RNA–Protein interactions for RNA: YOL116W

MSN1, Transcript of Transcriptional activator, yeast

Gene MSN1, Length 1,149 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
MSN1	YOL116W	TAD1	P53065	400 aa		4.25	□□□□□ -1.73
MSN1	YOL116W	DUS1	P53759	423 aa	Known RBP	4.25	□□□□□ -1.73
MSN1	YOL116W	CTF4	Q01454	927 aa		4.25	□□□□□ -1.73
MSN1	YOL116W	ATP25	Q03153	612 aa		4.25	□□□□□ -1.73
MSN1	YOL116W	RSC3	Q06639	885 aa		4.25	□□□□□ -1.73
MSN1	YOL116W	YSP2	Q06681	1438 aa		4.24	□□□□□ -1.73
MSN1	YOL116W	RAD53	P22216	821 aa		4.24	□□□□□ -1.73
MSN1	YOL116W	SET5	P38890	526 aa	Known RBP	4.24	□□□□□ -1.73
MSN1	YOL116W	SHR5	P41912	237 aa		4.24	□□□□□ -1.73
MSN1	YOL116W	PKH1	Q03407	766 aa		4.24	□□□□□ -1.73
MSN1	YOL116W	MET7	Q08645	548 aa		4.24	□□□□□ -1.73
MSN1	YOL116W	HAL9	Q12180	1030 aa		4.24	□□□□□ -1.73
MSN1	YOL116W	YOR022C	Q12204	715 aa		4.24	□□□□□ -1.73
MSN1	YOL116W	BNR1	P40450	1375 aa		4.24	□□□□□ -1.73
MSN1	YOL116W	ARO1	P08566	1588 aa	Known RBP	4.23	□□□□□ -1.73
MSN1	YOL116W	MET3	P08536	511 aa		4.23	□□□□□ -1.73
MSN1	YOL116W	ERG4	P25340	473 aa		4.23	□□□□□ -1.73
MSN1	YOL116W	SPC29	P33419	253 aa		4.23	□□□□□ -1.73
MSN1	YOL116W	CTF13	P35203	478 aa		4.23	□□□□□ -1.73
MSN1	YOL116W	GDH3	P39708	457 aa		4.23	□□□□□ -1.73
MSN1	YOL116W	HSV2	P50079	448 aa	Predicted RBP	4.23	□□□□□ -1.73
MSN1	YOL116W	KIN4	Q01919	800 aa		4.23	□□□□□ -1.73
MSN1	YOL116W	LAS17	Q12446	633 aa		4.23	□□□□□ -1.73
MSN1	YOL116W	DNF3	Q12674	1656 aa		4.22	□□□□□ -1.73
MSN1	YOL116W	DIF1	O13577	133 aa		4.22	□□□□□ -1.73
MSN1	YOL116W	SUL1	P38359	859 aa		4.22	□□□□□ -1.73
MSN1	YOL116W	RPP1	P38786	293 aa		4.22	□□□□□ -1.73
MSN1	YOL116W	VHR1	P40522	640 aa		4.22	□□□□□ -1.73
MSN1	YOL116W	RLP7	P40693	322 aa	Known RBP	4.22	□□□□□ -1.73
MSN1	YOL116W	SSY5	P47002	699 aa		4.22	□□□□□ -1.73
MSN1	YOL116W	RNT1	Q02555	471 aa		4.22	□□□□□ -1.73
MSN1	YOL116W	LRS4	Q04087	347 aa	Known RBP	4.22	□□□□□ -1.73
MSN1	YOL116W	DLT1	Q04216	342 aa		4.22	□□□□□ -1.73
MSN1	YOL116W	YLR125W	Q12138	136 aa		4.22	□□□□□ -1.73
MSN1	YOL116W	USO1	P25386	1790 aa		4.22	□□□□□ -1.73
MSN1	YOL116W	TUB3	P09734	445 aa	Known RBP	4.21	□□□□□ -1.74
MSN1	YOL116W	YCL002C	P25565	263 aa		4.21	□□□□□ -1.74
MSN1	YOL116W	PBP2	P38151	413 aa	Known RBP RIP-Chip data	4.21	□□□□□ -1.74	not detected
MSN1	YOL116W	SAK1	P38990	1142 aa		4.21	□□□□□ -1.74
MSN1	YOL116W	ASI2	P53895	289 aa		4.21	□□□□□ -1.74
MSN1	YOL116W	SLU7	Q02775	382 aa	Known RBP	4.21	□□□□□ -1.74
MSN1	YOL116W	YOL073C	Q08232	322 aa		4.21	□□□□□ -1.74
MSN1	YOL116W	PPM2	Q08282	695 aa		4.21	□□□□□ -1.74
MSN1	YOL116W	CHC1	P22137	1653 aa	Known RBP	4.21	□□□□□ -1.74
MSN1	YOL116W	GEA1	P47102	1408 aa	Predicted RBP	4.21	□□□□□ -1.74
MSN1	YOL116W	GSY1	P23337	708 aa		4.2	□□□□□ -1.74
MSN1	YOL116W	CHS7	P38843	316 aa		4.2	□□□□□ -1.74
MSN1	YOL116W	NUP82	P40368	713 aa		4.2	□□□□□ -1.74
MSN1	YOL116W	BUD6	P41697	788 aa		4.2	□□□□□ -1.74
MSN1	YOL116W	ALY2	P47029	1046 aa		4.2	□□□□□ -1.74
MSN1	YOL116W	ORC1	P54784	914 aa	Predicted RBP	4.2	□□□□□ -1.74
MSN1	YOL116W	MUS81	Q04149	632 aa	Predicted RBP	4.2	□□□□□ -1.74
MSN1	YOL116W	YLR040C	Q07988	224 aa		4.2	□□□□□ -1.74
MSN1	YOL116W	THI21	Q08975	551 aa		4.2	□□□□□ -1.74
MSN1	YOL116W	YBR182C-A	Q8TGU6	64 aa		4.2	□□□□□ -1.74
MSN1	YOL116W	SEC7	P11075	2009 aa	Known RBP	4.19	□□□□□ -1.74
MSN1	YOL116W	ALG7	P07286	448 aa		4.19	□□□□□ -1.74
MSN1	YOL116W	ERR1	P0CX10	437 aa		4.19	□□□□□ -1.74
MSN1	YOL116W	ERR2	P0CX11	437 aa		4.19	□□□□□ -1.74
MSN1	YOL116W	PHO8	P11491	566 aa		4.19	□□□□□ -1.74
MSN1	YOL116W	CAF20	P12962	161 aa	Known RBP	4.19	□□□□□ -1.74
MSN1	YOL116W	TIM23	P32897	222 aa		4.19	□□□□□ -1.74
MSN1	YOL116W	TYS1	P36421	394 aa	Known RBP	4.19	□□□□□ -1.74
MSN1	YOL116W	RPN10	P38886	268 aa	Known RBP	4.19	□□□□□ -1.74
MSN1	YOL116W	MTR3	P48240	250 aa	Predicted RBP	4.19	□□□□□ -1.74
MSN1	YOL116W	AMA1	P50082	593 aa		4.19	□□□□□ -1.74
MSN1	YOL116W	ERG5	P54781	538 aa		4.19	□□□□□ -1.74
MSN1	YOL116W	TIM44	Q01852	431 aa		4.19	□□□□□ -1.74
MSN1	YOL116W	FPR4	Q06205	392 aa	Predicted RBP	4.19	□□□□□ -1.74
MSN1	YOL116W	BUD21	Q08492	214 aa	Predicted RBP	4.19	□□□□□ -1.74
MSN1	YOL116W	PPR1	P07272	904 aa	Predicted RBP	4.18	□□□□□ -1.74
MSN1	YOL116W	PER1	P25625	357 aa		4.18	□□□□□ -1.74
MSN1	YOL116W	STO1	P34160	861 aa	Known RBP	4.18	□□□□□ -1.74
MSN1	YOL116W	OAR1	P35731	278 aa		4.18	□□□□□ -1.74
MSN1	YOL116W	ELO3	P40319	345 aa		4.18	□□□□□ -1.74
MSN1	YOL116W	FKH2	P41813	862 aa		4.18	□□□□□ -1.74
MSN1	YOL116W	BUL1	P48524	976 aa		4.18	□□□□□ -1.74
MSN1	YOL116W	ZIP2	P53061	704 aa		4.18	□□□□□ -1.74
MSN1	YOL116W	YBP2	P53169	641 aa		4.18	□□□□□ -1.74
MSN1	YOL116W	YLR415C	O13578	112 aa		4.17	□□□□□ -1.74
MSN1	YOL116W	THI4	P32318	326 aa		4.17	□□□□□ -1.74
MSN1	YOL116W	MTC2	P34246	357 aa		4.17	□□□□□ -1.74
MSN1	YOL116W	YBR259W	P38338	688 aa		4.17	□□□□□ -1.74
MSN1	YOL116W	PFA3	P42836	336 aa		4.17	□□□□□ -1.74
MSN1	YOL116W	SLI1	P53304	468 aa		4.17	□□□□□ -1.74
MSN1	YOL116W	NRG1	Q03125	231 aa		4.17	□□□□□ -1.74
MSN1	YOL116W	CRR1	Q05790	422 aa		4.17	□□□□□ -1.74
MSN1	YOL116W	FRE5	Q08908	694 aa		4.17	□□□□□ -1.74
MSN1	YOL116W	ACF2	Q12168	779 aa		4.17	□□□□□ -1.74
MSN1	YOL116W	MDM12	Q92328	271 aa		4.17	□□□□□ -1.74
MSN1	YOL116W	TY3B-G	Q99315	1547 aa		4.16	□□□□□ -1.74
MSN1	YOL116W	CAT8	P39113	1433 aa		4.16	□□□□□ -1.74
MSN1	YOL116W	YFL052W	P43551	465 aa		4.16	□□□□□ -1.74
MSN1	YOL116W	DAS1	P47005	663 aa		4.16	□□□□□ -1.74
MSN1	YOL116W	UBA2	P52488	636 aa		4.16	□□□□□ -1.74
MSN1	YOL116W	UGO1	Q03327	502 aa		4.16	□□□□□ -1.74
MSN1	YOL116W	POB3	Q04636	552 aa	Known RBP	4.16	□□□□□ -1.74
MSN1	YOL116W	OMS1	Q06668	471 aa		4.16	□□□□□ -1.74
MSN1	YOL116W	PRP4	P20053	465 aa	Known RBP	4.15	□□□□□ -1.75
MSN1	YOL116W	MSH2	P25847	964 aa		4.15	□□□□□ -1.75

Retrieved 100 of 5,963 RNA–protein pairs in 9.3 ms