RNA–Protein interactions for RNA: ENSMUST00000022220.12

Msh3-201, Transcript of DNA mismatch repair protein Msh3, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Msh3, Length 3,937 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Msh3-201ENSMUST00000022220 Dnajc13D4AFX7 2248 aaKnown RBP9.98□□□□□ -0.81
Msh3-201ENSMUST00000022220 Gm2022A0A1Y7VLT7 144 aa9.98□□□□□ -0.81
Msh3-201ENSMUST00000022220 Fbxw24E9PXM9 466 aa9.98□□□□□ -0.81
Msh3-201ENSMUST00000022220 9330182O14RikJ3QNB2 140 aa9.98□□□□□ -0.81
Msh3-201ENSMUST00000022220 Capn1O35350 713 aa9.98□□□□□ -0.81
Msh3-201ENSMUST00000022220 Pmm1O35621 262 aa9.98□□□□□ -0.81
Msh3-201ENSMUST00000022220 EdaO54693 391 aa9.98□□□□□ -0.81
Msh3-201ENSMUST00000022220 Muc13P19467 573 aa9.98□□□□□ -0.81
Msh3-201ENSMUST00000022220 Ube2mP61082 183 aaKnown RBP9.98□□□□□ -0.81
Msh3-201ENSMUST00000022220 Nhlh1Q02576 133 aa9.98□□□□□ -0.81
Msh3-201ENSMUST00000022220 Plpp5Q3UMZ3 260 aa9.98□□□□□ -0.81
Msh3-201ENSMUST00000022220 Fbxw16Q497Z0 464 aa9.98□□□□□ -0.81
Msh3-201ENSMUST00000022220 Camk2dQ6PHZ2 499 aa9.98□□□□□ -0.81
Msh3-201ENSMUST00000022220 Hsh2dQ6VYH9 334 aa9.98□□□□□ -0.81
Msh3-201ENSMUST00000022220 Olfr1058Q7TR74 316 aa9.98□□□□□ -0.81
Msh3-201ENSMUST00000022220 2610318N02RikQ80VT5 305 aa9.98□□□□□ -0.81
Msh3-201ENSMUST00000022220 Mrps26Q80ZS3 200 aa9.98□□□□□ -0.81
Msh3-201ENSMUST00000022220 NrrosQ8BMT4 693 aa9.98□□□□□ -0.81
Msh3-201ENSMUST00000022220 Vmn1r228Q8R2A7 333 aa9.98□□□□□ -0.81
Msh3-201ENSMUST00000022220 Efcab7Q8VDY4 628 aa9.98□□□□□ -0.81
Msh3-201ENSMUST00000022220 Olfr1423Q8VFV0 310 aa9.98□□□□□ -0.81
Msh3-201ENSMUST00000022220 Chrm5Q920H4 532 aa9.98□□□□□ -0.81
Msh3-201ENSMUST00000022220 Exosc5Q9CRA8 235 aa9.98□□□□□ -0.81
Msh3-201ENSMUST00000022220 Dimt1Q9D0D4 313 aaKnown RBP9.98□□□□□ -0.81
Msh3-201ENSMUST00000022220 Slc46a3Q9DC26 460 aa9.98□□□□□ -0.81
Msh3-201ENSMUST00000022220 Srebf1Q9WTN3 1134 aa9.98□□□□□ -0.81
Msh3-201ENSMUST00000022220 Gm13539A0A1B0GSM6 183 aa9.98□□□□□ -0.81
Msh3-201ENSMUST00000022220 4930563M21RikA0A1L1SUT5 578 aa9.98□□□□□ -0.81
Msh3-201ENSMUST00000022220 Olfr1193A2AV13 318 aa9.98□□□□□ -0.81
Msh3-201ENSMUST00000022220 Gm45711E0CXA2 391 aa9.98□□□□□ -0.81
Msh3-201ENSMUST00000022220 Pcdh17E9PXF0 1157 aa9.98□□□□□ -0.81
Msh3-201ENSMUST00000022220 Csf1P07141 552 aa9.98□□□□□ -0.81
Msh3-201ENSMUST00000022220 Snai2P97469 269 aa9.98□□□□□ -0.81
Msh3-201ENSMUST00000022220 KcnrgQ2TUM3 264 aa9.98□□□□□ -0.81
Msh3-201ENSMUST00000022220 Fam196aQ3USH1 422 aa9.98□□□□□ -0.81
Msh3-201ENSMUST00000022220 Tas2r143Q7TQB9 293 aa9.98□□□□□ -0.81
Msh3-201ENSMUST00000022220 Olfr1225Q7TR01 311 aa9.98□□□□□ -0.81
Msh3-201ENSMUST00000022220 Fahd1Q8R0F8 227 aa9.98□□□□□ -0.81
Msh3-201ENSMUST00000022220 Plet1Q8VEN2 237 aa9.98□□□□□ -0.81
Msh3-201ENSMUST00000022220 Olfr1512Q8VF72 313 aa9.98□□□□□ -0.81
Msh3-201ENSMUST00000022220 Olfr935Q8VG16 308 aa9.98□□□□□ -0.81
Msh3-201ENSMUST00000022220 Gdpd3Q99LY2 330 aa9.98□□□□□ -0.81
Msh3-201ENSMUST00000022220 Tktl1Q99MX0 595 aa9.98□□□□□ -0.81
Msh3-201ENSMUST00000022220 Otub2Q9CQX0 234 aa9.98□□□□□ -0.81
Msh3-201ENSMUST00000022220 C1galt1Q9JJ06 363 aa9.98□□□□□ -0.81
Msh3-201ENSMUST00000022220 H2afb3S4R1G7 115 aa9.98□□□□□ -0.81
Msh3-201ENSMUST00000022220 Gm45861A0A1B0GRY3 1923 aa9.97□□□□□ -0.81
Msh3-201ENSMUST00000022220 Olfr427E9Q7E7 315 aa9.97□□□□□ -0.81
Msh3-201ENSMUST00000022220 Sp100O35892 482 aa9.97□□□□□ -0.81
Msh3-201ENSMUST00000022220 Sp3O70494 783 aa9.97□□□□□ -0.81
Msh3-201ENSMUST00000022220 Hsd17b12O70503 312 aa9.97□□□□□ -0.81
Msh3-201ENSMUST00000022220 Il6P08505 211 aa9.97□□□□□ -0.81
Msh3-201ENSMUST00000022220 Sox18P43680 377 aa9.97□□□□□ -0.81
Msh3-201ENSMUST00000022220 Fgf9P54130 208 aa9.97□□□□□ -0.81
Msh3-201ENSMUST00000022220 Polr1dP97304 133 aa9.97□□□□□ -0.81
Msh3-201ENSMUST00000022220 FuzQ3UYI6 415 aa9.97□□□□□ -0.81
Msh3-201ENSMUST00000022220 Slc35g3Q5F297 340 aa9.97□□□□□ -0.81
Msh3-201ENSMUST00000022220 XkrxQ5GH68 449 aa9.97□□□□□ -0.81
Msh3-201ENSMUST00000022220 Trav8d-2Q5R1B6 112 aa9.97□□□□□ -0.81
Msh3-201ENSMUST00000022220 Galk2Q68FH4 458 aa9.97□□□□□ -0.81
Msh3-201ENSMUST00000022220 Olfr1031Q7TR87 336 aa9.97□□□□□ -0.81
Msh3-201ENSMUST00000022220 Olfr774Q7TRI5 312 aa9.97□□□□□ -0.81
Msh3-201ENSMUST00000022220 Cdk5rap1Q8BTW8 588 aa9.97□□□□□ -0.81
Msh3-201ENSMUST00000022220 Plekha1Q8BUL6 383 aa9.97□□□□□ -0.81
Msh3-201ENSMUST00000022220 Slc35f4Q8BZK4 485 aa9.97□□□□□ -0.81
Msh3-201ENSMUST00000022220 Mrps23Q8VE22 177 aaKnown RBP9.97□□□□□ -0.81
Msh3-201ENSMUST00000022220 Olfr518Q8VEW1 333 aa9.97□□□□□ -0.81
Msh3-201ENSMUST00000022220 Olfr229Q8VFN5 307 aa9.97□□□□□ -0.81
Msh3-201ENSMUST00000022220 Asb16Q8VHS5 453 aa9.97□□□□□ -0.81
Msh3-201ENSMUST00000022220 Efcab11Q9D0E5 162 aa9.97□□□□□ -0.81
Msh3-201ENSMUST00000022220 Cyp11a1Q9QZ82 526 aa9.97□□□□□ -0.81
Msh3-201ENSMUST00000022220 Sema6cQ9WTM3 931 aa9.97□□□□□ -0.81
Msh3-201ENSMUST00000022220 Padi1Q9Z185 662 aa9.97□□□□□ -0.81
Msh3-201ENSMUST00000022220 AtrxQ61687 2476 aaKnown RBP9.97□□□□□ -0.81
Msh3-201ENSMUST00000022220 Iglc4A0A0G2JEK5 104 aa9.97□□□□□ -0.81
Msh3-201ENSMUST00000022220 Ajap1A2ALI5 412 aa9.97□□□□□ -0.81
Msh3-201ENSMUST00000022220 Olfr610E9Q598 315 aa9.97□□□□□ -0.81
Msh3-201ENSMUST00000022220 Gm20683H3BKJ1 410 aa9.97□□□□□ -0.81
Msh3-201ENSMUST00000022220 FaimlJ3QPY3 178 aa9.97□□□□□ -0.81
Msh3-201ENSMUST00000022220 Il1bP10749 269 aa9.97□□□□□ -0.81
Msh3-201ENSMUST00000022220 Msx1P13297 303 aa9.97□□□□□ -0.81
Msh3-201ENSMUST00000022220 Fv1P70213 459 aa9.97□□□□□ -0.81
Msh3-201ENSMUST00000022220 Rhox4fQ2MDF8 205 aa9.97□□□□□ -0.81
Msh3-201ENSMUST00000022220 Rhox4cQ2MDG1 205 aa9.97□□□□□ -0.81
Msh3-201ENSMUST00000022220 Slc35a1Q61420 336 aa9.97□□□□□ -0.81
Msh3-201ENSMUST00000022220 MffQ6PCP5 291 aa9.97□□□□□ -0.81
Msh3-201ENSMUST00000022220 Olfr1349Q7TQV1 317 aa9.97□□□□□ -0.81
Msh3-201ENSMUST00000022220 Olfr1344Q7TQV3 321 aa9.97□□□□□ -0.81
Msh3-201ENSMUST00000022220 Olfr304Q7TS03 333 aa9.97□□□□□ -0.81
Msh3-201ENSMUST00000022220 Serpinb1bQ8VHP7 382 aa9.97□□□□□ -0.81
Msh3-201ENSMUST00000022220 Slc39a8Q91W10 462 aa9.97□□□□□ -0.81
Msh3-201ENSMUST00000022220 Sfxn5Q925N0 342 aa9.97□□□□□ -0.81
Msh3-201ENSMUST00000022220 Acy1Q99JW2 408 aa9.97□□□□□ -0.81
Msh3-201ENSMUST00000022220 Gorasp2Q99JX3 451 aa9.97□□□□□ -0.81
Msh3-201ENSMUST00000022220 Arpc5Q9CPW4 151 aa9.97□□□□□ -0.81
Msh3-201ENSMUST00000022220 9230112D13RikQ9D260 137 aa9.97□□□□□ -0.81
Msh3-201ENSMUST00000022220 Rhox4aQ9D3I8 205 aa9.97□□□□□ -0.81
Msh3-201ENSMUST00000022220 Lpcat2bQ9D5U0 516 aa9.97□□□□□ -0.81
Msh3-201ENSMUST00000022220 Pfn4Q9D6I3 129 aa9.97□□□□□ -0.81
Msh3-201ENSMUST00000022220 Elp4Q9ER73 422 aa9.97□□□□□ -0.81
Retrieved 100 of 22,080 RNA–protein pairs in 34.8 ms