RNA–Protein interactions for RNA: ENST00000343483.6

HOXA9-201, Transcript of homeobox A9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXA9, Length 2,060 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA9-201ENST00000343483 MAGEB1P43366 347 aa16.65■□□□□ 0.26
HOXA9-201ENST00000343483 Q0VFX4 171 aa16.65■□□□□ 0.26
HOXA9-201ENST00000343483 MRPL28Q13084 256 aaKnown RBP16.65■□□□□ 0.26
HOXA9-201ENST00000343483 SSPNQ14714 243 aa16.65■□□□□ 0.26
HOXA9-201ENST00000343483 TMEM176BQ3YBM2 270 aaPredicted RBP16.65■□□□□ 0.26
HOXA9-201ENST00000343483 CDCP2Q5VXM1 449 aa16.65■□□□□ 0.26
HOXA9-201ENST00000343483 SLC18B1Q6NT16 456 aa16.65■□□□□ 0.26
HOXA9-201ENST00000343483 LRRN1Q6UXK5 716 aa16.65■□□□□ 0.26
HOXA9-201ENST00000343483 GPAT4Q86UL3 456 aa16.65■□□□□ 0.26
HOXA9-201ENST00000343483 DND1Q8IYX4 353 aaKnown RBP16.65■□□□□ 0.26
HOXA9-201ENST00000343483 HAVCR2Q8TDQ0 301 aa16.65■□□□□ 0.26
HOXA9-201ENST00000343483 MAP6Q96JE9 813 aa16.65■□□□□ 0.26
HOXA9-201ENST00000343483 MARVELD1Q9BSK0 173 aa16.65■□□□□ 0.26
HOXA9-201ENST00000343483 A0A1W2PNV4 684 aa16.64■□□□□ 0.25
HOXA9-201ENST00000343483 NPIPB13A6NJU9 1138 aa16.64■□□□□ 0.25
HOXA9-201ENST00000343483 NPIPB4C9JG80 1138 aa16.64■□□□□ 0.25
HOXA9-201ENST00000343483 SLC43A1O75387 559 aa16.64■□□□□ 0.25
HOXA9-201ENST00000343483 MT-CO3P00414 261 aa16.64■□□□□ 0.25
HOXA9-201ENST00000343483 ADH6P28332 368 aa16.64■□□□□ 0.25
HOXA9-201ENST00000343483 BIDP55957 195 aa16.64■□□□□ 0.25
HOXA9-201ENST00000343483 IFITM2Q01629 132 aa16.64■□□□□ 0.25
HOXA9-201ENST00000343483 SF3B4Q15427 424 aaKnown RBP eCLIP16.64■□□□□ 0.25
HOXA9-201ENST00000343483 FAM205BPQ63HN1 556 aa16.64■□□□□ 0.25
HOXA9-201ENST00000343483 DNM1P34Q6PK57 102 aa16.64■□□□□ 0.25
HOXA9-201ENST00000343483 DHRS13Q6UX07 377 aa16.64■□□□□ 0.25
HOXA9-201ENST00000343483 MDGA2Q7Z553 956 aa16.64■□□□□ 0.25
HOXA9-201ENST00000343483 OR1J4Q8NGS1 313 aa16.64■□□□□ 0.25
HOXA9-201ENST00000343483 ZNF671Q8TAW3 534 aa16.64■□□□□ 0.25
HOXA9-201ENST00000343483 SLC25A43Q8WUT9 341 aaPredicted RBP16.64■□□□□ 0.25
HOXA9-201ENST00000343483 ASB17Q8WXJ9 295 aa16.64■□□□□ 0.25
HOXA9-201ENST00000343483 KCNK17Q96T54 332 aa16.64■□□□□ 0.25
HOXA9-201ENST00000343483 BEX2Q9BXY8 128 aa16.64■□□□□ 0.25
HOXA9-201ENST00000343483 ABCG5Q9H222 651 aa16.64■□□□□ 0.25
HOXA9-201ENST00000343483 PROK2Q9HC23 129 aa16.64■□□□□ 0.25
HOXA9-201ENST00000343483 SH2D2AQ9NP31 389 aa16.64■□□□□ 0.25
HOXA9-201ENST00000343483 B3GAT1Q9P2W7 334 aa16.64■□□□□ 0.25
HOXA9-201ENST00000343483 FREM2Q5SZK8 3169 aa16.64■□□□□ 0.25
HOXA9-201ENST00000343483 PIN1P1O15428 100 aa16.63■□□□□ 0.25
HOXA9-201ENST00000343483 HPP00738 406 aa16.63■□□□□ 0.25
HOXA9-201ENST00000343483 LIFP15018 202 aa16.63■□□□□ 0.25
HOXA9-201ENST00000343483 MRPS15P82914 257 aaKnown RBP16.63■□□□□ 0.25
HOXA9-201ENST00000343483 CD83Q01151 205 aa16.63■□□□□ 0.25
HOXA9-201ENST00000343483 ODF4Q2M2E3 257 aa16.63■□□□□ 0.25
HOXA9-201ENST00000343483 TMEM164Q5U3C3 297 aa16.63■□□□□ 0.25
HOXA9-201ENST00000343483 B3GNTL1Q67FW5 361 aaPredicted RBP16.63■□□□□ 0.25
HOXA9-201ENST00000343483 FYTTD1Q96QD9 318 aaKnown RBP16.63■□□□□ 0.25
HOXA9-201ENST00000343483 CDC6Q99741 560 aa16.63■□□□□ 0.25
HOXA9-201ENST00000343483 SLC25A18Q9H1K4 315 aa16.63■□□□□ 0.25
HOXA9-201ENST00000343483 ELOVL3Q9HB03 270 aa16.63■□□□□ 0.25
HOXA9-201ENST00000343483 SPATA2Q9UM82 520 aa16.63■□□□□ 0.25
HOXA9-201ENST00000343483 A0A087WZY1 265 aa16.63■□□□□ 0.25
HOXA9-201ENST00000343483 PDCD5O14737 125 aa16.63■□□□□ 0.25
HOXA9-201ENST00000343483 UBL3O95164 117 aa16.63■□□□□ 0.25
HOXA9-201ENST00000343483 AGFG1P52594 562 aaKnown RBP16.63■□□□□ 0.25
HOXA9-201ENST00000343483 EIF2B1Q14232 305 aaKnown RBP16.63■□□□□ 0.25
HOXA9-201ENST00000343483 STPG1Q5TH74 334 aa16.63■□□□□ 0.25
HOXA9-201ENST00000343483 RAET1LQ5VY80 246 aa16.63■□□□□ 0.25
HOXA9-201ENST00000343483 KRT74Q7RTS7 529 aa16.63■□□□□ 0.25
HOXA9-201ENST00000343483 UEVLDQ8IX04 471 aa16.63■□□□□ 0.25
HOXA9-201ENST00000343483 GTPBP8Q8N3Z3 284 aaPredicted RBP16.63■□□□□ 0.25
HOXA9-201ENST00000343483 OR2G2Q8NGZ5 317 aa16.63■□□□□ 0.25
HOXA9-201ENST00000343483 OR8B4Q96RC9 309 aa16.63■□□□□ 0.25
HOXA9-201ENST00000343483 SPRY4Q9C004 299 aa16.63■□□□□ 0.25
HOXA9-201ENST00000343483 P4HTMQ9NXG6 502 aa16.63■□□□□ 0.25
HOXA9-201ENST00000343483 DKKL1Q9UK85 242 aa16.63■□□□□ 0.25
HOXA9-201ENST00000343483 MRPS7Q9Y2R9 242 aaKnown RBP16.63■□□□□ 0.25
HOXA9-201ENST00000343483 CACNG2Q9Y698 323 aa16.63■□□□□ 0.25
HOXA9-201ENST00000343483 CCDC187A0A096LP49 1063 aa16.62■□□□□ 0.25
HOXA9-201ENST00000343483 CENPBD1B2RD01 187 aa16.62■□□□□ 0.25
HOXA9-201ENST00000343483 INMT-MINDY4F8WBC2 141 aa16.62■□□□□ 0.25
HOXA9-201ENST00000343483 SLC6A1P30531 599 aa16.62■□□□□ 0.25
HOXA9-201ENST00000343483 PITPNAQ00169 270 aa16.62■□□□□ 0.25
HOXA9-201ENST00000343483 HACD4Q5VWC8 232 aa16.62■□□□□ 0.25
HOXA9-201ENST00000343483 ARMC10Q8N2F6 343 aa16.62■□□□□ 0.25
HOXA9-201ENST00000343483 ZNF676Q8N7Q3 588 aa16.62■□□□□ 0.25
HOXA9-201ENST00000343483 LGALS14Q8TCE9 139 aa16.62■□□□□ 0.25
HOXA9-201ENST00000343483 CREB3L1Q96BA8 519 aa16.62■□□□□ 0.25
HOXA9-201ENST00000343483 DERL3Q96Q80 235 aa16.62■□□□□ 0.25
HOXA9-201ENST00000343483 FANCFQ9NPI8 374 aa16.62■□□□□ 0.25
HOXA9-201ENST00000343483 IGKV1D-43A0A0B4J1Z2 117 aa16.61■□□□□ 0.25
HOXA9-201ENST00000343483 SULT2B1O00204 365 aa16.61■□□□□ 0.25
HOXA9-201ENST00000343483 GSTT2P0CG29 244 aa16.61■□□□□ 0.25
HOXA9-201ENST00000343483 GSTT2BP0CG30 244 aa16.61■□□□□ 0.25
HOXA9-201ENST00000343483 ZNF823P16415 610 aa16.61■□□□□ 0.25
HOXA9-201ENST00000343483 SOX2P48431 317 aa16.61■□□□□ 0.25
HOXA9-201ENST00000343483 SRP9P49458 86 aaKnown RBP16.61■□□□□ 0.25
HOXA9-201ENST00000343483 DSCR4P56555 118 aaPredicted RBP16.61■□□□□ 0.25
HOXA9-201ENST00000343483 RSPO4Q2I0M5 234 aaPredicted RBP16.61■□□□□ 0.25
HOXA9-201ENST00000343483 RNASE12Q5GAN4 147 aaKnown RBP16.61■□□□□ 0.25
HOXA9-201ENST00000343483 TMEM225Q6GV28 225 aa16.61■□□□□ 0.25
HOXA9-201ENST00000343483 ESPNLQ6ZVH7 1005 aa16.61■□□□□ 0.25
HOXA9-201ENST00000343483 KRT77Q7Z794 578 aa16.61■□□□□ 0.25
HOXA9-201ENST00000343483 ZNF679Q8IYX0 411 aa16.61■□□□□ 0.25
HOXA9-201ENST00000343483 ZFP3Q96NJ6 502 aa16.61■□□□□ 0.25
HOXA9-201ENST00000343483 COMMD4Q9H0A8 199 aa16.61■□□□□ 0.25
HOXA9-201ENST00000343483 GTF2A1LQ9UNN4 478 aa16.61■□□□□ 0.25
HOXA9-201ENST00000343483 HDGFL3Q9Y3E1 203 aa16.61■□□□□ 0.25
HOXA9-201ENST00000343483 OR4C45A6NMZ5 311 aa16.61■□□□□ 0.25
HOXA9-201ENST00000343483 ZNF814B7Z6K7 855 aa16.61■□□□□ 0.25
HOXA9-201ENST00000343483 H3BSH0 61 aa16.61■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 62.4 ms