RNA–Protein interactions for RNA: ENST00000349511.8

UBA3-201, Transcript of ubiquitin like modifier activating enzyme 3, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene UBA3, Length 2,112 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBA3-201ENST00000349511 CCDC86Q9H6F5 360 aaKnown RBP12.02□□□□□ -0.48
UBA3-201ENST00000349511 PTGES2Q9H7Z7 377 aa12.02□□□□□ -0.48
UBA3-201ENST00000349511 LRFN1Q9P244 771 aa12.02□□□□□ -0.48
UBA3-201ENST00000349511 HIF3AQ9Y2N7 669 aa12.02□□□□□ -0.48
UBA3-201ENST00000349511 AK6Q9Y3D8 172 aaKnown RBP12.02□□□□□ -0.48
UBA3-201ENST00000349511 P04436 131 aa12.02□□□□□ -0.49
UBA3-201ENST00000349511 LIPCP11150 499 aa12.02□□□□□ -0.49
UBA3-201ENST00000349511 CXCL3P19876 107 aa12.02□□□□□ -0.49
UBA3-201ENST00000349511 CD82P27701 267 aa12.02□□□□□ -0.49
UBA3-201ENST00000349511 GRPRP30550 384 aa12.02□□□□□ -0.49
UBA3-201ENST00000349511 SFTPDP35247 375 aa12.02□□□□□ -0.49
UBA3-201ENST00000349511 CD96P40200 585 aa12.02□□□□□ -0.49
UBA3-201ENST00000349511 APOBEC1P41238 236 aaKnown RBP12.02□□□□□ -0.49
UBA3-201ENST00000349511 GBX2P52951 348 aaPredicted RBP12.02□□□□□ -0.49
UBA3-201ENST00000349511 PRPS1P60891 318 aa12.02□□□□□ -0.49
UBA3-201ENST00000349511 OR7A5Q15622 319 aa12.02□□□□□ -0.49
UBA3-201ENST00000349511 ABHD17BQ5VST6 288 aa12.02□□□□□ -0.49
UBA3-201ENST00000349511 ZNF782Q6ZMW2 699 aaPredicted RBP12.02□□□□□ -0.49
UBA3-201ENST00000349511 PRSS45Q7RTY3 260 aa12.02□□□□□ -0.49
UBA3-201ENST00000349511 FAM109AQ8N4B1 249 aa12.02□□□□□ -0.49
UBA3-201ENST00000349511 FADS6Q8N9I5 356 aa12.02□□□□□ -0.49
UBA3-201ENST00000349511 SMIM19Q96E16 107 aa12.02□□□□□ -0.49
UBA3-201ENST00000349511 SIGLEC12Q96PQ1 595 aa12.02□□□□□ -0.49
UBA3-201ENST00000349511 CACNG6Q9BXT2 260 aa12.02□□□□□ -0.49
UBA3-201ENST00000349511 B3GNT4Q9C0J1 378 aa12.02□□□□□ -0.49
UBA3-201ENST00000349511 RANBP3Q9H6Z4 567 aaPredicted RBP12.02□□□□□ -0.49
UBA3-201ENST00000349511 NRIP3Q9NQ35 241 aa12.02□□□□□ -0.49
UBA3-201ENST00000349511 DEPPQ9NTK1 212 aa12.02□□□□□ -0.49
UBA3-201ENST00000349511 TAS2R5Q9NYW4 299 aa12.02□□□□□ -0.49
UBA3-201ENST00000349511 TMA7Q9Y2S6 64 aaKnown RBP12.02□□□□□ -0.49
UBA3-201ENST00000349511 NCKAP5O14513 1909 aa12.02□□□□□ -0.49
UBA3-201ENST00000349511 IGLV3-32A0A0A0MS00 114 aa12.01□□□□□ -0.49
UBA3-201ENST00000349511 A0A1W2PNR3 127 aa12.01□□□□□ -0.49
UBA3-201ENST00000349511 H7C1C5 153 aa12.01□□□□□ -0.49
UBA3-201ENST00000349511 GFRA3O60609 400 aa12.01□□□□□ -0.49
UBA3-201ENST00000349511 NOS1APO75052 506 aaPredicted RBP12.01□□□□□ -0.49
UBA3-201ENST00000349511 ARL6IP5O75915 188 aa12.01□□□□□ -0.49
UBA3-201ENST00000349511 AHSA1O95433 338 aa12.01□□□□□ -0.49
UBA3-201ENST00000349511 OR2T7P0C7T2 308 aa12.01□□□□□ -0.49
UBA3-201ENST00000349511 ANXA3P12429 323 aa12.01□□□□□ -0.49
UBA3-201ENST00000349511 SDHBP21912 280 aa12.01□□□□□ -0.49
UBA3-201ENST00000349511 DPP4P27487 766 aa12.01□□□□□ -0.49
UBA3-201ENST00000349511 RFC3P40938 356 aa12.01□□□□□ -0.49
UBA3-201ENST00000349511 NAA10P41227 235 aaPredicted RBP12.01□□□□□ -0.49
UBA3-201ENST00000349511 RPS11P62280 158 aaKnown RBP eCLIP12.01□□□□□ -0.49
UBA3-201ENST00000349511 LCN6P62502 163 aa12.01□□□□□ -0.49
UBA3-201ENST00000349511 AIMP2Q13155 320 aaKnown RBP12.01□□□□□ -0.49
UBA3-201ENST00000349511 DPY19L2P2Q6ZN68 376 aa12.01□□□□□ -0.49
UBA3-201ENST00000349511 SLC35F2Q8IXU6 374 aa12.01□□□□□ -0.49
UBA3-201ENST00000349511 OR11H4Q8NGC9 324 aa12.01□□□□□ -0.49
UBA3-201ENST00000349511 OR2T27Q8NH04 317 aa12.01□□□□□ -0.49
UBA3-201ENST00000349511 ANGPTL6Q8NI99 470 aa12.01□□□□□ -0.49
UBA3-201ENST00000349511 ZNF417Q8TAU3 575 aa12.01□□□□□ -0.49
UBA3-201ENST00000349511 MS4A3Q96HJ5 214 aa12.01□□□□□ -0.49
UBA3-201ENST00000349511 SGCZQ96LD1 299 aa12.01□□□□□ -0.49
UBA3-201ENST00000349511 ZNF587Q96SQ5 575 aaPredicted RBP12.01□□□□□ -0.49
UBA3-201ENST00000349511 CNN2Q99439 309 aaKnown RBP12.01□□□□□ -0.49
UBA3-201ENST00000349511 FKRPQ9H9S5 495 aa12.01□□□□□ -0.49
UBA3-201ENST00000349511 CAMK2AQ9UQM7 478 aa12.01□□□□□ -0.49
UBA3-201ENST00000349511 TRABD2BA6NFA1 517 aa12.01□□□□□ -0.49
UBA3-201ENST00000349511 FAM171A2A8MVW0 826 aa12.01□□□□□ -0.49
UBA3-201ENST00000349511 DLL1O00548 723 aa12.01□□□□□ -0.49
UBA3-201ENST00000349511 WDPCPO95876 746 aa12.01□□□□□ -0.49
UBA3-201ENST00000349511 MT-ND4P03905 459 aa12.01□□□□□ -0.49
UBA3-201ENST00000349511 UCHL1P09936 223 aa12.01□□□□□ -0.49
UBA3-201ENST00000349511 H2AFB2P0C5Z0 115 aa12.01□□□□□ -0.49
UBA3-201ENST00000349511 UQCRC1P31930 480 aa12.01□□□□□ -0.49
UBA3-201ENST00000349511 PER3P56645 1201 aa12.01□□□□□ -0.49
UBA3-201ENST00000349511 ACTA2P62736 377 aa12.01□□□□□ -0.49
UBA3-201ENST00000349511 ACTG2P63267 376 aa12.01□□□□□ -0.49
UBA3-201ENST00000349511 SIRPAP78324 504 aa12.01□□□□□ -0.49
UBA3-201ENST00000349511 ST3GAL2Q16842 350 aa12.01□□□□□ -0.49
UBA3-201ENST00000349511 RSPO4Q2I0M5 234 aaPredicted RBP12.01□□□□□ -0.49
UBA3-201ENST00000349511 GSG1Q2KHT4 349 aa12.01□□□□□ -0.49
UBA3-201ENST00000349511 CDONQ4KMG0 1287 aa12.01□□□□□ -0.49
UBA3-201ENST00000349511 MTFR2Q6P444 385 aa12.01□□□□□ -0.49
UBA3-201ENST00000349511 MAMDC2Q7Z304 686 aaPredicted RBP12.01□□□□□ -0.49
UBA3-201ENST00000349511 IZUMO1Q8IYV9 350 aa12.01□□□□□ -0.49
UBA3-201ENST00000349511 SYS1Q8N2H4 156 aa12.01□□□□□ -0.49
UBA3-201ENST00000349511 LRRC75AQ8NAA5 344 aa12.01□□□□□ -0.49
UBA3-201ENST00000349511 ZNRF4Q8WWF5 429 aa12.01□□□□□ -0.49
UBA3-201ENST00000349511 LIPHQ8WWY8 451 aa12.01□□□□□ -0.49
UBA3-201ENST00000349511 MRGPRX4Q96LA9 322 aa12.01□□□□□ -0.49
UBA3-201ENST00000349511 FER1L6-AS2Q96M78 137 aa12.01□□□□□ -0.49
UBA3-201ENST00000349511 TSSK2Q96PF2 358 aa12.01□□□□□ -0.49
UBA3-201ENST00000349511 OR14A2Q96R54 314 aa12.01□□□□□ -0.49
UBA3-201ENST00000349511 B3GNT2Q9NY97 397 aa12.01□□□□□ -0.49
UBA3-201ENST00000349511 COPZ2Q9P299 210 aa12.01□□□□□ -0.49
UBA3-201ENST00000349511 SPATA2Q9UM82 520 aa12.01□□□□□ -0.49
UBA3-201ENST00000349511 TRBV2A0A0J9YWF9 115 aa12□□□□□ -0.49
UBA3-201ENST00000349511 PINLYPA6NC86 204 aa12□□□□□ -0.49
UBA3-201ENST00000349511 RFPL3SP0C7P2 107 aa12□□□□□ -0.49
UBA3-201ENST00000349511 EDNRAP25101 427 aa12□□□□□ -0.49
UBA3-201ENST00000349511 KLF9Q13886 244 aaPredicted RBP12□□□□□ -0.49
UBA3-201ENST00000349511 GGTLC2Q14390 218 aa12□□□□□ -0.49
UBA3-201ENST00000349511 FAM209AQ5JX71 171 aa12□□□□□ -0.49
UBA3-201ENST00000349511 ZBTB37Q5TC79 503 aa12□□□□□ -0.49
UBA3-201ENST00000349511 RAET1LQ5VY80 246 aa12□□□□□ -0.49
UBA3-201ENST00000349511 BTN2A1Q7KYR7 527 aa12□□□□□ -0.49
UBA3-201ENST00000349511 LUZP2Q86TE4 346 aa12□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms