RNA–Protein interactions for RNA: ENST00000340648.5

RRP1B-201, Transcript of ribosomal RNA processing 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RRP1B, Length 5,090 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RRP1B-201ENST00000340648 BIDP55957 195 aa13.53□□□□□ -0.24
RRP1B-201ENST00000340648 UBE2KP61086 200 aa13.53□□□□□ -0.24
RRP1B-201ENST00000340648 PLGLB1Q02325 96 aa13.53□□□□□ -0.24
RRP1B-201ENST00000340648 MFGE8Q08431 387 aaPredicted RBP13.53□□□□□ -0.24
RRP1B-201ENST00000340648 FBXW12Q6X9E4 464 aa13.53□□□□□ -0.24
RRP1B-201ENST00000340648 FAM71CQ8NEG0 241 aa13.53□□□□□ -0.24
RRP1B-201ENST00000340648 PPP1R1CQ8WVI7 109 aa13.53□□□□□ -0.24
RRP1B-201ENST00000340648 C10orf90Q96M02 699 aa13.53□□□□□ -0.24
RRP1B-201ENST00000340648 KCNG2Q9UJ96 466 aa13.53□□□□□ -0.24
RRP1B-201ENST00000340648 WIF1Q9Y5W5 379 aa13.53□□□□□ -0.24
RRP1B-201ENST00000340648 HNRNPKP61978 463 aaKnown RBP eCLIP13.53□□□□□ -0.24
RRP1B-201ENST00000340648 PLP2Q04941 152 aa13.53□□□□□ -0.24
RRP1B-201ENST00000340648 SFRP5Q5T4F7 317 aa13.53□□□□□ -0.24
RRP1B-201ENST00000340648 ADAM5Q6NVV9 412 aa13.53□□□□□ -0.24
RRP1B-201ENST00000340648 KIAA0907Q7Z7F0 614 aaPredicted RBP13.53□□□□□ -0.24
RRP1B-201ENST00000340648 HSD17B8Q92506 261 aa13.53□□□□□ -0.24
RRP1B-201ENST00000340648 HAS2Q92819 552 aa13.53□□□□□ -0.24
RRP1B-201ENST00000340648 UQCC2Q9BRT2 126 aa13.53□□□□□ -0.24
RRP1B-201ENST00000340648 COL4A5P29400 1685 aa13.53□□□□□ -0.24
RRP1B-201ENST00000340648 SMCO3A2RU48 225 aa13.53□□□□□ -0.24
RRP1B-201ENST00000340648 TBX19O60806 448 aa13.53□□□□□ -0.24
RRP1B-201ENST00000340648 NDUFB6O95139 128 aa13.53□□□□□ -0.24
RRP1B-201ENST00000340648 CD80P33681 288 aa13.53□□□□□ -0.24
RRP1B-201ENST00000340648 MAP2K6P52564 334 aa13.53□□□□□ -0.24
RRP1B-201ENST00000340648 EPHA4P54764 986 aa13.53□□□□□ -0.24
RRP1B-201ENST00000340648 THSD4Q6ZMP0 1018 aa13.53□□□□□ -0.24
RRP1B-201ENST00000340648 RTL10Q7L3V2 364 aa13.53□□□□□ -0.24
RRP1B-201ENST00000340648 DND1Q8IYX4 353 aaKnown RBP13.53□□□□□ -0.24
RRP1B-201ENST00000340648 BCORP1Q8N888 145 aa13.53□□□□□ -0.24
RRP1B-201ENST00000340648 MORN4Q8NDC4 146 aa13.53□□□□□ -0.24
RRP1B-201ENST00000340648 OR2G2Q8NGZ5 317 aa13.53□□□□□ -0.24
RRP1B-201ENST00000340648 TOE1Q96GM8 510 aaKnown RBP13.53□□□□□ -0.24
RRP1B-201ENST00000340648 ADGRL4Q9HBW9 690 aa13.53□□□□□ -0.24
RRP1B-201ENST00000340648 EXOSC3Q9NQT5 275 aaKnown RBP13.53□□□□□ -0.24
RRP1B-201ENST00000340648 FBXO4Q9UKT5 387 aa13.53□□□□□ -0.24
RRP1B-201ENST00000340648 PCYT1BQ9Y5K3 369 aaPredicted RBP13.53□□□□□ -0.24
RRP1B-201ENST00000340648 POM121BA6NF01 834 aa13.53□□□□□ -0.24
RRP1B-201ENST00000340648 XRCC3O43542 346 aa13.53□□□□□ -0.24
RRP1B-201ENST00000340648 LANCL1O43813 399 aa13.53□□□□□ -0.24
RRP1B-201ENST00000340648 BRINP1O60477 761 aa13.53□□□□□ -0.24
RRP1B-201ENST00000340648 IL5P05113 134 aa13.53□□□□□ -0.24
RRP1B-201ENST00000340648 THBS2P35442 1172 aa13.53□□□□□ -0.24
RRP1B-201ENST00000340648 OR1J2Q8NGS2 313 aa13.53□□□□□ -0.24
RRP1B-201ENST00000340648 CCL4L1Q8NHW4 92 aa13.53□□□□□ -0.24
RRP1B-201ENST00000340648 SGCZQ96LD1 299 aa13.53□□□□□ -0.24
RRP1B-201ENST00000340648 LINC00052Q96N35 136 aa13.53□□□□□ -0.24
RRP1B-201ENST00000340648 C1QTNF6Q9BXI9 259 aa13.53□□□□□ -0.24
RRP1B-201ENST00000340648 FOXJ3Q9UPW0 622 aa13.53□□□□□ -0.24
RRP1B-201ENST00000340648 ZNF175Q9Y473 711 aa13.53□□□□□ -0.24
RRP1B-201ENST00000340648 IDSB3KWA1 339 aa13.52□□□□□ -0.24
RRP1B-201ENST00000340648 PRSS44E7EML9 344 aa13.52□□□□□ -0.24
RRP1B-201ENST00000340648 ITGB2P05107 769 aa13.52□□□□□ -0.24
RRP1B-201ENST00000340648 PI3P19957 117 aa13.52□□□□□ -0.24
RRP1B-201ENST00000340648 PSMB6P28072 239 aa13.52□□□□□ -0.24
RRP1B-201ENST00000340648 RAG2P55895 527 aa13.52□□□□□ -0.24
RRP1B-201ENST00000340648 RPL27P61353 136 aaKnown RBP13.52□□□□□ -0.24
RRP1B-201ENST00000340648 DCAF7P61962 342 aa13.52□□□□□ -0.24
RRP1B-201ENST00000340648 KCNAB1Q14722 419 aa13.52□□□□□ -0.24
RRP1B-201ENST00000340648 CMTM1Q8IZ96 169 aa13.52□□□□□ -0.24
RRP1B-201ENST00000340648 RCBTB1Q8NDN9 531 aa13.52□□□□□ -0.24
RRP1B-201ENST00000340648 TCTN2Q96GX1 697 aa13.52□□□□□ -0.24
RRP1B-201ENST00000340648 OR10A2Q9H208 303 aa13.52□□□□□ -0.24
RRP1B-201ENST00000340648 C6orf106Q9H6K1 298 aaPredicted RBP13.52□□□□□ -0.24
RRP1B-201ENST00000340648 DEFA6Q01524 100 aa13.52□□□□□ -0.24
RRP1B-201ENST00000340648 TOX2Q96NM4 488 aa13.52□□□□□ -0.24
RRP1B-201ENST00000340648 MAP3K3Q99759 626 aa13.52□□□□□ -0.24
RRP1B-201ENST00000340648 DHCR7Q9UBM7 475 aaKnown RBP13.52□□□□□ -0.24
RRP1B-201ENST00000340648 ERVH48-1M5A8F1 160 aa13.52□□□□□ -0.25
RRP1B-201ENST00000340648 SOHLH1Q5JUK2 328 aa13.52□□□□□ -0.25
RRP1B-201ENST00000340648 ZNF687Q8N1G0 1237 aa13.52□□□□□ -0.25
RRP1B-201ENST00000340648 LRRC18Q8N456 261 aa13.52□□□□□ -0.25
RRP1B-201ENST00000340648 C2orf72A6NCS6 295 aa13.52□□□□□ -0.25
RRP1B-201ENST00000340648 SERPINE2P07093 398 aa13.52□□□□□ -0.25
RRP1B-201ENST00000340648 DBHP09172 617 aa13.52□□□□□ -0.25
RRP1B-201ENST00000340648 HOXB3P14651 431 aaPredicted RBP13.52□□□□□ -0.25
RRP1B-201ENST00000340648 CLINT1Q14677 625 aa13.52□□□□□ -0.25
RRP1B-201ENST00000340648 HMGN3Q15651 99 aa13.52□□□□□ -0.25
RRP1B-201ENST00000340648 C1orf140Q5VVS0 124 aa13.52□□□□□ -0.25
RRP1B-201ENST00000340648 RNLSQ5VYX0 342 aa13.52□□□□□ -0.25
RRP1B-201ENST00000340648 PRR18Q8N4B5 295 aa13.52□□□□□ -0.25
RRP1B-201ENST00000340648 OR4D9Q8NGE8 314 aa13.52□□□□□ -0.25
RRP1B-201ENST00000340648 OR52H1Q8NGJ2 320 aa13.52□□□□□ -0.25
RRP1B-201ENST00000340648 RLN3Q8WXF3 142 aa13.52□□□□□ -0.25
RRP1B-201ENST00000340648 PCDHGA1Q9Y5H4 931 aa13.52□□□□□ -0.25
RRP1B-201ENST00000340648 CASRP41180 1078 aa13.51□□□□□ -0.25
RRP1B-201ENST00000340648 ACKR1Q16570 336 aa13.51□□□□□ -0.25
RRP1B-201ENST00000340648 EIF2S3LQ2VIR3 472 aaKnown RBP13.51□□□□□ -0.25
RRP1B-201ENST00000340648 CXorf58Q96LI9 332 aa13.51□□□□□ -0.25
RRP1B-201ENST00000340648 SPACA5Q96QH8 159 aa13.51□□□□□ -0.25
RRP1B-201ENST00000340648 GPA33Q99795 319 aa13.51□□□□□ -0.25
RRP1B-201ENST00000340648 CHRDQ9H2X0 955 aa13.51□□□□□ -0.25
RRP1B-201ENST00000340648 SLCO1C1Q9NYB5 712 aa13.51□□□□□ -0.25
RRP1B-201ENST00000340648 GREB1LQ9C091 1923 aaPredicted RBP13.51□□□□□ -0.25
RRP1B-201ENST00000340648 ALOX5APP20292 161 aa13.51□□□□□ -0.25
RRP1B-201ENST00000340648 CORO6Q6QEF8 472 aa13.51□□□□□ -0.25
RRP1B-201ENST00000340648 TMPRSS11FQ6ZWK6 438 aa13.51□□□□□ -0.25
RRP1B-201ENST00000340648 LINC01555Q8NAE3 123 aa13.51□□□□□ -0.25
RRP1B-201ENST00000340648 RSPRY1Q96DX4 576 aa13.51□□□□□ -0.25
RRP1B-201ENST00000340648 SLC46A1Q96NT5 459 aa13.51□□□□□ -0.25
RRP1B-201ENST00000340648 NMNAT2Q9BZQ4 307 aa13.51□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms