RNA–Protein interactions for RNA: YLR272C

YCS4, Transcript of Subunit of the condensin complex, yeast

Gene YCS4, Length 3,531 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
YCS4	YLR272C	YOR111W	Q99210	232 aa		1.75	□□□□□ -2.13
YCS4	YLR272C	GPM1	P00950	247 aa	Known RBP	1.75	□□□□□ -2.13
YCS4	YLR272C	AFG2	P32794	780 aa		1.75	□□□□□ -2.13
YCS4	YLR272C	SWE1	P32944	819 aa		1.75	□□□□□ -2.13
YCS4	YLR272C	YEL025C	P39991	1188 aa		1.75	□□□□□ -2.13
YCS4	YLR272C	PIP2	P52960	996 aa		1.75	□□□□□ -2.13
YCS4	YLR272C	GUP1	P53154	560 aa		1.75	□□□□□ -2.13
YCS4	YLR272C	SSY1	Q03770	852 aa		1.75	□□□□□ -2.13
YCS4	YLR272C	SPC19	Q03954	165 aa		1.75	□□□□□ -2.13
YCS4	YLR272C	STP3	Q05937	343 aa		1.75	□□□□□ -2.13
YCS4	YLR272C	YOL114C	Q12322	202 aa		1.75	□□□□□ -2.13
YCS4	YLR272C	SWC3	P31376	625 aa		1.74	□□□□□ -2.13
YCS4	YLR272C	APE3	P37302	537 aa	Known RBP	1.74	□□□□□ -2.13
YCS4	YLR272C	ENV11	P53246	860 aa		1.74	□□□□□ -2.13
YCS4	YLR272C	MFM1	Q02783	413 aa		1.74	□□□□□ -2.13
YCS4	YLR272C	MLC2	Q06580	163 aa		1.74	□□□□□ -2.13
YCS4	YLR272C	MCA1	Q08601	432 aa		1.74	□□□□□ -2.13
YCS4	YLR272C	YLR149C	Q99296	730 aa		1.74	□□□□□ -2.13
YCS4	YLR272C	CYC1	P00044	109 aa	Predicted RBP	1.74	□□□□□ -2.13
YCS4	YLR272C	CYC7	P00045	113 aa		1.74	□□□□□ -2.13
YCS4	YLR272C	AI1	P03875	834 aa		1.74	□□□□□ -2.13
YCS4	YLR272C	ADP1	P25371	1049 aa		1.74	□□□□□ -2.13
YCS4	YLR272C	DBF4	P32325	704 aa		1.74	□□□□□ -2.13
YCS4	YLR272C	GLY1	P37303	387 aa	Known RBP	1.74	□□□□□ -2.13
YCS4	YLR272C	GSM1	P42950	618 aa		1.74	□□□□□ -2.13
YCS4	YLR272C	GNP1	P48813	663 aa		1.74	□□□□□ -2.13
YCS4	YLR272C	PRP31	P49704	494 aa	Predicted RBP	1.74	□□□□□ -2.13
YCS4	YLR272C	YRB30	P53107	440 aa	Predicted RBP	1.74	□□□□□ -2.13
YCS4	YLR272C	PCL10	P53124	433 aa		1.74	□□□□□ -2.13
YCS4	YLR272C	YMR187C	Q03236	431 aa		1.74	□□□□□ -2.13
YCS4	YLR272C	YDR338C	Q05497	695 aa		1.74	□□□□□ -2.13
YCS4	YLR272C	AIM41	Q12032	185 aa		1.74	□□□□□ -2.13
YCS4	YLR272C	ISA2	Q12425	185 aa		1.74	□□□□□ -2.13
YCS4	YLR272C	STF1	P01098	86 aa		1.74	□□□□□ -2.13
YCS4	YLR272C	POL3	P15436	1097 aa		1.74	□□□□□ -2.13
YCS4	YLR272C	SIP1	P32578	815 aa		1.74	□□□□□ -2.13
YCS4	YLR272C	POL12	P38121	705 aa	Predicted RBP	1.74	□□□□□ -2.13
YCS4	YLR272C	PSY4	P38193	441 aa		1.74	□□□□□ -2.13
YCS4	YLR272C	RIM11	P38615	370 aa		1.74	□□□□□ -2.13
YCS4	YLR272C	PFK26	P40433	827 aa	Known RBP	1.74	□□□□□ -2.13
YCS4	YLR272C	NOP2	P40991	618 aa	Known RBP	1.74	□□□□□ -2.13
YCS4	YLR272C	MAD3	P47074	515 aa		1.74	□□□□□ -2.13
YCS4	YLR272C	CTR1	P49573	406 aa		1.74	□□□□□ -2.13
YCS4	YLR272C	ZIP2	P53061	704 aa		1.74	□□□□□ -2.13
YCS4	YLR272C	ART5	P53244	586 aa	Known RBP	1.74	□□□□□ -2.13
YCS4	YLR272C	YGR283C	P53336	341 aa	Predicted RBP	1.74	□□□□□ -2.13
YCS4	YLR272C	UBX4	P54730	416 aa		1.74	□□□□□ -2.13
YCS4	YLR272C	ATG21	Q02887	496 aa		1.74	□□□□□ -2.13
YCS4	YLR272C	TDA6	Q06466	467 aa		1.74	□□□□□ -2.13
YCS4	YLR272C	MDM38	Q08179	573 aa		1.74	□□□□□ -2.13
YCS4	YLR272C	PYC1	P11154	1178 aa	Known RBP	1.73	□□□□□ -2.13
YCS4	YLR272C	RIT1	P23796	513 aa		1.73	□□□□□ -2.13
YCS4	YLR272C	NGG1	P32494	702 aa		1.73	□□□□□ -2.13
YCS4	YLR272C	SMY2	P32909	740 aa	Known RBP	1.73	□□□□□ -2.13
YCS4	YLR272C	RMA1	P36001	430 aa	Known RBP	1.73	□□□□□ -2.13
YCS4	YLR272C	PNT1	P38969	423 aa		1.73	□□□□□ -2.13
YCS4	YLR272C	GUS1	P46655	708 aa	Known RBP RIP-Chip data	1.73	□□□□□ -2.13	not detected
YCS4	YLR272C	IDS2	P46958	469 aa		1.73	□□□□□ -2.13
YCS4	YLR272C	MNT2	P53059	558 aa		1.73	□□□□□ -2.13
YCS4	YLR272C	NRG1	Q03125	231 aa		1.73	□□□□□ -2.13
YCS4	YLR272C	SRT1	Q03175	343 aa		1.73	□□□□□ -2.13
YCS4	YLR272C	ARA2	Q04212	335 aa		1.73	□□□□□ -2.13
YCS4	YLR272C	TY1A-MR1	Q04215	440 aa		1.73	□□□□□ -2.13
YCS4	YLR272C	NGL1	Q08213	363 aa	Known RBP	1.73	□□□□□ -2.13
YCS4	YLR272C	ENV7	Q12003	364 aa		1.73	□□□□□ -2.13
YCS4	YLR272C	PHO5	P00635	467 aa		1.73	□□□□□ -2.13
YCS4	YLR272C	HSP78	P33416	811 aa		1.73	□□□□□ -2.13
YCS4	YLR272C	REG2	P38232	338 aa		1.73	□□□□□ -2.13
YCS4	YLR272C	HFM1	P51979	1187 aa		1.73	□□□□□ -2.13
YCS4	YLR272C	DSE4	P53753	1117 aa		1.73	□□□□□ -2.13
YCS4	YLR272C	SKY1	Q03656	742 aa		1.73	□□□□□ -2.13
YCS4	YLR272C	TY1A-BL	Q12266	440 aa		1.73	□□□□□ -2.13
YCS4	YLR272C	HSF1	P10961	833 aa		1.73	□□□□□ -2.13
YCS4	YLR272C	BET2	P20133	325 aa		1.73	□□□□□ -2.13
YCS4	YLR272C	PRP45	P28004	379 aa	Predicted RBP	1.73	□□□□□ -2.13
YCS4	YLR272C	HXT4	P32467	576 aa		1.73	□□□□□ -2.13
YCS4	YLR272C	DID4	P36108	232 aa		1.73	□□□□□ -2.13
YCS4	YLR272C	TOS1	P38288	455 aa		1.73	□□□□□ -2.13
YCS4	YLR272C	YHR078W	P38799	552 aa		1.73	□□□□□ -2.13
YCS4	YLR272C	YJL055W	P47044	245 aa		1.73	□□□□□ -2.13
YCS4	YLR272C	NNF2	P53253	936 aa		1.73	□□□□□ -2.13
YCS4	YLR272C	HAL9	Q12180	1030 aa		1.73	□□□□□ -2.13
YCS4	YLR272C	SES1	P07284	462 aa	Known RBP	1.72	□□□□□ -2.13
YCS4	YLR272C	MIS1	P09440	975 aa	Known RBP	1.72	□□□□□ -2.13
YCS4	YLR272C	YEL076C-A	P0CX16	216 aa		1.72	□□□□□ -2.13
YCS4	YLR272C	YLR464W	P0CX17	216 aa		1.72	□□□□□ -2.13
YCS4	YLR272C	TIF4631	P39935	952 aa	Known RBP	1.72	□□□□□ -2.13
YCS4	YLR272C	YEL076C	P39971	216 aa		1.72	□□□□□ -2.13
YCS4	YLR272C	MPH1	P40562	993 aa		1.72	□□□□□ -2.13
YCS4	YLR272C	SAP185	P40856	1058 aa		1.72	□□□□□ -2.13
YCS4	YLR272C	GZF3	P42944	551 aa	Known RBP	1.72	□□□□□ -2.13
YCS4	YLR272C	YGR012W	P53206	393 aa		1.72	□□□□□ -2.13
YCS4	YLR272C	YKR011C	Q02209	353 aa		1.72	□□□□□ -2.13
YCS4	YLR272C	GIS4	Q04233	774 aa		1.72	□□□□□ -2.13
YCS4	YLR272C	DIA2	Q08496	732 aa	Predicted RBP	1.72	□□□□□ -2.13
YCS4	YLR272C	RPS17A	P02407	136 aa	Known RBP	1.72	□□□□□ -2.13
YCS4	YLR272C	RPS17B	P14127	136 aa	Known RBP	1.72	□□□□□ -2.13
YCS4	YLR272C	SAN1	P22470	610 aa		1.72	□□□□□ -2.13
YCS4	YLR272C	PCL2	P25693	308 aa		1.72	□□□□□ -2.13
YCS4	YLR272C	NUP120	P35729	1037 aa		1.72	□□□□□ -2.13

Retrieved 100 of 5,963 RNA–protein pairs in 12.4 ms