RNA–Protein interactions for RNA: ENST00000308259.9

MSRB3-201, Transcript of methionine sulfoxide reductase B3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSRB3, Length 4,417 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSRB3-201ENST00000308259 UQCRC2P22695 453 aa9.56□□□□□ -0.88
MSRB3-201ENST00000308259 CDX1P47902 265 aaPredicted RBP9.56□□□□□ -0.88
MSRB3-201ENST00000308259 ILKQ13418 452 aa9.56□□□□□ -0.88
MSRB3-201ENST00000308259 PDE7AQ13946 482 aa9.56□□□□□ -0.88
MSRB3-201ENST00000308259 ARL6IP1Q15041 203 aa9.56□□□□□ -0.88
MSRB3-201ENST00000308259 UBALD2Q8IYN6 164 aa9.56□□□□□ -0.88
MSRB3-201ENST00000308259 SLC44A3Q8N4M1 653 aa9.56□□□□□ -0.88
MSRB3-201ENST00000308259 OR4D9Q8NGE8 314 aa9.56□□□□□ -0.88
MSRB3-201ENST00000308259 OSTF1Q92882 214 aa9.56□□□□□ -0.88
MSRB3-201ENST00000308259 OR14A2Q96R54 314 aa9.56□□□□□ -0.88
MSRB3-201ENST00000308259 CCDC3Q9BQI4 270 aa9.56□□□□□ -0.88
MSRB3-201ENST00000308259 C2orf88Q9BSF0 95 aa9.56□□□□□ -0.88
MSRB3-201ENST00000308259 UBQLN3Q9H347 655 aa9.56□□□□□ -0.88
MSRB3-201ENST00000308259 NELFAQ9H3P2 528 aa9.56□□□□□ -0.88
MSRB3-201ENST00000308259 FBXO7Q9Y3I1 522 aa9.56□□□□□ -0.88
MSRB3-201ENST00000308259 COLCA2A8K830 154 aa9.55□□□□□ -0.88
MSRB3-201ENST00000308259 DPM1O60762 260 aa9.55□□□□□ -0.88
MSRB3-201ENST00000308259 IFNA6P05013 189 aa9.55□□□□□ -0.88
MSRB3-201ENST00000308259 CLEC3BP05452 202 aa9.55□□□□□ -0.88
MSRB3-201ENST00000308259 TMIGD3P0DMS9 266 aaPredicted RBP9.55□□□□□ -0.88
MSRB3-201ENST00000308259 AKR1C4P17516 323 aa9.55□□□□□ -0.88
MSRB3-201ENST00000308259 MMP11P24347 488 aa9.55□□□□□ -0.88
MSRB3-201ENST00000308259 NAA10P41227 235 aaPredicted RBP9.55□□□□□ -0.88
MSRB3-201ENST00000308259 SLC10A1Q14973 349 aa9.55□□□□□ -0.88
MSRB3-201ENST00000308259 EBPQ15125 230 aaKnown RBP9.55□□□□□ -0.88
MSRB3-201ENST00000308259 FAM78AQ5JUQ0 283 aa9.55□□□□□ -0.88
MSRB3-201ENST00000308259 ZNF626Q68DY1 528 aa9.55□□□□□ -0.88
MSRB3-201ENST00000308259 CPOQ8IVL8 374 aa9.55□□□□□ -0.88
MSRB3-201ENST00000308259 FAM185AQ8N0U4 392 aa9.55□□□□□ -0.88
MSRB3-201ENST00000308259 ADPRHL1Q8NDY3 354 aa9.55□□□□□ -0.88
MSRB3-201ENST00000308259 OR11G2Q8NGC1 345 aa9.55□□□□□ -0.88
MSRB3-201ENST00000308259 OR13C5Q8NGS8 318 aa9.55□□□□□ -0.88
MSRB3-201ENST00000308259 PPP1R1CQ8WVI7 109 aa9.55□□□□□ -0.88
MSRB3-201ENST00000308259 TM4SF18Q96CE8 201 aa9.55□□□□□ -0.88
MSRB3-201ENST00000308259 ZG16BQ96DA0 208 aa9.55□□□□□ -0.88
MSRB3-201ENST00000308259 KIRREL1Q96J84 757 aa9.55□□□□□ -0.88
MSRB3-201ENST00000308259 SLC25A19Q9HC21 320 aa9.55□□□□□ -0.88
MSRB3-201ENST00000308259 LSM2Q9Y333 95 aaKnown RBP9.55□□□□□ -0.88
MSRB3-201ENST00000308259 SNRPGP15A8MWD9 76 aa9.55□□□□□ -0.88
MSRB3-201ENST00000308259 OR1F1O43749 312 aa9.55□□□□□ -0.88
MSRB3-201ENST00000308259 MOSPD3O75425 235 aa9.55□□□□□ -0.88
MSRB3-201ENST00000308259 AIFM1O95831 613 aa9.55□□□□□ -0.88
MSRB3-201ENST00000308259 RAC2P15153 192 aa9.55□□□□□ -0.88
MSRB3-201ENST00000308259 S100GP29377 79 aa9.55□□□□□ -0.88
MSRB3-201ENST00000308259 BTCP35070 178 aa9.55□□□□□ -0.88
MSRB3-201ENST00000308259 HTR5AP47898 357 aa9.55□□□□□ -0.88
MSRB3-201ENST00000308259 CAMLGP49069 296 aa9.55□□□□□ -0.88
MSRB3-201ENST00000308259 MMP15P51511 669 aa9.55□□□□□ -0.88
MSRB3-201ENST00000308259 SPRED2Q7Z698 418 aa9.55□□□□□ -0.88
MSRB3-201ENST00000308259 OR6T1Q8NGN1 323 aa9.55□□□□□ -0.88
MSRB3-201ENST00000308259 SMIM4Q8WVI0 70 aa9.55□□□□□ -0.88
MSRB3-201ENST00000308259 VWCEQ96DN2 955 aa9.55□□□□□ -0.88
MSRB3-201ENST00000308259 ACTRT3Q9BYD9 372 aa9.55□□□□□ -0.88
MSRB3-201ENST00000308259 PIPOXQ9P0Z9 390 aa9.55□□□□□ -0.88
MSRB3-201ENST00000308259 YBX2Q9Y2T7 364 aaKnown RBP9.55□□□□□ -0.88
MSRB3-201ENST00000308259 CHD9Q3L8U1 2897 aa9.55□□□□□ -0.88
MSRB3-201ENST00000308259 A0A1W2PPQ1 181 aa9.55□□□□□ -0.88
MSRB3-201ENST00000308259 DFFBO76075 338 aa9.55□□□□□ -0.88
MSRB3-201ENST00000308259 PGAM2P15259 253 aa9.55□□□□□ -0.88
MSRB3-201ENST00000308259 RPA2P15927 270 aa9.55□□□□□ -0.88
MSRB3-201ENST00000308259 ACAA2P42765 397 aaKnown RBP9.55□□□□□ -0.88
MSRB3-201ENST00000308259 PXNP49023 591 aaPredicted RBP9.55□□□□□ -0.88
MSRB3-201ENST00000308259 HMGA2P52926 109 aa9.55□□□□□ -0.88
MSRB3-201ENST00000308259 LASP1Q14847 261 aaKnown RBP9.55□□□□□ -0.88
MSRB3-201ENST00000308259 SLC36A2Q495M3 483 aa9.55□□□□□ -0.88
MSRB3-201ENST00000308259 TRIM61Q5EBN2 209 aa9.55□□□□□ -0.88
MSRB3-201ENST00000308259 RPTNQ6XPR3 784 aa9.55□□□□□ -0.88
MSRB3-201ENST00000308259 LANCL3Q6ZV70 420 aa9.55□□□□□ -0.88
MSRB3-201ENST00000308259 ERN2Q76MJ5 926 aaKnown RBP9.55□□□□□ -0.88
MSRB3-201ENST00000308259 BBS1Q8NFJ9 593 aa9.55□□□□□ -0.88
MSRB3-201ENST00000308259 ZBTB8AQ96BR9 441 aa9.55□□□□□ -0.88
MSRB3-201ENST00000308259 AIF1LQ9BQI0 150 aa9.55□□□□□ -0.88
MSRB3-201ENST00000308259 ARHGAP9Q9BRR9 750 aa9.55□□□□□ -0.88
MSRB3-201ENST00000308259 SELENOIQ9C0D9 397 aa9.55□□□□□ -0.88
MSRB3-201ENST00000308259 MMP26Q9NRE1 261 aa9.55□□□□□ -0.88
MSRB3-201ENST00000308259 NPFFR2Q9Y5X5 522 aa9.55□□□□□ -0.88
MSRB3-201ENST00000308259 KCNE3Q9Y6H6 103 aa9.55□□□□□ -0.88
MSRB3-201ENST00000308259 COL4A6Q14031 1691 aa9.55□□□□□ -0.88
MSRB3-201ENST00000308259 FOXE1O00358 373 aaPredicted RBP9.55□□□□□ -0.88
MSRB3-201ENST00000308259 PNLIPRP2P54317 469 aa9.55□□□□□ -0.88
MSRB3-201ENST00000308259 H2BFSP57053 126 aa9.55□□□□□ -0.88
MSRB3-201ENST00000308259 NCR3LG1Q68D85 454 aa9.55□□□□□ -0.88
MSRB3-201ENST00000308259 ABLIM2Q6H8Q1 611 aa9.55□□□□□ -0.88
MSRB3-201ENST00000308259 C19orf48Q6RUI8 117 aa9.55□□□□□ -0.88
MSRB3-201ENST00000308259 P4HA3Q7Z4N8 544 aa9.55□□□□□ -0.88
MSRB3-201ENST00000308259 OR4D6Q8NGJ1 314 aa9.55□□□□□ -0.88
MSRB3-201ENST00000308259 THEM6Q8WUY1 208 aa9.55□□□□□ -0.88
MSRB3-201ENST00000308259 HAVCR1Q96D42 359 aa9.55□□□□□ -0.88
MSRB3-201ENST00000308259 C16orf58Q96GQ5 468 aa9.55□□□□□ -0.88
MSRB3-201ENST00000308259 LRRC3BQ96PB8 259 aa9.55□□□□□ -0.88
MSRB3-201ENST00000308259 SGPP1Q9BX95 441 aa9.55□□□□□ -0.88
MSRB3-201ENST00000308259 TMPRSS13Q9BYE2 586 aa9.55□□□□□ -0.88
MSRB3-201ENST00000308259 TRAV18A0A075B6X5 111 aa9.54□□□□□ -0.88
MSRB3-201ENST00000308259 A0A087WV62 115 aa9.54□□□□□ -0.88
MSRB3-201ENST00000308259 SHISA3A0PJX4 238 aa9.54□□□□□ -0.88
MSRB3-201ENST00000308259 NPIPA2E9PIF3 369 aa9.54□□□□□ -0.88
MSRB3-201ENST00000308259 NPIPA5E9PKD4 350 aa9.54□□□□□ -0.88
MSRB3-201ENST00000308259 NPIPA3F8WFD2 350 aa9.54□□□□□ -0.88
MSRB3-201ENST00000308259 HYAL3O43820 417 aaPredicted RBP9.54□□□□□ -0.88
MSRB3-201ENST00000308259 GALR3O60755 368 aaPredicted RBP9.54□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms