RNA–Protein interactions for RNA: YKL054C

DEF1, Transcript of RNAPII degradation factor, yeastyeast

Gene DEF1, Length 2,217 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
DEF1YKL054C YEL068CP39977 110 aa6.58□□□□□ -1.36
DEF1YKL054C JEM1P40358 645 aa6.58□□□□□ -1.36
DEF1YKL054C CPR6P53691 371 aaKnown RBP6.58□□□□□ -1.36
DEF1YKL054C NHX1Q04121 633 aa6.58□□□□□ -1.36
DEF1YKL054C GUK1P15454 187 aaKnown RBP6.58□□□□□ -1.36
DEF1YKL054C CDC48P25694 835 aaKnown RBP6.58□□□□□ -1.36
DEF1YKL054C REC104P33323 182 aa6.58□□□□□ -1.36
DEF1YKL054C TFA2P36145 328 aa6.58□□□□□ -1.36
DEF1YKL054C YRO2P38079 344 aa6.58□□□□□ -1.36
DEF1YKL054C TDA3P38758 523 aa6.58□□□□□ -1.36
DEF1YKL054C RKM2Q03942 479 aa6.58□□□□□ -1.36
DEF1YKL054C VID22Q05934 901 aa6.58□□□□□ -1.36
DEF1YKL054C OMS1Q06668 471 aa6.58□□□□□ -1.36
DEF1YKL054C INO80P53115 1489 aa6.58□□□□□ -1.36
DEF1YKL054C YCL049CP25577 312 aa6.57□□□□□ -1.36
DEF1YKL054C PER1P25625 357 aa6.57□□□□□ -1.36
DEF1YKL054C CBF2P32504 956 aa6.57□□□□□ -1.36
DEF1YKL054C YKL151CP36059 337 aa6.57□□□□□ -1.36
DEF1YKL054C PGM2P37012 569 aaKnown RBP6.57□□□□□ -1.36
DEF1YKL054C SRP72P38688 640 aaKnown RBP6.57□□□□□ -1.36
DEF1YKL054C YER156CP40093 338 aaKnown RBP6.57□□□□□ -1.36
DEF1YKL054C YIL166CP40445 542 aa6.57□□□□□ -1.36
DEF1YKL054C SMK1P41808 388 aa6.57□□□□□ -1.36
DEF1YKL054C YDR131CQ03899 556 aa6.57□□□□□ -1.36
DEF1YKL054C LAP2Q10740 671 aa6.57□□□□□ -1.36
DEF1YKL054C ADE8P04161 214 aa6.57□□□□□ -1.36
DEF1YKL054C CDC16P09798 840 aa6.57□□□□□ -1.36
DEF1YKL054C ERG3P32353 365 aa6.57□□□□□ -1.36
DEF1YKL054C YKL077WP36081 392 aa6.57□□□□□ -1.36
DEF1YKL054C YTA6P40328 754 aa6.57□□□□□ -1.36
DEF1YKL054C SAE2P46946 345 aa6.57□□□□□ -1.36
DEF1YKL054C UTP22P53254 1237 aaPredicted RBP6.57□□□□□ -1.36
DEF1YKL054C DAM1P53267 343 aa6.57□□□□□ -1.36
DEF1YKL054C TIM11P81449 96 aaPredicted RBP6.57□□□□□ -1.36
DEF1YKL054C HOT1Q03213 719 aa6.57□□□□□ -1.36
DEF1YKL054C ISA1Q07821 250 aaPredicted RBP6.57□□□□□ -1.36
DEF1YKL054C QCR6P00127 147 aa6.56□□□□□ -1.36
DEF1YKL054C ORC2P32833 620 aa6.56□□□□□ -1.36
DEF1YKL054C MTH1P35198 433 aa6.56□□□□□ -1.36
DEF1YKL054C YBR225WP38321 900 aa6.56□□□□□ -1.36
DEF1YKL054C NPR2P39923 615 aa6.56□□□□□ -1.36
DEF1YKL054C UBC9P50623 157 aaPredicted RBP6.56□□□□□ -1.36
DEF1YKL054C ADY3Q07732 790 aa6.56□□□□□ -1.36
DEF1YKL054C KCS1Q12494 1050 aa6.56□□□□□ -1.36
DEF1YKL054C PDX1P16451 410 aa6.56□□□□□ -1.36
DEF1YKL054C POL4P25615 582 aa6.56□□□□□ -1.36
DEF1YKL054C BYE1P36106 594 aa6.56□□□□□ -1.36
DEF1YKL054C YER010CP40011 234 aa6.56□□□□□ -1.36
DEF1YKL054C MXR1P40029 184 aa6.56□□□□□ -1.36
DEF1YKL054C PPT1P53043 513 aa6.56□□□□□ -1.36
DEF1YKL054C CUZ1P53899 274 aa6.56□□□□□ -1.36
DEF1YKL054C RPL11AP0C0W9 174 aaKnown RBP6.55□□□□□ -1.36
DEF1YKL054C MRPL16P38064 232 aa6.55□□□□□ -1.36
DEF1YKL054C POP2P39008 433 aa6.55□□□□□ -1.36
DEF1YKL054C PUG1P40100 303 aa6.55□□□□□ -1.36
DEF1YKL054C YJR124CP47159 448 aa6.55□□□□□ -1.36
DEF1YKL054C RNR4P49723 345 aaKnown RBP6.55□□□□□ -1.36
DEF1YKL054C YNR065CP53751 1116 aa6.55□□□□□ -1.36
DEF1YKL054C YPL071CQ02864 156 aa6.55□□□□□ -1.36
DEF1YKL054C YHM2Q04013 314 aa6.55□□□□□ -1.36
DEF1YKL054C YLR345WQ06137 509 aa6.55□□□□□ -1.36
DEF1YKL054C NUR1Q12066 484 aa6.55□□□□□ -1.36
DEF1YKL054C RPL11BQ3E757 174 aaPredicted RBP6.55□□□□□ -1.36
DEF1YKL054C NGG1P32494 702 aa6.54□□□□□ -1.36
DEF1YKL054C SLC1P33333 303 aa6.54□□□□□ -1.36
DEF1YKL054C APM3P38153 483 aa6.54□□□□□ -1.36
DEF1YKL054C YHR202WP38887 602 aa6.54□□□□□ -1.36
DEF1YKL054C EAF5P39995 279 aa6.54□□□□□ -1.36
DEF1YKL054C YIL092WP40497 633 aa6.54□□□□□ -1.36
DEF1YKL054C MAD3P47074 515 aa6.54□□□□□ -1.36
DEF1YKL054C ZIP2P53061 704 aa6.54□□□□□ -1.36
DEF1YKL054C BIO5P53744 561 aaKnown RBP6.54□□□□□ -1.36
DEF1YKL054C YDR341CQ05506 607 aaKnown RBP6.54□□□□□ -1.36
DEF1YKL054C OLE1P21147 510 aaKnown RBP6.54□□□□□ -1.36
DEF1YKL054C CBP3P21560 335 aa6.54□□□□□ -1.36
DEF1YKL054C UBC1P21734 215 aaKnown RBP6.54□□□□□ -1.36
DEF1YKL054C ADP1P25371 1049 aa6.54□□□□□ -1.36
DEF1YKL054C LTP1P40347 161 aa6.54□□□□□ -1.36
DEF1YKL054C PTA1Q01329 785 aaPredicted RBP6.54□□□□□ -1.36
DEF1YKL054C STE13P33894 931 aa6.53□□□□□ -1.36
DEF1YKL054C HSL7P38274 827 aa6.53□□□□□ -1.36
DEF1YKL054C IFA38P38286 347 aa6.53□□□□□ -1.36
DEF1YKL054C INP51P40559 946 aaKnown RBP6.53□□□□□ -1.36
DEF1YKL054C MRPL13Q02204 264 aa6.53□□□□□ -1.36
DEF1YKL054C HCA4P20448 770 aaKnown RBP6.53□□□□□ -1.36
DEF1YKL054C DIT1P21623 536 aa6.53□□□□□ -1.36
DEF1YKL054C TSL1P38427 1098 aaKnown RBP6.53□□□□□ -1.36
DEF1YKL054C DCS2Q12123 353 aa6.53□□□□□ -1.36
DEF1YKL054C CEX1Q12453 761 aa6.53□□□□□ -1.36
DEF1YKL054C ADH4P10127 382 aa6.52□□□□□ -1.37
DEF1YKL054C HSF1P10961 833 aa6.52□□□□□ -1.37
DEF1YKL054C CDC26P14724 124 aa6.52□□□□□ -1.37
DEF1YKL054C PHO3P24031 467 aa6.52□□□□□ -1.37
DEF1YKL054C YMR155WQ03795 547 aa6.52□□□□□ -1.37
DEF1YKL054C MFB1Q04922 465 aa6.52□□□□□ -1.37
DEF1YKL054C HRQ1Q05549 1077 aa6.52□□□□□ -1.37
DEF1YKL054C SMF3Q12078 473 aaPredicted RBP6.52□□□□□ -1.37
DEF1YKL054C LEU2P04173 364 aaPredicted RBP6.52□□□□□ -1.37
DEF1YKL054C CKA1P15790 372 aa6.52□□□□□ -1.37
DEF1YKL054C GLK1P17709 500 aaKnown RBP6.52□□□□□ -1.37
Retrieved 100 of 5,963 RNA–protein pairs in 40.1 ms