RNA–Protein interactions for RNA: ENSMUST00000042717.12

Trim39-201, Transcript of E3 ubiquitin-protein ligase TRIM39, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim39, Length 3,085 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim39-201ENSMUST00000042717 Cln8Q9QUK3 288 aa7.83□□□□□ -1.16
Trim39-201ENSMUST00000042717 Ing1Q9QXV3 279 aa7.83□□□□□ -1.16
Trim39-201ENSMUST00000042717 Rasgef1aA0A0N4SVR5 498 aa7.82□□□□□ -1.16
Trim39-201ENSMUST00000042717 Smok4aA0JLX3 433 aa7.82□□□□□ -1.16
Trim39-201ENSMUST00000042717 E030025P04RikA2A6V5 185 aa7.82□□□□□ -1.16
Trim39-201ENSMUST00000042717 Olfr1040A2ARY1 313 aa7.82□□□□□ -1.16
Trim39-201ENSMUST00000042717 C1dO35473 141 aa7.82□□□□□ -1.16
Trim39-201ENSMUST00000042717 Igk-V19-17P01633 149 aa7.82□□□□□ -1.16
Trim39-201ENSMUST00000042717 Tuba3aP05214 450 aaKnown RBP7.82□□□□□ -1.16
Trim39-201ENSMUST00000042717 Gsta1P13745 223 aa7.82□□□□□ -1.16
Trim39-201ENSMUST00000042717 LvrnQ2KHK3 559 aa7.82□□□□□ -1.16
Trim39-201ENSMUST00000042717 Isg20l2Q3U1G5 368 aaKnown RBP7.82□□□□□ -1.16
Trim39-201ENSMUST00000042717 Wbp4Q61048 376 aa7.82□□□□□ -1.16
Trim39-201ENSMUST00000042717 Kcnc3Q63959 769 aa7.82□□□□□ -1.16
Trim39-201ENSMUST00000042717 Lefty1Q64280 368 aa7.82□□□□□ -1.16
Trim39-201ENSMUST00000042717 Gsta1Q6P8Q0 223 aa7.82□□□□□ -1.16
Trim39-201ENSMUST00000042717 Olfr884Q7TRE1 309 aa7.82□□□□□ -1.16
Trim39-201ENSMUST00000042717 BtlaQ7TSA3 306 aa7.82□□□□□ -1.16
Trim39-201ENSMUST00000042717 Slc16a12Q8BGC3 486 aa7.82□□□□□ -1.16
Trim39-201ENSMUST00000042717 Dlec1Q8BLA1 635 aa7.82□□□□□ -1.16
Trim39-201ENSMUST00000042717 Zfp286Q8C0E6 519 aa7.82□□□□□ -1.16
Trim39-201ENSMUST00000042717 Tmem200aQ8C817 491 aa7.82□□□□□ -1.16
Trim39-201ENSMUST00000042717 Lysmd4Q8CC84 293 aa7.82□□□□□ -1.16
Trim39-201ENSMUST00000042717 Cpne5Q8JZW4 593 aa7.82□□□□□ -1.16
Trim39-201ENSMUST00000042717 Tma7Q8K003 64 aaKnown RBP7.82□□□□□ -1.16
Trim39-201ENSMUST00000042717 Mterf3Q8R3J4 412 aa7.82□□□□□ -1.16
Trim39-201ENSMUST00000042717 Olfr676Q8VGZ9 317 aa7.82□□□□□ -1.16
Trim39-201ENSMUST00000042717 Egln3Q91UZ4 239 aa7.82□□□□□ -1.16
Trim39-201ENSMUST00000042717 Asf1bQ9DAP7 202 aa7.82□□□□□ -1.16
Trim39-201ENSMUST00000042717 Slc38a3Q9DCP2 505 aa7.82□□□□□ -1.16
Trim39-201ENSMUST00000042717 Tor1aQ9ER39 333 aa7.82□□□□□ -1.16
Trim39-201ENSMUST00000042717 Vstm2bQ9JME9 285 aa7.82□□□□□ -1.16
Trim39-201ENSMUST00000042717 Slc39a1Q9QZ03 324 aa7.82□□□□□ -1.16
Trim39-201ENSMUST00000042717 Olfr1493-ps1A0A140LHU2 316 aa7.82□□□□□ -1.16
Trim39-201ENSMUST00000042717 Olfr1025-ps1A0A140T8K3 312 aa7.82□□□□□ -1.16
Trim39-201ENSMUST00000042717 Igkv6-14A0A140T8P1 115 aa7.82□□□□□ -1.16
Trim39-201ENSMUST00000042717 Olfr1193A2AV13 318 aa7.82□□□□□ -1.16
Trim39-201ENSMUST00000042717 Bbip1J3QMK2 67 aa7.82□□□□□ -1.16
Trim39-201ENSMUST00000042717 Gm8888J3QPX5 126 aa7.82□□□□□ -1.16
Trim39-201ENSMUST00000042717 P01746 140 aa7.82□□□□□ -1.16
Trim39-201ENSMUST00000042717 PrkcaP20444 672 aa7.82□□□□□ -1.16
Trim39-201ENSMUST00000042717 Pcbp4P57724 403 aaKnown RBP7.82□□□□□ -1.16
Trim39-201ENSMUST00000042717 Slc30a2Q2HJ10 371 aa7.82□□□□□ -1.16
Trim39-201ENSMUST00000042717 MlanaQ2TA50 113 aa7.82□□□□□ -1.16
Trim39-201ENSMUST00000042717 Grxcr2Q3TYR5 254 aa7.82□□□□□ -1.16
Trim39-201ENSMUST00000042717 Klhl21Q3U410 597 aa7.82□□□□□ -1.16
Trim39-201ENSMUST00000042717 Gm525Q3V3I5 90 aa7.82□□□□□ -1.16
Trim39-201ENSMUST00000042717 Zdhhc8Q5Y5T5 762 aa7.82□□□□□ -1.16
Trim39-201ENSMUST00000042717 Meig1Q61845 88 aa7.82□□□□□ -1.16
Trim39-201ENSMUST00000042717 Olfr1286Q7TQY2 305 aa7.82□□□□□ -1.16
Trim39-201ENSMUST00000042717 Olfr776Q7TRI3 312 aa7.82□□□□□ -1.16
Trim39-201ENSMUST00000042717 Slc26a11Q80ZD3 593 aa7.82□□□□□ -1.16
Trim39-201ENSMUST00000042717 Katnb1Q8BG40 658 aa7.82□□□□□ -1.16
Trim39-201ENSMUST00000042717 Txnl4bQ8BUH1 149 aa7.82□□□□□ -1.16
Trim39-201ENSMUST00000042717 Fam120cQ8C3F2 1091 aaKnown RBP7.82□□□□□ -1.16
Trim39-201ENSMUST00000042717 B4galt7Q8R087 327 aa7.82□□□□□ -1.16
Trim39-201ENSMUST00000042717 Olfr63Q8VBW9 316 aa7.82□□□□□ -1.16
Trim39-201ENSMUST00000042717 Olfr1020Q8VFK7 317 aa7.82□□□□□ -1.16
Trim39-201ENSMUST00000042717 Olfr24Q8VFM9 313 aa7.82□□□□□ -1.16
Trim39-201ENSMUST00000042717 Rnf167Q91XF4 347 aa7.82□□□□□ -1.16
Trim39-201ENSMUST00000042717 Taldo1Q93092 337 aa7.82□□□□□ -1.16
Trim39-201ENSMUST00000042717 Abcb8Q9CXJ4 717 aa7.82□□□□□ -1.16
Trim39-201ENSMUST00000042717 Mrps28Q9CY16 186 aa7.82□□□□□ -1.16
Trim39-201ENSMUST00000042717 Gabra4Q9D6F4 552 aa7.82□□□□□ -1.16
Trim39-201ENSMUST00000042717 Ndel1Q9ERR1 345 aa7.82□□□□□ -1.16
Trim39-201ENSMUST00000042717 Pex14Q9R0A0 376 aa7.82□□□□□ -1.16
Trim39-201ENSMUST00000042717 Oasl2Q9Z2F2 508 aa7.82□□□□□ -1.16
Trim39-201ENSMUST00000042717 2610044O15Rik8A0A087WRJ1 410 aa7.82□□□□□ -1.16
Trim39-201ENSMUST00000042717 Gm13102A2ASJ3 519 aa7.82□□□□□ -1.16
Trim39-201ENSMUST00000042717 Lcn11A2BHR2 178 aa7.82□□□□□ -1.16
Trim39-201ENSMUST00000042717 Gm21904A8HG57 180 aa7.82□□□□□ -1.16
Trim39-201ENSMUST00000042717 Gm436B1AVU6 407 aa7.82□□□□□ -1.16
Trim39-201ENSMUST00000042717 Gm21866J3QMH4 180 aa7.82□□□□□ -1.16
Trim39-201ENSMUST00000042717 Wnt4P22724 351 aa7.82□□□□□ -1.16
Trim39-201ENSMUST00000042717 StsP50427 624 aa7.82□□□□□ -1.16
Trim39-201ENSMUST00000042717 Lbx1P52955 282 aa7.82□□□□□ -1.16
Trim39-201ENSMUST00000042717 Nkx3-2P97503 333 aa7.82□□□□□ -1.16
Trim39-201ENSMUST00000042717 Hddc2Q3SXD3 199 aa7.82□□□□□ -1.16
Trim39-201ENSMUST00000042717 Spata13Q5DU57 656 aa7.82□□□□□ -1.16
Trim39-201ENSMUST00000042717 Epha1Q60750 977 aa7.82□□□□□ -1.16
Trim39-201ENSMUST00000042717 Gdi2Q61598 445 aaKnown RBP7.82□□□□□ -1.16
Trim39-201ENSMUST00000042717 Olfr885Q7TRE0 309 aa7.82□□□□□ -1.16
Trim39-201ENSMUST00000042717 Supv3l1Q80YD1 779 aaKnown RBP7.82□□□□□ -1.16
Trim39-201ENSMUST00000042717 A730061H03RikQ8BGD2 154 aa7.82□□□□□ -1.16
Trim39-201ENSMUST00000042717 Pamr1Q8BU25 720 aa7.82□□□□□ -1.16
Trim39-201ENSMUST00000042717 Cd276Q8VE98 316 aa7.82□□□□□ -1.16
Trim39-201ENSMUST00000042717 Olfr1484Q8VEU6 315 aa7.82□□□□□ -1.16
Trim39-201ENSMUST00000042717 Olfr828Q8VFM8 312 aa7.82□□□□□ -1.16
Trim39-201ENSMUST00000042717 Paip2bQ91W45 136 aa7.82□□□□□ -1.16
Trim39-201ENSMUST00000042717 Tmed9Q99KF1 235 aaKnown RBP7.82□□□□□ -1.16
Trim39-201ENSMUST00000042717 Riox1Q9JJF3 603 aa7.82□□□□□ -1.16
Trim39-201ENSMUST00000042717 Plag1Q9QYE0 499 aa7.82□□□□□ -1.16
Trim39-201ENSMUST00000042717 Olfr65A0A1B0GSF4 315 aa7.81□□□□□ -1.16
Trim39-201ENSMUST00000042717 Prr32A2AFE9 284 aa7.81□□□□□ -1.16
Trim39-201ENSMUST00000042717 Mtg2A2AFK4 405 aa7.81□□□□□ -1.16
Trim39-201ENSMUST00000042717 Calhm1D3Z291 348 aa7.81□□□□□ -1.16
Trim39-201ENSMUST00000042717 Gm16506F7ANP4 213 aa7.81□□□□□ -1.16
Trim39-201ENSMUST00000042717 Gm17174M0QWQ9 212 aa7.81□□□□□ -1.16
Trim39-201ENSMUST00000042717 Efna3O08545 230 aa7.81□□□□□ -1.16
Trim39-201ENSMUST00000042717 C3ar1O09047 477 aa7.81□□□□□ -1.16
Retrieved 100 of 22,080 RNA–protein pairs in 44 ms