RNA–Protein interactions for RNA: ENST00000367255.9

SYNE1-207, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene SYNE1, Length 27,748 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-207ENST00000367255 TPRP12270 2363 aaKnown RBP3.45□□□□□ -1.86
SYNE1-207ENST00000367255 ANKRD34CP0C6C1 535 aa3.45□□□□□ -1.86
SYNE1-207ENST00000367255 SMUG1Q53HV7 270 aa3.45□□□□□ -1.86
SYNE1-207ENST00000367255 SFXN4Q6P4A7 337 aa3.45□□□□□ -1.86
SYNE1-207ENST00000367255 CMC1Q7Z7K0 106 aa3.45□□□□□ -1.86
SYNE1-207ENST00000367255 SLC25A28Q96A46 364 aa3.45□□□□□ -1.86
SYNE1-207ENST00000367255 ZNF700Q9H0M5 742 aa3.45□□□□□ -1.86
SYNE1-207ENST00000367255 OR51I2Q9H344 312 aa3.45□□□□□ -1.86
SYNE1-207ENST00000367255 UQCR10Q9UDW1 63 aa3.45□□□□□ -1.86
SYNE1-207ENST00000367255 AUP1Q9Y679 476 aa3.45□□□□□ -1.86
SYNE1-207ENST00000367255 V9GY05 133 aa3.45□□□□□ -1.86
SYNE1-207ENST00000367255 CD1DP15813 335 aa3.45□□□□□ -1.86
SYNE1-207ENST00000367255 UBE2G2P60604 165 aa3.45□□□□□ -1.86
SYNE1-207ENST00000367255 OTPQ5XKR4 325 aa3.45□□□□□ -1.86
SYNE1-207ENST00000367255 WDR1O75083 606 aa3.45□□□□□ -1.86
SYNE1-207ENST00000367255 SEMA4FO95754 770 aa3.45□□□□□ -1.86
SYNE1-207ENST00000367255 GABRA4P48169 554 aa3.45□□□□□ -1.86
SYNE1-207ENST00000367255 WBP2NLQ6ICG8 309 aa3.45□□□□□ -1.86
SYNE1-207ENST00000367255 SELENOHQ8IZQ5 122 aaKnown RBP3.45□□□□□ -1.86
SYNE1-207ENST00000367255 LINC00469Q8N7U9 141 aa3.45□□□□□ -1.86
SYNE1-207ENST00000367255 UCN3Q969E3 161 aa3.45□□□□□ -1.86
SYNE1-207ENST00000367255 TMEM185BQ9H7F4 350 aa3.45□□□□□ -1.86
SYNE1-207ENST00000367255 RIMBP3CA6NJZ7 1639 aa3.45□□□□□ -1.86
SYNE1-207ENST00000367255 RIMBP3BA6NNM3 1639 aa3.45□□□□□ -1.86
SYNE1-207ENST00000367255 TRBC2A0A5B9 178 aa3.45□□□□□ -1.86
SYNE1-207ENST00000367255 FAM231BA6NCW3 169 aa3.45□□□□□ -1.86
SYNE1-207ENST00000367255 PAPLNO95428 1278 aa3.45□□□□□ -1.86
SYNE1-207ENST00000367255 KRASP01116 189 aa3.45□□□□□ -1.86
SYNE1-207ENST00000367255 RAC2P15153 192 aa3.45□□□□□ -1.86
SYNE1-207ENST00000367255 ZNF8P17098 575 aaPredicted RBP3.45□□□□□ -1.86
SYNE1-207ENST00000367255 FSTP19883 344 aa3.45□□□□□ -1.86
SYNE1-207ENST00000367255 EBPQ15125 230 aaKnown RBP3.45□□□□□ -1.86
SYNE1-207ENST00000367255 SFRP4Q6FHJ7 346 aaPredicted RBP3.45□□□□□ -1.86
SYNE1-207ENST00000367255 OR9Q2Q8NGE9 314 aa3.45□□□□□ -1.86
SYNE1-207ENST00000367255 OR5B17Q8NGF7 314 aa3.45□□□□□ -1.86
SYNE1-207ENST00000367255 EDARADDQ8WWZ3 215 aa3.45□□□□□ -1.86
SYNE1-207ENST00000367255 ZPBPQ9BS86 351 aa3.45□□□□□ -1.86
SYNE1-207ENST00000367255 OSER1Q9NX31 292 aa3.45□□□□□ -1.86
SYNE1-207ENST00000367255 ZNF337Q9Y3M9 751 aa3.45□□□□□ -1.86
SYNE1-207ENST00000367255 YY2O15391 372 aa3.45□□□□□ -1.86
SYNE1-207ENST00000367255 CDX1P47902 265 aaPredicted RBP3.45□□□□□ -1.86
SYNE1-207ENST00000367255 B3GNT8Q7Z7M8 397 aa3.45□□□□□ -1.86
SYNE1-207ENST00000367255 FAM71F1Q96KD3 344 aaPredicted RBP3.45□□□□□ -1.86
SYNE1-207ENST00000367255 TBX5Q99593 518 aa3.45□□□□□ -1.86
SYNE1-207ENST00000367255 NEURL2Q9BR09 285 aa3.45□□□□□ -1.86
SYNE1-207ENST00000367255 B3GALT5Q9Y2C3 310 aa3.45□□□□□ -1.86
SYNE1-207ENST00000367255 CTSEP14091 401 aa3.45□□□□□ -1.86
SYNE1-207ENST00000367255 GPX3P22352 226 aa3.45□□□□□ -1.86
SYNE1-207ENST00000367255 EDNRAP25101 427 aa3.45□□□□□ -1.86
SYNE1-207ENST00000367255 TMEM217Q8N7C4 229 aa3.45□□□□□ -1.86
SYNE1-207ENST00000367255 OR4P4Q8NGL7 312 aa3.45□□□□□ -1.86
SYNE1-207ENST00000367255 ZFP3Q96NJ6 502 aa3.45□□□□□ -1.86
SYNE1-207ENST00000367255 ALG12Q9BV10 488 aa3.45□□□□□ -1.86
SYNE1-207ENST00000367255 PLSCR4Q9NRQ2 329 aa3.45□□□□□ -1.86
SYNE1-207ENST00000367255 FBLN5Q9UBX5 448 aa3.45□□□□□ -1.86
SYNE1-207ENST00000367255 RIMBP3Q9UFD9 1639 aa3.45□□□□□ -1.86
SYNE1-207ENST00000367255 BRICD5Q6PL45 260 aa3.45□□□□□ -1.86
SYNE1-207ENST00000367255 PQLC3Q8N755 202 aa3.45□□□□□ -1.86
SYNE1-207ENST00000367255 LAMTOR2Q9Y2Q5 125 aa3.45□□□□□ -1.86
SYNE1-207ENST00000367255 IGHG1P01857 330 aa3.45□□□□□ -1.86
SYNE1-207ENST00000367255 C1SP09871 688 aa3.45□□□□□ -1.86
SYNE1-207ENST00000367255 ARAFP10398 606 aa3.45□□□□□ -1.86
SYNE1-207ENST00000367255 FABP2P12104 132 aa3.45□□□□□ -1.86
SYNE1-207ENST00000367255 DUSP1P28562 367 aa3.45□□□□□ -1.86
SYNE1-207ENST00000367255 PDZK1IP1Q13113 114 aa3.45□□□□□ -1.86
SYNE1-207ENST00000367255 ADPRMQ3LIE5 342 aa3.45□□□□□ -1.86
SYNE1-207ENST00000367255 FIBINQ8TAL6 211 aa3.45□□□□□ -1.86
SYNE1-207ENST00000367255 EGLN2Q96KS0 407 aa3.45□□□□□ -1.86
SYNE1-207ENST00000367255 WDR61Q9GZS3 305 aaKnown RBP3.45□□□□□ -1.86
SYNE1-207ENST00000367255 CSNK1G1Q9HCP0 422 aa3.45□□□□□ -1.86
SYNE1-207ENST00000367255 FGF20Q9NP95 211 aaPredicted RBP3.45□□□□□ -1.86
SYNE1-207ENST00000367255 IL19Q9UHD0 177 aa3.45□□□□□ -1.86
SYNE1-207ENST00000367255 TMEM233B4DJY2 109 aa3.45□□□□□ -1.86
SYNE1-207ENST00000367255 MT-CYBP00156 380 aaPredicted RBP3.45□□□□□ -1.86
SYNE1-207ENST00000367255 PMS2P3Q13401 168 aa3.45□□□□□ -1.86
SYNE1-207ENST00000367255 HES1Q14469 280 aa3.45□□□□□ -1.86
SYNE1-207ENST00000367255 TIGD5Q53EQ6 642 aa3.45□□□□□ -1.86
SYNE1-207ENST00000367255 TXNRD3NBQ6F5E7 133 aa3.45□□□□□ -1.86
SYNE1-207ENST00000367255 PRR22Q8IZ63 422 aa3.45□□□□□ -1.86
SYNE1-207ENST00000367255 FRMD1Q8N878 549 aa3.45□□□□□ -1.86
SYNE1-207ENST00000367255 PERPQ96FX8 193 aa3.45□□□□□ -1.86
SYNE1-207ENST00000367255 NUDT11Q96G61 164 aa3.45□□□□□ -1.86
SYNE1-207ENST00000367255 DIRC2Q96SL1 478 aa3.45□□□□□ -1.86
SYNE1-207ENST00000367255 ARHGAP9Q9BRR9 750 aa3.45□□□□□ -1.86
SYNE1-207ENST00000367255 P4HTMQ9NXG6 502 aa3.45□□□□□ -1.86
SYNE1-207ENST00000367255 TRAPPC2LH3BP13 241 aa3.45□□□□□ -1.86
SYNE1-207ENST00000367255 SDHDO14521 159 aa3.45□□□□□ -1.86
SYNE1-207ENST00000367255 B3GAT3O94766 335 aa3.45□□□□□ -1.86
SYNE1-207ENST00000367255 PNPP00491 289 aa3.45□□□□□ -1.86
SYNE1-207ENST00000367255 PNLIPRP2P54317 469 aa3.45□□□□□ -1.86
SYNE1-207ENST00000367255 DUSP5Q16690 384 aa3.45□□□□□ -1.86
SYNE1-207ENST00000367255 ZFP41Q8N8Y5 198 aa3.45□□□□□ -1.86
SYNE1-207ENST00000367255 OR14A16Q8NHC5 309 aa3.45□□□□□ -1.86
SYNE1-207ENST00000367255 TMEM106AQ96A25 262 aa3.45□□□□□ -1.86
SYNE1-207ENST00000367255 AQP10Q96PS8 301 aa3.45□□□□□ -1.86
SYNE1-207ENST00000367255 RNASEK-C17orf49H0YIS7 233 aa3.45□□□□□ -1.86
SYNE1-207ENST00000367255 GYPAP02724 150 aa3.45□□□□□ -1.86
SYNE1-207ENST00000367255 CD3GP09693 182 aa3.45□□□□□ -1.86
SYNE1-207ENST00000367255 CELP19835 753 aa3.45□□□□□ -1.86
SYNE1-207ENST00000367255 UBE2KP61086 200 aa3.45□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms