RNA–Protein interactions for RNA: YLR396C

VPS33, Transcript of ATP-binding protein that is a subunit of the HOPS and CORVET complexes, yeast

Gene VPS33, Length 2,076 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
VPS33	YLR396C	TRM11	Q12463	433 aa		4.17	□□□□□ -1.74
VPS33	YLR396C	PRP19	P32523	503 aa	Known RBP	4.16	□□□□□ -1.74
VPS33	YLR396C	CTF13	P35203	478 aa		4.16	□□□□□ -1.74
VPS33	YLR396C	MNN4	P36044	1178 aa		4.16	□□□□□ -1.74
VPS33	YLR396C	MIP6	P38760	659 aa	Known RBP	4.16	□□□□□ -1.74
VPS33	YLR396C	MPT5	P39016	859 aa	Known RBP RIP-Chip data	4.16	□□□□□ -1.74	not detected
VPS33	YLR396C	IRC24	P40580	263 aa		4.16	□□□□□ -1.74
VPS33	YLR396C	GPP1	P41277	250 aa	Known RBP	4.16	□□□□□ -1.74
VPS33	YLR396C	PCL10	P53124	433 aa		4.16	□□□□□ -1.74
VPS33	YLR396C	ARP4	P80428	489 aa		4.16	□□□□□ -1.74
VPS33	YLR396C	YLR415C	O13578	112 aa		4.15	□□□□□ -1.74
VPS33	YLR396C	CAD1	P24813	409 aa	Known RBP	4.15	□□□□□ -1.74
VPS33	YLR396C	SIC1	P38634	284 aa		4.15	□□□□□ -1.74
VPS33	YLR396C	RPP1	P38786	293 aa		4.15	□□□□□ -1.74
VPS33	YLR396C	MRPS35	P53292	345 aa		4.15	□□□□□ -1.74
VPS33	YLR396C	TRM732	Q03496	1420 aa		4.15	□□□□□ -1.74
VPS33	YLR396C	CTS1	P29029	562 aa		4.15	□□□□□ -1.75
VPS33	YLR396C	NGG1	P32494	702 aa		4.15	□□□□□ -1.75
VPS33	YLR396C	FAP7	Q12055	197 aa	Predicted RBP	4.15	□□□□□ -1.75
VPS33	YLR396C	DCS2	Q12123	353 aa		4.15	□□□□□ -1.75
VPS33	YLR396C	MON2	P48563	1636 aa	Predicted RBP	4.15	□□□□□ -1.75
VPS33	YLR396C	STH1	P32597	1359 aa		4.14	□□□□□ -1.75
VPS33	YLR396C	PMA1	P05030	918 aa	Known RBP	4.14	□□□□□ -1.75
VPS33	YLR396C	BUL1	P48524	976 aa		4.14	□□□□□ -1.75
VPS33	YLR396C	HFD1	Q04458	532 aa		4.14	□□□□□ -1.75
VPS33	YLR396C	SPP41	P38904	1435 aa		4.14	□□□□□ -1.75
VPS33	YLR396C	SSB1	P11484	613 aa	Known RBP	4.14	□□□□□ -1.75
VPS33	YLR396C	PFK1	P16861	987 aa	Known RBP	4.14	□□□□□ -1.75
VPS33	YLR396C	SSB2	P40150	613 aa	Known RBP	4.14	□□□□□ -1.75
VPS33	YLR396C	RET2	P43621	546 aa		4.14	□□□□□ -1.75
VPS33	YLR396C	ESC8	Q08119	714 aa		4.14	□□□□□ -1.75
VPS33	YLR396C	TRP4	P07285	380 aa	Predicted RBP	4.13	□□□□□ -1.75
VPS33	YLR396C	SSZ1	P38788	538 aa	Known RBP	4.13	□□□□□ -1.75
VPS33	YLR396C	CCT5	P40413	562 aa	Known RBP	4.13	□□□□□ -1.75
VPS33	YLR396C	GZF3	P42944	551 aa	Known RBP	4.13	□□□□□ -1.75
VPS33	YLR396C	TAF1	P46677	1066 aa		4.13	□□□□□ -1.75
VPS33	YLR396C	YJR039W	P47107	1121 aa		4.13	□□□□□ -1.75
VPS33	YLR396C	BRE5	P53741	515 aa	Known RBP	4.13	□□□□□ -1.75
VPS33	YLR396C	ORC4	P54791	529 aa		4.13	□□□□□ -1.75
VPS33	YLR396C	LEE1	Q02799	301 aa	Known RBP	4.13	□□□□□ -1.75
VPS33	YLR396C	YTM1	Q12024	460 aa	Predicted RBP	4.13	□□□□□ -1.75
VPS33	YLR396C	SHM2	P37291	469 aa	Known RBP	4.12	□□□□□ -1.75
VPS33	YLR396C	YBR259W	P38338	688 aa		4.12	□□□□□ -1.75
VPS33	YLR396C	TDA3	P38758	523 aa		4.12	□□□□□ -1.75
VPS33	YLR396C	OAF1	P39720	1047 aa	Predicted RBP	4.12	□□□□□ -1.75
VPS33	YLR396C	PHO23	P50947	330 aa		4.12	□□□□□ -1.75
VPS33	YLR396C	HCM1	P25364	564 aa		4.12	□□□□□ -1.75
VPS33	YLR396C	PAF1	P38351	445 aa		4.12	□□□□□ -1.75
VPS33	YLR396C	ECM1	P39715	212 aa		4.12	□□□□□ -1.75
VPS33	YLR396C	GID8	P40208	455 aa		4.12	□□□□□ -1.75
VPS33	YLR396C	YGR153W	P48238	217 aa		4.12	□□□□□ -1.75
VPS33	YLR396C	PRP31	P49704	494 aa	Predicted RBP	4.12	□□□□□ -1.75
VPS33	YLR396C	YBP2	P53169	641 aa		4.12	□□□□□ -1.75
VPS33	YLR396C	NRG1	Q03125	231 aa		4.12	□□□□□ -1.75
VPS33	YLR396C	SPT7	P35177	1332 aa		4.12	□□□□□ -1.75
VPS33	YLR396C	ADE2	P21264	571 aa	Known RBP	4.11	□□□□□ -1.75
VPS33	YLR396C	ARG5,6	Q01217	863 aa		4.11	□□□□□ -1.75
VPS33	YLR396C	ECM9	Q02202	377 aa		4.11	□□□□□ -1.75
VPS33	YLR396C	TGL5	Q12043	749 aa		4.11	□□□□□ -1.75
VPS33	YLR396C	NTO1	Q12311	748 aa		4.11	□□□□□ -1.75
VPS33	YLR396C	IKI3	Q06706	1349 aa	Known RBP	4.11	□□□□□ -1.75
VPS33	YLR396C	MAL31	P38156	614 aa		4.1	□□□□□ -1.75
VPS33	YLR396C	FKH2	P41813	862 aa		4.1	□□□□□ -1.75
VPS33	YLR396C	MNN11	P46985	422 aa	Known RBP	4.1	□□□□□ -1.75
VPS33	YLR396C	TMA17	Q12513	150 aa		4.1	□□□□□ -1.75
VPS33	YLR396C	EUG1	P32474	517 aa		4.1	□□□□□ -1.75
VPS33	YLR396C	APL2	P36000	726 aa	Predicted RBP	4.1	□□□□□ -1.75
VPS33	YLR396C	AKL1	P38080	1108 aa	Known RBP	4.1	□□□□□ -1.75
VPS33	YLR396C	HXT6	P39003	570 aa	Known RBP	4.1	□□□□□ -1.75
VPS33	YLR396C	HXT7	P39004	570 aa		4.1	□□□□□ -1.75
VPS33	YLR396C	NUG1	P40010	520 aa	Known RBP	4.1	□□□□□ -1.75
VPS33	YLR396C	DEF1	P35732	738 aa	Known RBP	4.09	□□□□□ -1.75
VPS33	YLR396C	YHR112C	P38716	378 aa		4.09	□□□□□ -1.75
VPS33	YLR396C	BEM4	P39011	633 aa		4.09	□□□□□ -1.75
VPS33	YLR396C	SET2	P46995	733 aa	Known RBP	4.09	□□□□□ -1.75
VPS33	YLR396C	TEX1	P53851	422 aa	Known RBP	4.09	□□□□□ -1.75
VPS33	YLR396C	HMO1	Q03973	246 aa	Known RBP	4.09	□□□□□ -1.75
VPS33	YLR396C	MCM21	Q06675	368 aa		4.09	□□□□□ -1.75
VPS33	YLR396C	TRM13	Q12383	476 aa		4.09	□□□□□ -1.75
VPS33	YLR396C	HSL1	P34244	1518 aa		4.09	□□□□□ -1.75
VPS33	YLR396C	GIP4	P39732	760 aa		4.09	□□□□□ -1.76
VPS33	YLR396C	YJR120W	P47157	116 aa		4.09	□□□□□ -1.76
VPS33	YLR396C	GPD1	Q00055	391 aa	Known RBP	4.09	□□□□□ -1.76
VPS33	YLR396C	RPS21B	Q3E754	87 aa	Known RBP	4.09	□□□□□ -1.76
VPS33	YLR396C	MRC1	P25588	1096 aa		4.08	□□□□□ -1.76
VPS33	YLR396C	EFT1	P32324	842 aa	Known RBP	4.08	□□□□□ -1.76
VPS33	YLR396C	PRS1	P32895	427 aa	Known RBP	4.08	□□□□□ -1.76
VPS33	YLR396C	DID4	P36108	232 aa		4.08	□□□□□ -1.76
VPS33	YLR396C	APN2	P38207	520 aa		4.08	□□□□□ -1.76
VPS33	YLR396C	YBR053C	P38235	358 aa		4.08	□□□□□ -1.76
VPS33	YLR396C	YBR071W	P38243	211 aa		4.08	□□□□□ -1.76
VPS33	YLR396C	YHR202W	P38887	602 aa		4.08	□□□□□ -1.76
VPS33	YLR396C	IOC4	Q04213	475 aa		4.08	□□□□□ -1.76
VPS33	YLR396C	DLT1	Q04216	342 aa		4.08	□□□□□ -1.76
VPS33	YLR396C	URN1	Q06525	465 aa	Known RBP	4.08	□□□□□ -1.76
VPS33	YLR396C	HFI1	Q12060	488 aa		4.08	□□□□□ -1.76
VPS33	YLR396C	APM4	Q99186	491 aa		4.08	□□□□□ -1.76
VPS33	YLR396C	ECM5	Q03214	1411 aa		4.08	□□□□□ -1.76
VPS33	YLR396C	MYO2	P19524	1574 aa	Known RBP	4.08	□□□□□ -1.76
VPS33	YLR396C	SWI6	P09959	803 aa		4.07	□□□□□ -1.76

Retrieved 100 of 5,963 RNA–protein pairs in 7.5 ms