RNA–Protein interactions for RNA: YPR049C

ATG11, Transcript of Adapter protein for pexophagy and the Cvt targeting pathway, yeastyeast

Gene ATG11, Length 3,537 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
ATG11YPR049C ATG11Q12527 1178 aa2.59□□□□□ -2
ATG11YPR049C PEX2P32800 271 aa2.58□□□□□ -2
ATG11YPR049C YRO2P38079 344 aa2.58□□□□□ -2
ATG11YPR049C FAA3P39002 694 aa2.58□□□□□ -2
ATG11YPR049C YIR042CP40586 236 aa2.58□□□□□ -2
ATG11YPR049C FAA4P47912 694 aaKnown RBP2.58□□□□□ -2
ATG11YPR049C SLD5Q03406 294 aa2.58□□□□□ -2
ATG11YPR049C YML053CQ04978 212 aa2.58□□□□□ -2
ATG11YPR049C MRN1Q08925 612 aaKnown RBP RIP-Chip data2.58□□□□□ -2not detected
ATG11YPR049C MDN1Q12019 4910 aaKnown RBP2.58□□□□□ -2
ATG11YPR049C SMY2P32909 740 aaKnown RBP2.58□□□□□ -2
ATG11YPR049C PSP2P50109 593 aaKnown RBP2.58□□□□□ -2
ATG11YPR049C TNA1P53322 534 aa2.58□□□□□ -2
ATG11YPR049C LEE1Q02799 301 aaKnown RBP2.58□□□□□ -2
ATG11YPR049C VPS72Q03388 795 aa2.58□□□□□ -2
ATG11YPR049C NSE1Q07913 336 aa2.58□□□□□ -2
ATG11YPR049C FLC1Q08967 793 aa2.58□□□□□ -2
ATG11YPR049C AIM44Q99299 758 aa2.58□□□□□ -2
ATG11YPR049C FLP1P03870 423 aa2.58□□□□□ -2
ATG11YPR049C INO1P11986 533 aa2.58□□□□□ -2
ATG11YPR049C PUP3P25451 205 aaKnown RBP2.58□□□□□ -2
ATG11YPR049C MSS51P32335 436 aa2.58□□□□□ -2
ATG11YPR049C GTF1P53260 183 aaPredicted RBP2.58□□□□□ -2
ATG11YPR049C PNG1Q02890 363 aa2.58□□□□□ -2
ATG11YPR049C HAS1Q03532 505 aaKnown RBP2.58□□□□□ -2
ATG11YPR049C RPN7Q06103 429 aaKnown RBP2.58□□□□□ -2
ATG11YPR049C ECM32P32644 1121 aaKnown RBP2.57□□□□□ -2
ATG11YPR049C OSH3P38713 996 aaKnown RBP2.57□□□□□ -2
ATG11YPR049C YNL193WP53870 558 aa2.57□□□□□ -2
ATG11YPR049C MYO5Q04439 1219 aaKnown RBP2.57□□□□□ -2
ATG11YPR049C TOR1P35169 2470 aa2.57□□□□□ -2
ATG11YPR049C TRP2P00899 507 aaKnown RBP2.57□□□□□ -2
ATG11YPR049C MAS2P11914 482 aa2.57□□□□□ -2
ATG11YPR049C HOM2P13663 365 aaKnown RBP2.57□□□□□ -2
ATG11YPR049C UTH1P36135 365 aa2.57□□□□□ -2
ATG11YPR049C PPX1P38698 397 aa2.57□□□□□ -2
ATG11YPR049C SHR5P41912 237 aa2.57□□□□□ -2
ATG11YPR049C GLO4Q12320 285 aa2.57□□□□□ -2
ATG11YPR049C MEX67Q99257 599 aaKnown RBP2.57□□□□□ -2
ATG11YPR049C MPD2Q99316 277 aa2.57□□□□□ -2
ATG11YPR049C TOM70P07213 617 aaKnown RBP2.56□□□□□ -2
ATG11YPR049C SPS1P08458 490 aa2.56□□□□□ -2
ATG11YPR049C NUC1P08466 329 aa2.56□□□□□ -2
ATG11YPR049C SAM1P10659 382 aaKnown RBP2.56□□□□□ -2
ATG11YPR049C HMG2P12684 1045 aa2.56□□□□□ -2
ATG11YPR049C MDL2P33311 773 aa2.56□□□□□ -2
ATG11YPR049C CCC2P38995 1004 aa2.56□□□□□ -2
ATG11YPR049C HMF1P40037 129 aaKnown RBP2.56□□□□□ -2
ATG11YPR049C SPT20P50875 604 aa2.56□□□□□ -2
ATG11YPR049C LCD1Q04377 747 aa2.56□□□□□ -2
ATG11YPR049C YHL026CP38740 315 aa2.56□□□□□ -2
ATG11YPR049C ZAP1P47043 880 aa2.56□□□□□ -2
ATG11YPR049C NUT1P53114 1132 aa2.56□□□□□ -2
ATG11YPR049C BIO5P53744 561 aaKnown RBP2.56□□□□□ -2
ATG11YPR049C SPO75Q07798 868 aa2.56□□□□□ -2
ATG11YPR049C YPL260WQ08977 551 aa2.56□□□□□ -2
ATG11YPR049C TMA46Q12000 345 aaKnown RBP2.56□□□□□ -2
ATG11YPR049C OSW2Q12202 724 aa2.56□□□□□ -2
ATG11YPR049C UBC1P21734 215 aaKnown RBP2.56□□□□□ -2
ATG11YPR049C EFT1P32324 842 aaKnown RBP2.56□□□□□ -2
ATG11YPR049C SHP1P34223 423 aa2.56□□□□□ -2
ATG11YPR049C NNK1P36003 928 aa2.56□□□□□ -2
ATG11YPR049C REG2P38232 338 aa2.56□□□□□ -2
ATG11YPR049C SLS1P42900 643 aa2.56□□□□□ -2
ATG11YPR049C RGD2P43556 714 aa2.56□□□□□ -2
ATG11YPR049C NAB6Q03735 1134 aaKnown RBP RIP-Chip data2.56□□□□□ -2not detected
ATG11YPR049C ERS1P17261 260 aa2.55□□□□□ -2
ATG11YPR049C FPR1P20081 114 aaKnown RBP2.55□□□□□ -2
ATG11YPR049C MLS1P30952 554 aa2.55□□□□□ -2
ATG11YPR049C CDC11P32458 415 aa2.55□□□□□ -2
ATG11YPR049C DOT6P40059 670 aaKnown RBP2.55□□□□□ -2
ATG11YPR049C FYV10P40492 516 aa2.55□□□□□ -2
ATG11YPR049C DSE3Q08729 430 aa2.55□□□□□ -2
ATG11YPR049C MRP10O75012 95 aa2.55□□□□□ -2
ATG11YPR049C RPS31P05759 152 aaKnown RBP2.55□□□□□ -2
ATG11YPR049C CMP2P14747 604 aa2.55□□□□□ -2
ATG11YPR049C OPI1P21957 404 aa2.55□□□□□ -2
ATG11YPR049C NEM1P38757 446 aa2.55□□□□□ -2
ATG11YPR049C SRP1Q02821 542 aaKnown RBP2.55□□□□□ -2
ATG11YPR049C PUF3Q07807 879 aaKnown RBP RIP-Chip data2.55□□□□□ -2not detected
ATG11YPR049C TAH18Q12181 623 aa2.55□□□□□ -2
ATG11YPR049C ATP1P07251 545 aaKnown RBP2.55□□□□□ -2
ATG11YPR049C NPR1P22211 790 aa2.55□□□□□ -2
ATG11YPR049C TVP38P36164 337 aa2.55□□□□□ -2
ATG11YPR049C APN2P38207 520 aa2.55□□□□□ -2
ATG11YPR049C DAK2P43550 591 aa2.55□□□□□ -2
ATG11YPR049C LIF1P53150 421 aa2.55□□□□□ -2
ATG11YPR049C SLP1Q12232 587 aa2.55□□□□□ -2
ATG11YPR049C ADD66P36040 267 aa2.54□□□□□ -2
ATG11YPR049C CTR1P49573 406 aa2.54□□□□□ -2
ATG11YPR049C HNT2P49775 206 aa2.54□□□□□ -2
ATG11YPR049C YGR045CP53229 120 aa2.54□□□□□ -2
ATG11YPR049C YGR122WP53272 402 aa2.54□□□□□ -2
ATG11YPR049C ROD1Q02805 837 aa2.54□□□□□ -2
ATG11YPR049C MUK1Q02866 612 aa2.54□□□□□ -2
ATG11YPR049C MAG2Q06436 670 aaKnown RBP2.54□□□□□ -2
ATG11YPR049C SOG2Q08817 791 aa2.54□□□□□ -2
ATG11YPR049C PCD1Q12524 340 aa2.54□□□□□ -2
ATG11YPR049C TAO3P40468 2376 aa2.54□□□□□ -2
ATG11YPR049C ALT1P52893 592 aa2.54□□□□□ -2
Retrieved 100 of 5,963 RNA–protein pairs in 31.9 ms