RNA–Protein interactions for RNA: ENST00000354901.8

SMG6-202, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 1 (best) BASIC

Gene SMG6, Length 3,473 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-202ENST00000354901 SIGLEC7Q9Y286 467 aa8.52□□□□□ -1.05
SMG6-202ENST00000354901 ADAM18Q9Y3Q7 739 aa8.52□□□□□ -1.05
SMG6-202ENST00000354901 HEBP2Q9Y5Z4 205 aa8.52□□□□□ -1.05
SMG6-202ENST00000354901 SPTBN5Q9NRC6 3674 aaKnown RBP8.52□□□□□ -1.05
SMG6-202ENST00000354901 MUC22E2RYF6 1773 aaPredicted RBP8.52□□□□□ -1.05
SMG6-202ENST00000354901 A0A1B0GWA3 101 aa8.52□□□□□ -1.05
SMG6-202ENST00000354901 SULT2B1O00204 365 aa8.52□□□□□ -1.05
SMG6-202ENST00000354901 PLRG1O43660 514 aaKnown RBP8.52□□□□□ -1.05
SMG6-202ENST00000354901 AQP8O94778 261 aa8.52□□□□□ -1.05
SMG6-202ENST00000354901 ATP1B1P05026 303 aa8.52□□□□□ -1.05
SMG6-202ENST00000354901 DBIP07108 87 aaKnown RBP8.52□□□□□ -1.05
SMG6-202ENST00000354901 COX5BP10606 129 aa8.52□□□□□ -1.05
SMG6-202ENST00000354901 MGMTP16455 207 aa8.52□□□□□ -1.05
SMG6-202ENST00000354901 RPL4P36578 427 aaKnown RBP8.52□□□□□ -1.05
SMG6-202ENST00000354901 PBX2P40425 430 aa8.52□□□□□ -1.05
SMG6-202ENST00000354901 EMDP50402 254 aa8.52□□□□□ -1.05
SMG6-202ENST00000354901 ILF3Q12906 894 aaKnown RBP eCLIP8.52□□□□□ -1.051e-7■■■□□ 18.9
SMG6-202ENST00000354901 AIMP2Q13155 320 aaKnown RBP8.52□□□□□ -1.05
SMG6-202ENST00000354901 C1orf61Q13536 156 aa8.52□□□□□ -1.05
SMG6-202ENST00000354901 SHHQ15465 462 aa8.52□□□□□ -1.05
SMG6-202ENST00000354901 SURF2Q15527 256 aaPredicted RBP8.52□□□□□ -1.05
SMG6-202ENST00000354901 ACTBL2Q562R1 376 aa8.52□□□□□ -1.05
SMG6-202ENST00000354901 PYY3Q5JQD4 70 aa8.52□□□□□ -1.05
SMG6-202ENST00000354901 FAM69AQ5T7M9 428 aa8.52□□□□□ -1.05
SMG6-202ENST00000354901 PRAMEF17Q5VTA0 474 aa8.52□□□□□ -1.05
SMG6-202ENST00000354901 FCRL6Q6DN72 434 aa8.52□□□□□ -1.05
SMG6-202ENST00000354901 ARRDC1Q8N5I2 433 aa8.52□□□□□ -1.05
SMG6-202ENST00000354901 GATSQ8NAP1 163 aa8.52□□□□□ -1.05
SMG6-202ENST00000354901 OR52R1Q8NGF1 315 aa8.52□□□□□ -1.05
SMG6-202ENST00000354901 OR6K6Q8NGW6 343 aa8.52□□□□□ -1.05
SMG6-202ENST00000354901 HIST1H2BAQ96A08 127 aa8.52□□□□□ -1.05
SMG6-202ENST00000354901 ELF4Q99607 663 aaPredicted RBP8.52□□□□□ -1.05
SMG6-202ENST00000354901 PDCD1LG2Q9BQ51 273 aa8.52□□□□□ -1.05
SMG6-202ENST00000354901 TCEAL2Q9H3H9 227 aaPredicted RBP8.52□□□□□ -1.05
SMG6-202ENST00000354901 HRASLS2Q9NWW9 162 aa8.52□□□□□ -1.05
SMG6-202ENST00000354901 TREM2Q9NZC2 230 aa8.52□□□□□ -1.05
SMG6-202ENST00000354901 LAMP5Q9UJQ1 280 aa8.52□□□□□ -1.05
SMG6-202ENST00000354901 ZNF223Q9UK11 482 aaPredicted RBP8.52□□□□□ -1.05
SMG6-202ENST00000354901 C19orf53Q9UNZ5 99 aaPredicted RBP8.52□□□□□ -1.05
SMG6-202ENST00000354901 YBX2Q9Y2T7 364 aaKnown RBP8.52□□□□□ -1.05
SMG6-202ENST00000354901 C13orf42A0A1B0GVH6 325 aa8.52□□□□□ -1.05
SMG6-202ENST00000354901 A0A1B0GVT2 93 aa8.52□□□□□ -1.05
SMG6-202ENST00000354901 TMEM72A0PK05 275 aa8.52□□□□□ -1.05
SMG6-202ENST00000354901 COLCA2A8K830 154 aa8.52□□□□□ -1.05
SMG6-202ENST00000354901 HRKO00198 91 aa8.52□□□□□ -1.05
SMG6-202ENST00000354901 UBE2CO00762 179 aa8.52□□□□□ -1.05
SMG6-202ENST00000354901 GTF2F2P13984 249 aa8.52□□□□□ -1.05
SMG6-202ENST00000354901 ABOP16442 354 aa8.52□□□□□ -1.05
SMG6-202ENST00000354901 SPI1P17947 270 aa8.52□□□□□ -1.05
SMG6-202ENST00000354901 NTSR1P30989 418 aa8.52□□□□□ -1.05
SMG6-202ENST00000354901 TSPAN7P41732 249 aa8.52□□□□□ -1.05
SMG6-202ENST00000354901 KIR2DL1P43626 348 aaPredicted RBP8.52□□□□□ -1.05
SMG6-202ENST00000354901 RPS10P46783 165 aaKnown RBP8.52□□□□□ -1.05
SMG6-202ENST00000354901 GNG10P50151 68 aa8.52□□□□□ -1.05
SMG6-202ENST00000354901 CEBPEQ15744 281 aa8.52□□□□□ -1.05
SMG6-202ENST00000354901 SCGB2B2Q4G0G5 96 aa8.52□□□□□ -1.05
SMG6-202ENST00000354901 ALG10BQ5I7T1 473 aa8.52□□□□□ -1.05
SMG6-202ENST00000354901 C9orf50Q5SZB4 431 aa8.52□□□□□ -1.05
SMG6-202ENST00000354901 KCTD9Q7L273 389 aa8.52□□□□□ -1.05
SMG6-202ENST00000354901 PARGQ86W56 976 aa8.52□□□□□ -1.05
SMG6-202ENST00000354901 ARMC10Q8N2F6 343 aa8.52□□□□□ -1.05
SMG6-202ENST00000354901 SPICQ8N5J4 248 aa8.52□□□□□ -1.05
SMG6-202ENST00000354901 METTL27Q8N6F8 245 aaPredicted RBP8.52□□□□□ -1.05
SMG6-202ENST00000354901 FAM71CQ8NEG0 241 aa8.52□□□□□ -1.05
SMG6-202ENST00000354901 OR51S1Q8NGJ8 323 aa8.52□□□□□ -1.05
SMG6-202ENST00000354901 RAB3CQ96E17 227 aa8.52□□□□□ -1.05
SMG6-202ENST00000354901 THOC3Q96J01 351 aaKnown RBP8.52□□□□□ -1.05
SMG6-202ENST00000354901 AKR1E2Q96JD6 320 aa8.52□□□□□ -1.05
SMG6-202ENST00000354901 ZFYVE21Q9BQ24 234 aa8.52□□□□□ -1.05
SMG6-202ENST00000354901 TSPAN10Q9H1Z9 355 aaPredicted RBP8.52□□□□□ -1.05
SMG6-202ENST00000354901 FN3KRPQ9HA64 309 aa8.52□□□□□ -1.05
SMG6-202ENST00000354901 ACKR4Q9NPB9 350 aa8.52□□□□□ -1.05
SMG6-202ENST00000354901 CMC2Q9NRP2 79 aa8.52□□□□□ -1.05
SMG6-202ENST00000354901 FLRT3Q9NZU0 649 aa8.52□□□□□ -1.05
SMG6-202ENST00000354901 CAMK2AQ9UQM7 478 aa8.52□□□□□ -1.05
SMG6-202ENST00000354901 SLC22A31A6NKX4 558 aa8.51□□□□□ -1.05
SMG6-202ENST00000354901 AGR2O95994 175 aa8.51□□□□□ -1.05
SMG6-202ENST00000354901 NGFRP08138 427 aa8.51□□□□□ -1.05
SMG6-202ENST00000354901 SOX2P48431 317 aa8.51□□□□□ -1.05
SMG6-202ENST00000354901 GUCA2AQ02747 115 aa8.51□□□□□ -1.05
SMG6-202ENST00000354901 PLAURQ03405 335 aa8.51□□□□□ -1.05
SMG6-202ENST00000354901 GAMTQ14353 236 aa8.51□□□□□ -1.05
SMG6-202ENST00000354901 TIPARPQ7Z3E1 657 aaKnown RBP8.51□□□□□ -1.05
SMG6-202ENST00000354901 TPRA1Q86W33 373 aa8.51□□□□□ -1.05
SMG6-202ENST00000354901 STEAP2Q8NFT2 490 aa8.51□□□□□ -1.05
SMG6-202ENST00000354901 OR1J4Q8NGS1 313 aa8.51□□□□□ -1.05
SMG6-202ENST00000354901 OR9A4Q8NGU2 314 aa8.51□□□□□ -1.05
SMG6-202ENST00000354901 WDR92Q96MX6 357 aa8.51□□□□□ -1.05
SMG6-202ENST00000354901 EDEM2Q9BV94 578 aa8.51□□□□□ -1.05
SMG6-202ENST00000354901 UQCC1Q9NVA1 299 aa8.51□□□□□ -1.05
SMG6-202ENST00000354901 VSX1Q9NZR4 365 aaPredicted RBP8.51□□□□□ -1.05
SMG6-202ENST00000354901 GNG8Q9UK08 70 aa8.51□□□□□ -1.05
SMG6-202ENST00000354901 ZNF346Q9UL40 294 aaKnown RBP8.51□□□□□ -1.05
SMG6-202ENST00000354901 ZNF337Q9Y3M9 751 aa8.51□□□□□ -1.05
SMG6-202ENST00000354901 LAMA1P25391 3075 aa8.51□□□□□ -1.05
SMG6-202ENST00000354901 HMSDA8MTL9 139 aa8.51□□□□□ -1.05
SMG6-202ENST00000354901 IDSB3KWA1 339 aa8.51□□□□□ -1.05
SMG6-202ENST00000354901 CELA2BP08218 269 aaPredicted RBP8.51□□□□□ -1.05
SMG6-202ENST00000354901 SFTA3P0C7M3 94 aa8.51□□□□□ -1.05
SMG6-202ENST00000354901 ITGA3P26006 1051 aa8.51□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms