RNA–Protein interactions for RNA: ENSMUST00000038514.14

Nup54-201, Transcript of Nuclear pore complex protein Nup54, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Nup54, Length 2,352 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Nup54-201ENSMUST00000038514 Tmem156A0A1D5RLR8 321 aa13.66□□□□□ -0.22
Nup54-201ENSMUST00000038514 Slco5a1E9PVD9 850 aa13.66□□□□□ -0.22
Nup54-201ENSMUST00000038514 Foxa1P35582 468 aa13.66□□□□□ -0.22
Nup54-201ENSMUST00000038514 Uck1P52623 277 aa13.66□□□□□ -0.22
Nup54-201ENSMUST00000038514 Sec61a1P61620 476 aaKnown RBP13.66□□□□□ -0.22
Nup54-201ENSMUST00000038514 Q149G0 166 aaKnown RBP13.66□□□□□ -0.22
Nup54-201ENSMUST00000038514 1700057G04RikQ3V0U0 232 aa13.66□□□□□ -0.22
Nup54-201ENSMUST00000038514 Rrm2bQ6PEE3 351 aa13.66□□□□□ -0.22
Nup54-201ENSMUST00000038514 Lpar4Q8BLG2 370 aa13.66□□□□□ -0.22
Nup54-201ENSMUST00000038514 Zfp101Q8BP18 612 aa13.66□□□□□ -0.22
Nup54-201ENSMUST00000038514 SbsnQ8CIT9 700 aa13.66□□□□□ -0.22
Nup54-201ENSMUST00000038514 Nfatc4Q8K120 901 aa13.66□□□□□ -0.22
Nup54-201ENSMUST00000038514 Vmn1r72Q8K3N7 306 aa13.66□□□□□ -0.22
Nup54-201ENSMUST00000038514 Olfr531Q8VGL2 304 aa13.66□□□□□ -0.22
Nup54-201ENSMUST00000038514 Clint1Q99KN9 631 aa13.66□□□□□ -0.22
Nup54-201ENSMUST00000038514 Vmn1r48Q9EQ52 302 aa13.66□□□□□ -0.22
Nup54-201ENSMUST00000038514 FastkQ9JIX9 511 aa13.66□□□□□ -0.22
Nup54-201ENSMUST00000038514 MNCb-2990Q9JJ93 142 aa13.66□□□□□ -0.22
Nup54-201ENSMUST00000038514 Phf1Q9Z1B8 559 aa13.66□□□□□ -0.22
Nup54-201ENSMUST00000038514 Parp4E9PYK3 1969 aa13.65□□□□□ -0.22
Nup54-201ENSMUST00000038514 Pom121l12A0A1B0GSJ4 278 aa13.65□□□□□ -0.22
Nup54-201ENSMUST00000038514 Klk1P15947 261 aa13.65□□□□□ -0.22
Nup54-201ENSMUST00000038514 Pax2P32114 414 aa13.65□□□□□ -0.22
Nup54-201ENSMUST00000038514 ArhgdigQ62160 225 aa13.65□□□□□ -0.22
Nup54-201ENSMUST00000038514 Tgfbr2Q62312 592 aa13.65□□□□□ -0.22
Nup54-201ENSMUST00000038514 TifaQ793I8 184 aa13.65□□□□□ -0.22
Nup54-201ENSMUST00000038514 Olfr517Q7TRU4 314 aa13.65□□□□□ -0.22
Nup54-201ENSMUST00000038514 Bdh1Q80XN0 343 aa13.65□□□□□ -0.22
Nup54-201ENSMUST00000038514 2810021J22RikQ8BIB6 539 aa13.65□□□□□ -0.22
Nup54-201ENSMUST00000038514 Comtd1Q8BIG7 262 aa13.65□□□□□ -0.22
Nup54-201ENSMUST00000038514 Lhfpl6Q8BM86 200 aa13.65□□□□□ -0.22
Nup54-201ENSMUST00000038514 Arfrp1Q8BXL7 201 aa13.65□□□□□ -0.22
Nup54-201ENSMUST00000038514 Fgd2Q8BY35 655 aa13.65□□□□□ -0.22
Nup54-201ENSMUST00000038514 Scmh1Q8K214 706 aa13.65□□□□□ -0.22
Nup54-201ENSMUST00000038514 Fam69bQ99ML4 431 aa13.65□□□□□ -0.22
Nup54-201ENSMUST00000038514 Six6Q9QZ28 246 aa13.65□□□□□ -0.22
Nup54-201ENSMUST00000038514 CalcrlQ9R1W5 463 aa13.65□□□□□ -0.22
Nup54-201ENSMUST00000038514 Cacna1eQ61290 2272 aa13.65□□□□□ -0.22
Nup54-201ENSMUST00000038514 Gm29797A0A140LIA7 188 aa13.65□□□□□ -0.22
Nup54-201ENSMUST00000038514 Spaca5A2AE20 160 aa13.65□□□□□ -0.22
Nup54-201ENSMUST00000038514 Pcdh17E9PXF0 1157 aa13.65□□□□□ -0.22
Nup54-201ENSMUST00000038514 Gm21876F6XK35 94 aa13.65□□□□□ -0.22
Nup54-201ENSMUST00000038514 Ogg1O08760 345 aa13.65□□□□□ -0.22
Nup54-201ENSMUST00000038514 Abcd4O89016 606 aa13.65□□□□□ -0.22
Nup54-201ENSMUST00000038514 Mep1aP28825 747 aa13.65□□□□□ -0.22
Nup54-201ENSMUST00000038514 Tbx4P70325 552 aa13.65□□□□□ -0.22
Nup54-201ENSMUST00000038514 Hoxc4Q08624 264 aa13.65□□□□□ -0.22
Nup54-201ENSMUST00000038514 Zfp987Q32P14 633 aa13.65□□□□□ -0.22
Nup54-201ENSMUST00000038514 4930512M02RikQ5SQK8 218 aa13.65□□□□□ -0.22
Nup54-201ENSMUST00000038514 Ptpn18Q61152 453 aa13.65□□□□□ -0.22
Nup54-201ENSMUST00000038514 Kcnc3Q63959 769 aa13.65□□□□□ -0.22
Nup54-201ENSMUST00000038514 Rcor3Q6PGA0 451 aa13.65□□□□□ -0.22
Nup54-201ENSMUST00000038514 Inca1Q6PKN7 231 aa13.65□□□□□ -0.22
Nup54-201ENSMUST00000038514 B630019K06RikQ7TNS5 333 aa13.65□□□□□ -0.22
Nup54-201ENSMUST00000038514 Gpatch2Q7TQC7 527 aa13.65□□□□□ -0.22
Nup54-201ENSMUST00000038514 Olfr1219Q7TR04 311 aa13.65□□□□□ -0.22
Nup54-201ENSMUST00000038514 Asphd2Q80VP9 343 aa13.65□□□□□ -0.22
Nup54-201ENSMUST00000038514 Vrk1Q80X41 440 aa13.65□□□□□ -0.22
Nup54-201ENSMUST00000038514 Znf775Q8BI73 538 aa13.65□□□□□ -0.22
Nup54-201ENSMUST00000038514 Gm9999Q8C5Y2 53 aa13.65□□□□□ -0.22
Nup54-201ENSMUST00000038514 Mrpl38Q8K2M0 380 aa13.65□□□□□ -0.22
Nup54-201ENSMUST00000038514 Ppp1r14cQ8R4S0 164 aa13.65□□□□□ -0.22
Nup54-201ENSMUST00000038514 Olfr644Q8VH21 314 aa13.65□□□□□ -0.22
Nup54-201ENSMUST00000038514 Slc39a8Q91W10 462 aa13.65□□□□□ -0.22
Nup54-201ENSMUST00000038514 Chmp1aQ921W0 196 aa13.65□□□□□ -0.22
Nup54-201ENSMUST00000038514 Gtpbp3Q923K4 492 aa13.65□□□□□ -0.22
Nup54-201ENSMUST00000038514 Sntb1Q99L88 537 aaKnown RBP13.65□□□□□ -0.22
Nup54-201ENSMUST00000038514 SvbpQ99LQ4 66 aa13.65□□□□□ -0.22
Nup54-201ENSMUST00000038514 Chmp1b2Q9CQD4 199 aa13.65□□□□□ -0.22
Nup54-201ENSMUST00000038514 Ethe1Q9DCM0 254 aa13.65□□□□□ -0.22
Nup54-201ENSMUST00000038514 Olfr944Q9EQ91 311 aa13.65□□□□□ -0.22
Nup54-201ENSMUST00000038514 Scnn1gQ9WU39 655 aa13.65□□□□□ -0.22
Nup54-201ENSMUST00000038514 Dock4P59764 1978 aa13.64□□□□□ -0.23
Nup54-201ENSMUST00000038514 Igkv17-127A0A0G2JDN5 117 aa13.64□□□□□ -0.23
Nup54-201ENSMUST00000038514 Olfr1109A2AT96 312 aa13.64□□□□□ -0.23
Nup54-201ENSMUST00000038514 Usp36B1AQJ2 1098 aaKnown RBP13.64□□□□□ -0.23
Nup54-201ENSMUST00000038514 Fam71dD3YV92 440 aa13.64□□□□□ -0.23
Nup54-201ENSMUST00000038514 Gm21560D3Z7A4 205 aa13.64□□□□□ -0.23
Nup54-201ENSMUST00000038514 Zfp820E9Q5G8 549 aa13.64□□□□□ -0.23
Nup54-201ENSMUST00000038514 Gm3099J3QPA5 205 aa13.64□□□□□ -0.23
Nup54-201ENSMUST00000038514 4930555G01RikL7N253 205 aa13.64□□□□□ -0.23
Nup54-201ENSMUST00000038514 Irs3O54718 495 aa13.64□□□□□ -0.23
Nup54-201ENSMUST00000038514 GhrhrP32082 423 aa13.64□□□□□ -0.23
Nup54-201ENSMUST00000038514 Them4Q3UUI3 230 aa13.64□□□□□ -0.23
Nup54-201ENSMUST00000038514 Ctf1Q60753 203 aa13.64□□□□□ -0.23
Nup54-201ENSMUST00000038514 Traf4Q61382 470 aa13.64□□□□□ -0.23
Nup54-201ENSMUST00000038514 NnatQ61979 81 aa13.64□□□□□ -0.23
Nup54-201ENSMUST00000038514 C730034F03RikQ8BGL5 111 aa13.64□□□□□ -0.23
Nup54-201ENSMUST00000038514 Fam221aQ8C790 301 aa13.64□□□□□ -0.23
Nup54-201ENSMUST00000038514 Phf21bQ8C966 487 aa13.64□□□□□ -0.23
Nup54-201ENSMUST00000038514 Olfr648Q8VG19 316 aa13.64□□□□□ -0.23
Nup54-201ENSMUST00000038514 Olfr676Q8VGZ9 317 aa13.64□□□□□ -0.23
Nup54-201ENSMUST00000038514 Bin3Q9JI08 253 aa13.64□□□□□ -0.23
Nup54-201ENSMUST00000038514 Chst11Q9JME2 352 aa13.64□□□□□ -0.23
Nup54-201ENSMUST00000038514 Cav2Q9WVC3 162 aa13.64□□□□□ -0.23
Nup54-201ENSMUST00000038514 Alms1Q8K4E0 3251 aa13.64□□□□□ -0.23
Nup54-201ENSMUST00000038514 Rarres1F6ZIS7 283 aa13.64□□□□□ -0.23
Nup54-201ENSMUST00000038514 Olfr889L7N1Y6 314 aa13.64□□□□□ -0.23
Nup54-201ENSMUST00000038514 Col19a1Q0VF58 1136 aa13.64□□□□□ -0.23
Nup54-201ENSMUST00000038514 St3gal2Q11204 350 aa13.64□□□□□ -0.23
Retrieved 100 of 22,080 RNA–protein pairs in 11.9 ms