ 1.38
MSX1-201ENST00000382723 GUCA1AP43080 201 aaPredicted RBP23.69■■□□□ 1.38
MSX1-201ENST00000382723 ZNF585AQ6P3V2 769 aa23.69■■□□□ 1.38
MSX1-201ENST00000382723 C19orf48Q6RUI8 117 aa23.69■■□□□ 1.38
MSX1-201ENST00000382723 ADGRE4PQ86SQ3 457 aa23.69■■□□□ 1.38
MSX1-201ENST00000382723 YIPF7Q8N8F6 280 aa23.69■■□□□ 1.38
MSX1-201ENST00000382723 CHCHD6Q9BRQ6 235 aa23.69■■□□□ 1.38
MSX1-201ENST00000382723 TTYH2Q9BSA4 534 aa23.69■■□□□ 1.38
MSX1-201ENST00000382723 ABHD6Q9BV23 337 aa23.69■■□□□ 1.38
MSX1-201ENST00000382723 RNF122Q9H9V4 155 aa23.69■■□□□ 1.38
MSX1-201ENST00000382723 B3GAT2Q9NPZ5 323 aa23.69■■□□□ 1.38
MSX1-201ENST00000382723 POLE4Q9NR33 117 aa23.69■■□□□ 1.38
MSX1-201ENST00000382723 CLCF1Q9UBD9 225 aa23.69■■□□□ 1.38
MSX1-201ENST00000382723 POLR1DQ9Y2S0 133 aa23.69■■□□□ 1.38
MSX1-201ENST00000382723 CHD8Q9HCK8 2581 aa23.69■■□□□ 1.38
MSX1-201ENST00000382723 KRT33AO76009 404 aa23.69■■□□□ 1.38
MSX1-201ENST00000382723 KRT8P05787 483 aa23.69■■□□□ 1.38
MSX1-201ENST00000382723 ZNF84P51523 738 aa23.69■■□□□ 1.38
MSX1-201ENST00000382723 GBX2P52951 348 aaPredicted RBP23.69■■□□□ 1.38
MSX1-201ENST00000382723 VBP1P61758 197 aa23.69■■□□□ 1.38
MSX1-201ENST00000382723 BDH1Q02338 343 aa23.69■■□□□ 1.38
MSX1-201ENST00000382723 TEX30Q5JUR7 227 aa23.69■■□□□ 1.38
MSX1-201ENST00000382723 LINGO2Q7L985 606 aa23.69■■□□□ 1.38
MSX1-201ENST00000382723 FAM220AQ7Z4H9 259 aa23.69■■□□□ 1.38
MSX1-201ENST00000382723 DCXRQ7Z4W1 244 aa23.69■■□□□ 1.38
MSX1-201ENST00000382723 ZNF454Q8N9F8 522 aa23.69■■□□□ 1.38
MSX1-201ENST00000382723 ASB17Q8WXJ9 295 aa23.69■■□□□ 1.38
MSX1-201ENST00000382723 SLCO1C1Q9NYB5 712 aa23.69■■□□□ 1.38
MSX1-201ENST00000382723 TUBD1Q9UJT1 453 aa23.69■■□□□ 1.38
MSX1-201ENST00000382723 METTL15A6NJ78 407 aa23.68■■□□□ 1.38
MSX1-201ENST00000382723 TMCC2O75069 709 aa23.68■■□□□ 1.38
MSX1-201ENST00000382723 RPS25P62851 125 aaKnown RBP23.68■■□□□ 1.38
MSX1-201ENST00000382723 EGR3Q06889 387 aa23.68■■□□□ 1.38
MSX1-201ENST00000382723 PCK2Q16822 640 aa23.68■■□□□ 1.38
MSX1-201ENST00000382723 SOWAHCQ53LP3 525 aaPredicted RBP23.68■■□□□ 1.38
MSX1-201ENST00000382723 TSPO2Q5TGU0 170 aa23.68■■□□□ 1.38
MSX1-201ENST00000382723 LRRN1Q6UXK5 716 aa23.68■■□□□ 1.38
MSX1-201ENST00000382723 NUFIP2Q7Z417 695 aaKnown RBP23.68■■□□□ 1.38
MSX1-201ENST00000382723 SLCO5A1Q9H2Y9 848 aa23.68■■□□□ 1.38
MSX1-201ENST00000382723 RPP14O95059 124 aaKnown RBP23.67■■□□□ 1.38
MSX1-201ENST00000382723 WNT11O96014 354 aa23.67■■□□□ 1.38
MSX1-201ENST00000382723 HOXD11P31277 338 aaPredicted RBP23.67■■□□□ 1.38
MSX1-201ENST00000382723 NCS1P62166 190 aa23.67■■□□□ 1.38
MSX1-201ENST00000382723 AQP6Q13520 282 aa23.67■■□□□ 1.38
MSX1-201ENST00000382723 TMED9Q9BVK6 235 aa23.67■■□□□ 1.38
MSX1-201ENST00000382723 CYB5R1Q9UHQ9 305 aa23.67■■□□□ 1.38
MSX1-201ENST00000382723 TACSTD2P09758 323 aa23.67■■□□□ 1.38
MSX1-201ENST00000382723 PSMA1P25786 263 aaKnown RBP23.67■■□□□ 1.38
MSX1-201ENST00000382723 TGFBR1P36897 503 aa23.67■■□□□ 1.38
MSX1-201ENST00000382723 CAPZA2P47755 286 aa23.67■■□□□ 1.38
MSX1-201ENST00000382723 TAS2R43P59537 309 aa23.67■■□□□ 1.38
MSX1-201ENST00000382723 ARL9Q6T311 187 aa23.67■■□□□ 1.38
MSX1-201ENST00000382723 KCTD20Q7Z5Y7 419 aa23.67■■□□□ 1.38
MSX1-201ENST00000382723 TM9SF2Q99805 663 aa23.67■■□□□ 1.38
MSX1-201ENST00000382723 EXOSC4Q9NPD3 245 aaKnown RBP23.67■■□□□ 1.38
MSX1-201ENST00000382723 KRTCAP3Q53RY4 240 aa23.66■■□□□ 1.38
MSX1-201ENST00000382723 TEX19Q8NA77 164 aa23.66■■□□□ 1.38
MSX1-201ENST00000382723 OR52N5Q8NH56 324 aa23.66■■□□□ 1.38
MSX1-201ENST00000382723 APH1AQ96BI3 265 aa23.66■■□□□ 1.38
MSX1-201ENST00000382723 OR8B4Q96RC9 309 aa23.66■■□□□ 1.38
MSX1-201ENST00000382723 NELFAQ9H3P2 528 aa23.66■■□□□ 1.38
MSX1-201ENST00000382723 C12orf49Q9H741 205 aa23.66■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms