RNA–Protein interactions for RNA: ENST00000238379.9

HDHD3-201, Transcript of haloacid dehalogenase like hydrolase domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDHD3, Length 1,834 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDHD3-201ENST00000238379 GLTPQ9NZD2 209 aa13.5□□□□□ -0.25
HDHD3-201ENST00000238379 CEP295Q9C0D2 2601 aa13.5□□□□□ -0.25
HDHD3-201ENST00000238379 LOC400499M0QZD8 3231 aa13.5□□□□□ -0.25
HDHD3-201ENST00000238379 ZNF407Q9C0G0 2248 aa13.5□□□□□ -0.25
HDHD3-201ENST00000238379 CYTIPO60759 359 aa13.5□□□□□ -0.25
HDHD3-201ENST00000238379 AQP8O94778 261 aa13.5□□□□□ -0.25
HDHD3-201ENST00000238379 ACTL6AO96019 429 aa13.5□□□□□ -0.25
HDHD3-201ENST00000238379 NR2C1P13056 603 aa13.5□□□□□ -0.25
HDHD3-201ENST00000238379 NTF4P34130 210 aa13.5□□□□□ -0.25
HDHD3-201ENST00000238379 SDC2P34741 201 aa13.5□□□□□ -0.25
HDHD3-201ENST00000238379 CSNK1A1P48729 337 aa13.5□□□□□ -0.25
HDHD3-201ENST00000238379 SELENOPP49908 381 aa13.5□□□□□ -0.25
HDHD3-201ENST00000238379 ZNF133P52736 654 aaPredicted RBP13.5□□□□□ -0.25
HDHD3-201ENST00000238379 SRYQ05066 204 aa13.5□□□□□ -0.25
HDHD3-201ENST00000238379 MRPL28Q13084 256 aaKnown RBP13.5□□□□□ -0.25
HDHD3-201ENST00000238379 EIF2B1Q14232 305 aaKnown RBP13.5□□□□□ -0.25
HDHD3-201ENST00000238379 PHYHD1Q5SRE7 291 aa13.5□□□□□ -0.25
HDHD3-201ENST00000238379 OR6Q1Q8NGQ2 317 aa13.5□□□□□ -0.25
HDHD3-201ENST00000238379 SNIP1Q8TAD8 396 aaKnown RBP13.5□□□□□ -0.25
HDHD3-201ENST00000238379 NEIL3Q8TAT5 605 aa13.5□□□□□ -0.25
HDHD3-201ENST00000238379 HAVCR2Q8TDQ0 301 aa13.5□□□□□ -0.25
HDHD3-201ENST00000238379 ST7LQ8TDW4 575 aa13.5□□□□□ -0.25
HDHD3-201ENST00000238379 DEFB127Q9H1M4 99 aa13.5□□□□□ -0.25
HDHD3-201ENST00000238379 MMP27Q9H306 513 aa13.5□□□□□ -0.25
HDHD3-201ENST00000238379 SNTG1Q9NSN8 517 aa13.5□□□□□ -0.25
HDHD3-201ENST00000238379 FOXD3Q9UJU5 478 aaPredicted RBP13.5□□□□□ -0.25
HDHD3-201ENST00000238379 LIPGQ9Y5X9 500 aa13.5□□□□□ -0.25
HDHD3-201ENST00000238379 CACNA1CQ13936 2221 aa13.5□□□□□ -0.25
HDHD3-201ENST00000238379 TRAV17A0A0B4J275 112 aa13.49□□□□□ -0.25
HDHD3-201ENST00000238379 HSPB2A8KAH6 182 aa13.49□□□□□ -0.25
HDHD3-201ENST00000238379 RPP14O95059 124 aaKnown RBP13.49□□□□□ -0.25
HDHD3-201ENST00000238379 WNT11O96014 354 aa13.49□□□□□ -0.25
HDHD3-201ENST00000238379 CLEC2LP0C7M8 214 aa13.49□□□□□ -0.25
HDHD3-201ENST00000238379 SOX6P35712 828 aa13.49□□□□□ -0.25
HDHD3-201ENST00000238379 OPRL1P41146 370 aa13.49□□□□□ -0.25
HDHD3-201ENST00000238379 BMXP51813 675 aa13.49□□□□□ -0.25
HDHD3-201ENST00000238379 RPS11P62280 158 aaKnown RBP eCLIP13.49□□□□□ -0.25
HDHD3-201ENST00000238379 HSPB2Q16082 182 aa13.49□□□□□ -0.25
HDHD3-201ENST00000238379 KCTD18Q6PI47 426 aaPredicted RBP13.49□□□□□ -0.25
HDHD3-201ENST00000238379 LRRN1Q6UXK5 716 aa13.49□□□□□ -0.25
HDHD3-201ENST00000238379 FCRLAQ7L513 359 aa13.49□□□□□ -0.25
HDHD3-201ENST00000238379 ZNF679Q8IYX0 411 aa13.49□□□□□ -0.25
HDHD3-201ENST00000238379 MEIOBQ8N635 442 aa13.49□□□□□ -0.25
HDHD3-201ENST00000238379 OR6N1Q8NGY5 312 aa13.49□□□□□ -0.25
HDHD3-201ENST00000238379 OR52N5Q8NH56 324 aa13.49□□□□□ -0.25
HDHD3-201ENST00000238379 ZNF775Q96BV0 537 aaPredicted RBP13.49□□□□□ -0.25
HDHD3-201ENST00000238379 MAP6Q96JE9 813 aa13.49□□□□□ -0.25
HDHD3-201ENST00000238379 PDCD1LG2Q9BQ51 273 aa13.49□□□□□ -0.25
HDHD3-201ENST00000238379 PPIL3Q9H2H8 161 aaKnown RBP13.49□□□□□ -0.25
HDHD3-201ENST00000238379 KCNN2Q9H2S1 579 aa13.49□□□□□ -0.25
HDHD3-201ENST00000238379 TPK1Q9H3S4 243 aa13.49□□□□□ -0.25
HDHD3-201ENST00000238379 ELOVL3Q9HB03 270 aa13.49□□□□□ -0.25
HDHD3-201ENST00000238379 RCE1Q9Y256 329 aa13.49□□□□□ -0.25
HDHD3-201ENST00000238379 UGT2A1Q9Y4X1 527 aa13.49□□□□□ -0.25
HDHD3-201ENST00000238379 APC2O95996 2303 aa13.49□□□□□ -0.25
HDHD3-201ENST00000238379 DNAJC13O75165 2243 aa13.49□□□□□ -0.25
HDHD3-201ENST00000238379 A0A1W2PPL8 197 aa13.48□□□□□ -0.25
HDHD3-201ENST00000238379 SHISA3A0PJX4 238 aa13.48□□□□□ -0.25
HDHD3-201ENST00000238379 GPRIN2O60269 458 aa13.48□□□□□ -0.25
HDHD3-201ENST00000238379 ZFPL1O95159 310 aa13.48□□□□□ -0.25
HDHD3-201ENST00000238379 CDAP32320 146 aa13.48□□□□□ -0.25
HDHD3-201ENST00000238379 RORCP51449 518 aa13.48□□□□□ -0.25
HDHD3-201ENST00000238379 PMP22Q01453 160 aa13.48□□□□□ -0.25
HDHD3-201ENST00000238379 MXD1Q05195 221 aa13.48□□□□□ -0.25
HDHD3-201ENST00000238379 KCNMB1Q16558 191 aa13.48□□□□□ -0.25
HDHD3-201ENST00000238379 ACSM3Q53FZ2 586 aa13.48□□□□□ -0.25
HDHD3-201ENST00000238379 DCXRQ7Z4W1 244 aa13.48□□□□□ -0.25
HDHD3-201ENST00000238379 LINC00346Q8IVM7 164 aa13.48□□□□□ -0.25
HDHD3-201ENST00000238379 C20orf196Q8IYI0 205 aa13.48□□□□□ -0.25
HDHD3-201ENST00000238379 OR13C5Q8NGS8 318 aa13.48□□□□□ -0.25
HDHD3-201ENST00000238379 ABHD3Q8WU67 409 aa13.48□□□□□ -0.25
HDHD3-201ENST00000238379 SLC25A46Q96AG3 418 aa13.48□□□□□ -0.25
HDHD3-201ENST00000238379 INTS12Q96CB8 462 aaKnown RBP13.48□□□□□ -0.25
HDHD3-201ENST00000238379 MROQ9BYG7 248 aa13.48□□□□□ -0.25
HDHD3-201ENST00000238379 SEC61A2Q9H9S3 476 aa13.48□□□□□ -0.25
HDHD3-201ENST00000238379 FRRS1LQ9P0K9 344 aa13.48□□□□□ -0.25
HDHD3-201ENST00000238379 CYB5R1Q9UHQ9 305 aa13.48□□□□□ -0.25
HDHD3-201ENST00000238379 MSRB2Q9Y3D2 182 aa13.48□□□□□ -0.25
HDHD3-201ENST00000238379 CFAP47Q6ZTR5 3102 aa13.48□□□□□ -0.25
HDHD3-201ENST00000238379 TRGV5A0A0B4J1U4 118 aa13.48□□□□□ -0.25
HDHD3-201ENST00000238379 RASGEF1BQ0VAM2 473 aa13.48□□□□□ -0.25
HDHD3-201ENST00000238379 ALKBH1Q13686 389 aaKnown RBP13.48□□□□□ -0.25
HDHD3-201ENST00000238379 C10orf128Q5T292 105 aa13.48□□□□□ -0.25
HDHD3-201ENST00000238379 IGFL3Q6UXB1 125 aa13.48□□□□□ -0.25
HDHD3-201ENST00000238379 CEACAM19Q7Z692 300 aa13.48□□□□□ -0.25
HDHD3-201ENST00000238379 KRT77Q7Z794 578 aa13.48□□□□□ -0.25
HDHD3-201ENST00000238379 OR10H5Q8NGA6 315 aa13.48□□□□□ -0.25
HDHD3-201ENST00000238379 OR2G2Q8NGZ5 317 aa13.48□□□□□ -0.25
HDHD3-201ENST00000238379 ZFHX4Q86UP3 3567 aa13.47□□□□□ -0.25
HDHD3-201ENST00000238379 A0A075B6Q4 140 aa13.47□□□□□ -0.25
HDHD3-201ENST00000238379 TMCC2O75069 709 aa13.47□□□□□ -0.25
HDHD3-201ENST00000238379 FAM27D1Q5T7N8 215 aa13.47□□□□□ -0.25
HDHD3-201ENST00000238379 FDX2Q6P4F2 183 aa13.47□□□□□ -0.25
HDHD3-201ENST00000238379 CORO6Q6QEF8 472 aa13.47□□□□□ -0.25
HDHD3-201ENST00000238379 SPATC1Q76KD6 591 aa13.47□□□□□ -0.25
HDHD3-201ENST00000238379 RNF128Q8TEB7 428 aa13.47□□□□□ -0.25
HDHD3-201ENST00000238379 PNPLA2Q96AD5 504 aa13.47□□□□□ -0.25
HDHD3-201ENST00000238379 LDAHQ9H6V9 325 aa13.47□□□□□ -0.25
HDHD3-201ENST00000238379 EMC7Q9NPA0 242 aa13.47□□□□□ -0.25
HDHD3-201ENST00000238379 POLE4Q9NR33 117 aa13.47□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms