RNA–Protein interactions for RNA: YLR176C

RFX1, Transcript of Major transcriptional repressor of DNA-damage-regulated genes, yeastyeast

Gene RFX1, Length 2,436 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RFX1YLR176C DNM1P54861 757 aa2.36□□□□□ -2.03
RFX1YLR176C RNT1Q02555 471 aa2.36□□□□□ -2.03
RFX1YLR176C TGL5Q12043 749 aa2.36□□□□□ -2.03
RFX1YLR176C ALG7P07286 448 aa2.36□□□□□ -2.03
RFX1YLR176C CAF20P12962 161 aaKnown RBP2.36□□□□□ -2.03
RFX1YLR176C YEL1P34225 687 aa2.36□□□□□ -2.03
RFX1YLR176C YBR259WP38338 688 aa2.36□□□□□ -2.03
RFX1YLR176C PCM1P38628 557 aaKnown RBP2.36□□□□□ -2.03
RFX1YLR176C CHS7P38843 316 aa2.36□□□□□ -2.03
RFX1YLR176C YBP2P53169 641 aa2.36□□□□□ -2.03
RFX1YLR176C ORC4P54791 529 aa2.36□□□□□ -2.03
RFX1YLR176C FRE5Q08908 694 aa2.36□□□□□ -2.03
RFX1YLR176C GIN4Q12263 1142 aa2.36□□□□□ -2.03
RFX1YLR176C PRP31P49704 494 aaPredicted RBP2.35□□□□□ -2.03
RFX1YLR176C MET13P53128 600 aa2.35□□□□□ -2.03
RFX1YLR176C SDA1P53313 767 aaKnown RBP2.35□□□□□ -2.03
RFX1YLR176C COG8Q04632 607 aa2.35□□□□□ -2.03
RFX1YLR176C YKR018CP36114 725 aa2.34□□□□□ -2.03
RFX1YLR176C YBR053CP38235 358 aa2.34□□□□□ -2.03
RFX1YLR176C MIP6P38760 659 aaKnown RBP2.34□□□□□ -2.03
RFX1YLR176C YJR142WP47173 342 aa2.34□□□□□ -2.03
RFX1YLR176C PCL10P53124 433 aa2.34□□□□□ -2.03
RFX1YLR176C YMR206WQ03695 313 aa2.34□□□□□ -2.03
RFX1YLR176C UTP14Q04500 899 aaKnown RBP2.34□□□□□ -2.03
RFX1YLR176C GUD1Q07729 489 aa2.34□□□□□ -2.03
RFX1YLR176C PPR1P07272 904 aaPredicted RBP2.34□□□□□ -2.03
RFX1YLR176C ADE2P21264 571 aaKnown RBP2.34□□□□□ -2.03
RFX1YLR176C CCR4P31384 837 aaKnown RBP2.34□□□□□ -2.03
RFX1YLR176C YIR042CP40586 236 aa2.34□□□□□ -2.03
RFX1YLR176C HLJ1P48353 224 aa2.34□□□□□ -2.03
RFX1YLR176C AMA1P50082 593 aa2.34□□□□□ -2.03
RFX1YLR176C TEX1P53851 422 aaKnown RBP2.34□□□□□ -2.03
RFX1YLR176C ARP4P80428 489 aa2.34□□□□□ -2.03
RFX1YLR176C GAD1Q04792 585 aa2.34□□□□□ -2.03
RFX1YLR176C ADY4Q05955 493 aa2.34□□□□□ -2.03
RFX1YLR176C LAT1P12695 482 aaKnown RBP2.33□□□□□ -2.04
RFX1YLR176C MNN4P36044 1178 aa2.33□□□□□ -2.04
RFX1YLR176C PPS1P38148 807 aa2.33□□□□□ -2.04
RFX1YLR176C YHR112CP38716 378 aa2.33□□□□□ -2.04
RFX1YLR176C FPR3P38911 411 aaKnown RBP2.33□□□□□ -2.04
RFX1YLR176C MGS1P40151 587 aa2.33□□□□□ -2.04
RFX1YLR176C CTF4Q01454 927 aa2.33□□□□□ -2.04
RFX1YLR176C LEE1Q02799 301 aaKnown RBP2.33□□□□□ -2.04
RFX1YLR176C IRC13Q08630 104 aa2.33□□□□□ -2.04
RFX1YLR176C YGR161W-CQ3E744 92 aa2.33□□□□□ -2.04
RFX1YLR176C BRN1P38170 754 aa2.33□□□□□ -2.04
RFX1YLR176C ARG5,6Q01217 863 aa2.33□□□□□ -2.04
RFX1YLR176C SSD1P24276 1250 aaKnown RBP RIP-Chip data2.32□□□□□ -2.04not detected
RFX1YLR176C HIS7P33734 552 aaKnown RBP2.32□□□□□ -2.04
RFX1YLR176C APL2P36000 726 aaPredicted RBP2.32□□□□□ -2.04
RFX1YLR176C APT2P36973 181 aa2.32□□□□□ -2.04
RFX1YLR176C ECM1P39715 212 aa2.32□□□□□ -2.04
RFX1YLR176C HOS4P40480 1083 aa2.32□□□□□ -2.04
RFX1YLR176C YJL163CP46996 555 aa2.32□□□□□ -2.04
RFX1YLR176C BRE5P53741 515 aaKnown RBP2.32□□□□□ -2.04
RFX1YLR176C MUK1Q02866 612 aa2.32□□□□□ -2.04
RFX1YLR176C THI73Q07904 523 aa2.32□□□□□ -2.04
RFX1YLR176C AIM44Q99299 758 aa2.32□□□□□ -2.04
RFX1YLR176C ERG6P25087 383 aaKnown RBP2.32□□□□□ -2.04
RFX1YLR176C SPC42P36094 363 aa2.32□□□□□ -2.04
RFX1YLR176C BCD1P38772 366 aa2.32□□□□□ -2.04
RFX1YLR176C STB4P50104 949 aa2.32□□□□□ -2.04
RFX1YLR176C MTL1P53214 551 aa2.32□□□□□ -2.04
RFX1YLR176C OMS1Q06668 471 aa2.32□□□□□ -2.04
RFX1YLR176C MCM21Q06675 368 aa2.32□□□□□ -2.04
RFX1YLR176C ATG11Q12527 1178 aa2.32□□□□□ -2.04
RFX1YLR176C TRZ1P36159 838 aaPredicted RBP2.31□□□□□ -2.04
RFX1YLR176C MOH1P38191 138 aa2.31□□□□□ -2.04
RFX1YLR176C CRP1P38845 465 aaKnown RBP2.31□□□□□ -2.04
RFX1YLR176C YJR096WP47137 282 aa2.31□□□□□ -2.04
RFX1YLR176C COX18P53239 316 aa2.31□□□□□ -2.04
RFX1YLR176C YNR029CP53729 429 aaKnown RBP2.31□□□□□ -2.04
RFX1YLR176C CTK1Q03957 528 aaKnown RBP2.31□□□□□ -2.04
RFX1YLR176C DCS2Q12123 353 aa2.31□□□□□ -2.04
RFX1YLR176C HRP1Q99383 534 aaKnown RBP2.31□□□□□ -2.04
RFX1YLR176C NUP145P49687 1317 aa2.31□□□□□ -2.04
RFX1YLR176C PRP19P32523 503 aaKnown RBP2.31□□□□□ -2.04
RFX1YLR176C OAR1P35731 278 aa2.31□□□□□ -2.04
RFX1YLR176C TYS1P36421 394 aaKnown RBP2.31□□□□□ -2.04
RFX1YLR176C APN2P38207 520 aa2.31□□□□□ -2.04
RFX1YLR176C SSZ1P38788 538 aaKnown RBP2.31□□□□□ -2.04
RFX1YLR176C LYS9P38999 446 aa2.31□□□□□ -2.04
RFX1YLR176C CCT3P39077 534 aaKnown RBP2.31□□□□□ -2.04
RFX1YLR176C YNL195CP40168 261 aa2.31□□□□□ -2.04
RFX1YLR176C BAP3P41815 604 aa2.31□□□□□ -2.04
RFX1YLR176C SET2P46995 733 aaKnown RBP2.31□□□□□ -2.04
RFX1YLR176C DOS2P54858 310 aa2.31□□□□□ -2.04
RFX1YLR176C GIS1Q03833 894 aa2.31□□□□□ -2.04
RFX1YLR176C ACF2Q12168 779 aa2.31□□□□□ -2.04
RFX1YLR176C PYC1P11154 1178 aaKnown RBP2.3□□□□□ -2.04
RFX1YLR176C RNR1P21524 888 aaKnown RBP2.3□□□□□ -2.04
RFX1YLR176C MVD1P32377 396 aaKnown RBP2.3□□□□□ -2.04
RFX1YLR176C TDA3P38758 523 aa2.3□□□□□ -2.04
RFX1YLR176C FMO1P38866 432 aa2.3□□□□□ -2.04
RFX1YLR176C CKB2P38930 258 aa2.3□□□□□ -2.04
RFX1YLR176C GID8P40208 455 aa2.3□□□□□ -2.04
RFX1YLR176C DAS1P47005 663 aa2.3□□□□□ -2.04
RFX1YLR176C YJR039WP47107 1121 aa2.3□□□□□ -2.04
RFX1YLR176C UBC11P52492 156 aa2.3□□□□□ -2.04
RFX1YLR176C REC102Q02721 264 aa2.3□□□□□ -2.04
Retrieved 100 of 5,963 RNA–protein pairs in 22.8 ms