RNA–Protein interactions for RNA: tP(UGG)A

TRN1, Transcript of Proline tRNA (tRNA-Pro), predicted by tRNAscan-SE analysis, yeastyeast

Gene TRN1, Length 72 nt, Biotype tRNA.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
TRN1tP(UGG)A TRZ1P36159 838 aaPredicted RBP16.77■□□□□ 0.28
TRN1tP(UGG)A TBS1P38114 1094 aa16.77■□□□□ 0.28
TRN1tP(UGG)A MSC7P38694 644 aa16.77■□□□□ 0.28
TRN1tP(UGG)A SAH1P39954 449 aaKnown RBP16.77■□□□□ 0.28
TRN1tP(UGG)A UTP5Q04177 643 aaKnown RBP16.77■□□□□ 0.28
TRN1tP(UGG)A OPY2Q06810 360 aa16.77■□□□□ 0.28
TRN1tP(UGG)A ESC8Q08119 714 aa16.77■□□□□ 0.28
TRN1tP(UGG)A YLR422WQ06409 1932 aa16.76■□□□□ 0.27
TRN1tP(UGG)A TRP2P00899 507 aaKnown RBP16.76■□□□□ 0.27
TRN1tP(UGG)A ADK2P26364 225 aa16.76■□□□□ 0.27
TRN1tP(UGG)A CYS3P31373 394 aaKnown RBP16.76■□□□□ 0.27
TRN1tP(UGG)A CSG2P35206 410 aa16.76■□□□□ 0.27
TRN1tP(UGG)A XDJ1P39102 459 aa16.76■□□□□ 0.27
TRN1tP(UGG)A RSC8P43609 557 aaKnown RBP16.76■□□□□ 0.27
TRN1tP(UGG)A VPS70P47161 811 aa16.76■□□□□ 0.27
TRN1tP(UGG)A DRN1P53255 507 aaKnown RBP16.76■□□□□ 0.27
TRN1tP(UGG)A PKH2Q12236 1081 aaKnown RBP16.76■□□□□ 0.27
TRN1tP(UGG)A SPT2P06843 333 aaPredicted RBP16.75■□□□□ 0.27
TRN1tP(UGG)A HXT8P40886 569 aa16.75■□□□□ 0.27
TRN1tP(UGG)A TSR1Q07381 788 aaKnown RBP16.75■□□□□ 0.27
TRN1tP(UGG)A YPR027CQ12079 277 aa16.75■□□□□ 0.27
TRN1tP(UGG)A REC8Q12188 680 aa16.75■□□□□ 0.27
TRN1tP(UGG)A RNR1P21524 888 aaKnown RBP16.74■□□□□ 0.27
TRN1tP(UGG)A EFB1P32471 206 aaKnown RBP16.74■□□□□ 0.27
TRN1tP(UGG)A MRPL7P36519 292 aa16.74■□□□□ 0.27
TRN1tP(UGG)A AGP2P38090 596 aa16.74■□□□□ 0.27
TRN1tP(UGG)A APN2P38207 520 aa16.74■□□□□ 0.27
TRN1tP(UGG)A BUD16P39988 312 aa16.74■□□□□ 0.27
TRN1tP(UGG)A NOP13P53883 403 aaKnown RBP RIP-Chip data16.74■□□□□ 0.27not detected
TRN1tP(UGG)A VPS3P23643 1011 aa16.73■□□□□ 0.27
TRN1tP(UGG)A SCJ1P25303 377 aa16.73■□□□□ 0.27
TRN1tP(UGG)A CCL1P37366 393 aa16.73■□□□□ 0.27
TRN1tP(UGG)A EXO5P38289 585 aa16.73■□□□□ 0.27
TRN1tP(UGG)A DYS1P38791 387 aa16.73■□□□□ 0.27
TRN1tP(UGG)A YHR202WP38887 602 aa16.73■□□□□ 0.27
TRN1tP(UGG)A ZAP1P47043 880 aa16.73■□□□□ 0.27
TRN1tP(UGG)A SPC98P53540 846 aa16.73■□□□□ 0.27
TRN1tP(UGG)A CTR9P89105 1077 aa16.73■□□□□ 0.27
TRN1tP(UGG)A AHC1Q12433 566 aa16.73■□□□□ 0.27
TRN1tP(UGG)A SNF1P06782 633 aaKnown RBP16.72■□□□□ 0.27
TRN1tP(UGG)A BIO2P32451 375 aa16.72■□□□□ 0.27
TRN1tP(UGG)A ALF1P53904 254 aa16.72■□□□□ 0.27
TRN1tP(UGG)A STP1Q00947 519 aa16.72■□□□□ 0.27
TRN1tP(UGG)A SDH5Q08230 162 aa16.72■□□□□ 0.27
TRN1tP(UGG)A CHS1P08004 1131 aa16.71■□□□□ 0.27
TRN1tP(UGG)A YMR124WP39523 943 aaKnown RBP16.71■□□□□ 0.27
TRN1tP(UGG)A SPP1Q03012 353 aa16.71■□□□□ 0.27
TRN1tP(UGG)A TIF35Q04067 274 aaKnown RBP16.71■□□□□ 0.27
TRN1tP(UGG)A EMI2Q04409 500 aaKnown RBP16.71■□□□□ 0.27
TRN1tP(UGG)A YJR054WP47114 497 aa16.7■□□□□ 0.26
TRN1tP(UGG)A MCM6P53091 1017 aaKnown RBP16.7■□□□□ 0.26
TRN1tP(UGG)A PRC1P00729 532 aa16.69■□□□□ 0.26
TRN1tP(UGG)A GAL80P04387 435 aa16.69■□□□□ 0.26
TRN1tP(UGG)A HAP2P06774 265 aa16.69■□□□□ 0.26
TRN1tP(UGG)A SEC23P15303 768 aaKnown RBP16.69■□□□□ 0.26
TRN1tP(UGG)A YKL050CP35736 922 aa16.69■□□□□ 0.26
TRN1tP(UGG)A GEM1P39722 662 aa16.69■□□□□ 0.26
TRN1tP(UGG)A SEC9P40357 651 aa16.69■□□□□ 0.26
TRN1tP(UGG)A PNG1Q02890 363 aa16.69■□□□□ 0.26
TRN1tP(UGG)A EAR1Q03212 550 aa16.69■□□□□ 0.26
TRN1tP(UGG)A RAD57P25301 460 aa16.68■□□□□ 0.26
TRN1tP(UGG)A RPS3P05750 240 aaKnown RBP16.67■□□□□ 0.26
TRN1tP(UGG)A SEC21P32074 935 aaKnown RBP16.67■□□□□ 0.26
TRN1tP(UGG)A SIP5P40210 489 aaKnown RBP16.67■□□□□ 0.26
TRN1tP(UGG)A YTA12P40341 825 aa16.67■□□□□ 0.26
TRN1tP(UGG)A PHO86P46956 311 aa16.67■□□□□ 0.26
TRN1tP(UGG)A POL31P46957 487 aa16.67■□□□□ 0.26
TRN1tP(UGG)A JSN1P47135 1091 aaKnown RBP RIP-Chip data16.67■□□□□ 0.26not detected
TRN1tP(UGG)A MZM1Q03429 123 aaPredicted RBP16.67■□□□□ 0.26
TRN1tP(UGG)A YER152CP10356 443 aa16.66■□□□□ 0.26
TRN1tP(UGG)A RRN6P32786 894 aa16.66■□□□□ 0.26
TRN1tP(UGG)A STO1P34160 861 aaKnown RBP16.66■□□□□ 0.26
TRN1tP(UGG)A SET5P38890 526 aaKnown RBP16.66■□□□□ 0.26
TRN1tP(UGG)A YEL023CP39992 682 aa16.66■□□□□ 0.26
TRN1tP(UGG)A MET13P53128 600 aa16.66■□□□□ 0.26
TRN1tP(UGG)A YGL036WP53185 909 aaPredicted RBP16.66■□□□□ 0.26
TRN1tP(UGG)A MUB1Q03162 620 aa16.66■□□□□ 0.26
TRN1tP(UGG)A SOV1Q04748 898 aa16.66■□□□□ 0.26
TRN1tP(UGG)A YLR001CQ07895 862 aa16.66■□□□□ 0.26
TRN1tP(UGG)A VMA4P22203 233 aaKnown RBP16.65■□□□□ 0.26
TRN1tP(UGG)A SAT4P25333 603 aaKnown RBP16.65■□□□□ 0.26
TRN1tP(UGG)A VBA3P25594 458 aa16.65■□□□□ 0.26
TRN1tP(UGG)A GYP6P32806 458 aa16.65■□□□□ 0.26
TRN1tP(UGG)A VBA5P36172 582 aa16.65■□□□□ 0.26
TRN1tP(UGG)A CBR1P38626 284 aaKnown RBP16.65■□□□□ 0.26
TRN1tP(UGG)A CCC2P38995 1004 aa16.65■□□□□ 0.26
TRN1tP(UGG)A YFL052WP43551 465 aa16.65■□□□□ 0.26
TRN1tP(UGG)A YGR021WP53212 290 aa16.65■□□□□ 0.26
TRN1tP(UGG)A GPD1Q00055 391 aaKnown RBP16.65■□□□□ 0.26
TRN1tP(UGG)A GCS1P35197 352 aa16.64■□□□□ 0.25
TRN1tP(UGG)A CAJ1P39101 391 aa16.64■□□□□ 0.25
TRN1tP(UGG)A FMP10P40098 244 aa16.64■□□□□ 0.25
TRN1tP(UGG)A EFM4P40516 257 aa16.64■□□□□ 0.25
TRN1tP(UGG)A APT1P49435 187 aaKnown RBP16.64■□□□□ 0.25
TRN1tP(UGG)A DAS2Q12084 232 aa16.64■□□□□ 0.25
TRN1tP(UGG)A TPK1P06244 397 aa16.63■□□□□ 0.25
TRN1tP(UGG)A PET123P17558 318 aa16.63■□□□□ 0.25
TRN1tP(UGG)A GAC1P28006 793 aa16.63■□□□□ 0.25
TRN1tP(UGG)A FRE1P32791 686 aa16.63■□□□□ 0.25
TRN1tP(UGG)A KDX1P36005 433 aa16.63■□□□□ 0.25
Retrieved 100 of 5,963 RNA–protein pairs in 23.6 ms