RNA–Protein interactions for RNA: snR49

snR49, Transcript of H/ACA box small nucleolar RNA (snoRNA), yeast

Gene snR49, Length 165 nt, Biotype snoRNA.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
snR49	snR49	UBX5	Q06682	500 aa		2.68	□□□□□ -1.98
snR49	snR49	FMP25	Q08023	583 aa		2.68	□□□□□ -1.98
snR49	snR49	MLH3	Q12083	715 aa		2.68	□□□□□ -1.98
snR49	snR49	ERG11	P10614	530 aa		2.67	□□□□□ -1.98
snR49	snR49	NAP1	P25293	417 aa	Known RBP	2.67	□□□□□ -1.98
snR49	snR49	MVD1	P32377	396 aa	Known RBP	2.67	□□□□□ -1.98
snR49	snR49	SPC29	P33419	253 aa		2.67	□□□□□ -1.98
snR49	snR49	EMC3	P36039	253 aa		2.67	□□□□□ -1.98
snR49	snR49	SAP190	P36123	1033 aa		2.67	□□□□□ -1.98
snR49	snR49	FMO1	P38866	432 aa		2.67	□□□□□ -1.98
snR49	snR49	LYS9	P38999	446 aa		2.67	□□□□□ -1.98
snR49	snR49	LTP1	P40347	161 aa		2.67	□□□□□ -1.98
snR49	snR49	MTR3	P48240	250 aa	Predicted RBP	2.67	□□□□□ -1.98
snR49	snR49	JIP5	Q06214	492 aa	Predicted RBP	2.67	□□□□□ -1.98
snR49	snR49	PHO11	P35842	467 aa		2.66	□□□□□ -1.98
snR49	snR49	PHO12	P38693	467 aa		2.66	□□□□□ -1.98
snR49	snR49	SET5	P38890	526 aa	Known RBP	2.66	□□□□□ -1.98
snR49	snR49	ECM1	P39715	212 aa		2.66	□□□□□ -1.98
snR49	snR49	XBP1	P40489	647 aa		2.66	□□□□□ -1.98
snR49	snR49	GYP8	P43570	497 aa		2.66	□□□□□ -1.98
snR49	snR49	YGR283C	P53336	341 aa	Predicted RBP	2.66	□□□□□ -1.98
snR49	snR49	MPS1	P54199	764 aa		2.66	□□□□□ -1.98
snR49	snR49	RGC1	Q06108	1083 aa	Known RBP	2.66	□□□□□ -1.98
snR49	snR49	SLK19	Q08581	821 aa	Known RBP	2.66	□□□□□ -1.98
snR49	snR49	CIR2	Q08822	631 aa		2.66	□□□□□ -1.98
snR49	snR49	YBR182C-A	Q8TGU6	64 aa		2.66	□□□□□ -1.98
snR49	snR49	PGK1	P00560	416 aa	Known RBP	2.65	□□□□□ -1.99
snR49	snR49	CCR4	P31384	837 aa	Known RBP	2.65	□□□□□ -1.99
snR49	snR49	YHR112C	P38716	378 aa		2.65	□□□□□ -1.99
snR49	snR49	MUP3	P38734	546 aa		2.65	□□□□□ -1.99
snR49	snR49	NUP60	P39705	539 aa		2.65	□□□□□ -1.99
snR49	snR49	VAC8	P39968	578 aa		2.65	□□□□□ -1.99
snR49	snR49	STB2	P46679	850 aa		2.65	□□□□□ -1.99
snR49	snR49	TDA9	Q04545	1251 aa		2.65	□□□□□ -1.99
snR49	snR49	YLR149C	Q99296	730 aa		2.65	□□□□□ -1.99
snR49	snR49	RPL8B	P29453	256 aa	Known RBP	2.64	□□□□□ -1.99
snR49	snR49	SCT1	P32784	759 aa		2.64	□□□□□ -1.99
snR49	snR49	ZIP2	P53061	704 aa		2.64	□□□□□ -1.99
snR49	snR49	CTK1	Q03957	528 aa	Known RBP	2.64	□□□□□ -1.99
snR49	snR49	EAF1	Q06337	982 aa		2.64	□□□□□ -1.99
snR49	snR49	THR1	P17423	357 aa	Known RBP	2.63	□□□□□ -1.99
snR49	snR49	NUP1	P20676	1076 aa		2.63	□□□□□ -1.99
snR49	snR49	ADE2	P21264	571 aa	Known RBP	2.63	□□□□□ -1.99
snR49	snR49	ERG6	P25087	383 aa	Known RBP	2.63	□□□□□ -1.99
snR49	snR49	FUB1	P25659	250 aa		2.63	□□□□□ -1.99
snR49	snR49	RGT1	P32862	1170 aa		2.63	□□□□□ -1.99
snR49	snR49	UBP6	P43593	499 aa	Known RBP	2.63	□□□□□ -1.99
snR49	snR49	HXT16	P47185	567 aa		2.63	□□□□□ -1.99
snR49	snR49	PRP31	P49704	494 aa	Predicted RBP	2.63	□□□□□ -1.99
snR49	snR49	ALD6	P54115	500 aa	Known RBP	2.63	□□□□□ -1.99
snR49	snR49	RPA135	P22138	1203 aa	Known RBP	2.62	□□□□□ -1.99
snR49	snR49	SET3	P36124	751 aa		2.62	□□□□□ -1.99
snR49	snR49	GMH1	P36125	273 aa		2.62	□□□□□ -1.99
snR49	snR49	RLP7	P40693	322 aa	Known RBP	2.62	□□□□□ -1.99
snR49	snR49	SHR5	P41912	237 aa		2.62	□□□□□ -1.99
snR49	snR49	YBP2	P53169	641 aa		2.62	□□□□□ -1.99
snR49	snR49	FMP30	Q02883	468 aa		2.62	□□□□□ -1.99
snR49	snR49	SVF1	Q05515	481 aa		2.62	□□□□□ -1.99
snR49	snR49	REH1	Q06709	432 aa		2.62	□□□□□ -1.99
snR49	snR49	USV1	Q12132	391 aa		2.62	□□□□□ -1.99
snR49	snR49	ZRT2	Q12436	422 aa		2.62	□□□□□ -1.99
snR49	snR49	HRP1	Q99383	534 aa	Known RBP	2.62	□□□□□ -1.99
snR49	snR49	APL2	P36000	726 aa	Predicted RBP	2.61	□□□□□ -1.99
snR49	snR49	TRZ1	P36159	838 aa	Predicted RBP	2.61	□□□□□ -1.99
snR49	snR49	MEP2	P41948	499 aa		2.61	□□□□□ -1.99
snR49	snR49	ZDS1	P50111	915 aa	Known RBP	2.61	□□□□□ -1.99
snR49	snR49	ERP6	P53198	216 aa		2.61	□□□□□ -1.99
snR49	snR49	ARG5,6	Q01217	863 aa		2.61	□□□□□ -1.99
snR49	snR49	YDR514C	Q04408	483 aa		2.61	□□□□□ -1.99
snR49	snR49	GEP3	Q08622	556 aa		2.61	□□□□□ -1.99
snR49	snR49	DIF1	O13577	133 aa		2.6	□□□□□ -1.99
snR49	snR49	STE12	P13574	688 aa		2.6	□□□□□ -1.99
snR49	snR49	APN1	P22936	367 aa		2.6	□□□□□ -1.99
snR49	snR49	GRX1	P25373	110 aa	Known RBP	2.6	□□□□□ -1.99
snR49	snR49	ARE1	P25628	610 aa		2.6	□□□□□ -1.99
snR49	snR49	SPO75	Q07798	868 aa		2.6	□□□□□ -1.99
snR49	snR49	ADE5,7	P07244	802 aa	Known RBP	2.59	□□□□□ -1.99
snR49	snR49	SAT4	P25333	603 aa	Known RBP	2.59	□□□□□ -1.99
snR49	snR49	KCC4	P25389	1037 aa		2.59	□□□□□ -1.99
snR49	snR49	YMC1	P32331	307 aa		2.59	□□□□□ -1.99
snR49	snR49	YMC2	P38087	329 aa		2.59	□□□□□ -1.99
snR49	snR49	MIT1	P40002	666 aa		2.59	□□□□□ -1.99
snR49	snR49	TY4A-J	P47023	414 aa		2.59	□□□□□ -1.99
snR49	snR49	MET7	Q08645	548 aa		2.59	□□□□□ -1.99
snR49	snR49	PHO5	P00635	467 aa		2.58	□□□□□ -2
snR49	snR49	MBR1	P23493	339 aa		2.58	□□□□□ -2
snR49	snR49	CRP1	P38845	465 aa	Known RBP	2.58	□□□□□ -2
snR49	snR49	PMC1	P38929	1173 aa	Predicted RBP	2.58	□□□□□ -2
snR49	snR49	RSP5	P39940	809 aa	Known RBP	2.58	□□□□□ -2
snR49	snR49	GET2	P40056	285 aa		2.58	□□□□□ -2
snR49	snR49	TAX4	P47030	604 aa		2.58	□□□□□ -2
snR49	snR49	YPL068C	Q02749	293 aa		2.58	□□□□□ -2
snR49	snR49	ATP25	Q03153	612 aa		2.58	□□□□□ -2
snR49	snR49	HFD1	Q04458	532 aa		2.58	□□□□□ -2
snR49	snR49	YDR338C	Q05497	695 aa		2.58	□□□□□ -2
snR49	snR49	MCM21	Q06675	368 aa		2.58	□□□□□ -2
snR49	snR49	PER1	P25625	357 aa		2.57	□□□□□ -2
snR49	snR49	UGP1	P32861	499 aa	Known RBP	2.57	□□□□□ -2
snR49	snR49	ALG2	P43636	503 aa		2.57	□□□□□ -2
snR49	snR49	YGR151C	P53287	111 aa		2.57	□□□□□ -2

Retrieved 100 of 5,963 RNA–protein pairs in 44.4 ms