RNA–Protein interactions for RNA: YGL238W

CSE1, Transcript of Nuclear envelope protein that mediates the nuclear export of Srp1p, yeastyeast

Gene CSE1, Length 2,883 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CSE1YGL238W PIP2P52960 996 aa0.97□□□□□ -2.25
CSE1YGL238W MAL11P53048 616 aa0.97□□□□□ -2.25
CSE1YGL238W YGR283CP53336 341 aaPredicted RBP0.97□□□□□ -2.25
CSE1YGL238W SNF12P53628 566 aa0.97□□□□□ -2.25
CSE1YGL238W YDR338CQ05497 695 aa0.97□□□□□ -2.25
CSE1YGL238W HBN1Q96VH4 193 aa0.97□□□□□ -2.25
CSE1YGL238W MSD1P15179 658 aaKnown RBP0.96□□□□□ -2.26
CSE1YGL238W REC104P33323 182 aa0.96□□□□□ -2.26
CSE1YGL238W YMC2P38087 329 aa0.96□□□□□ -2.26
CSE1YGL238W PBY1P38254 753 aa0.96□□□□□ -2.26
CSE1YGL238W YHR112CP38716 378 aa0.96□□□□□ -2.26
CSE1YGL238W PZF1P39933 429 aa0.96□□□□□ -2.26
CSE1YGL238W ARG2P40360 574 aa0.96□□□□□ -2.26
CSE1YGL238W CCM1P48237 864 aaPredicted RBP0.96□□□□□ -2.26
CSE1YGL238W PAN2P53010 1115 aaPredicted RBP0.96□□□□□ -2.26
CSE1YGL238W DNA2P38859 1522 aa0.96□□□□□ -2.26
CSE1YGL238W ERG11P10614 530 aa0.96□□□□□ -2.26
CSE1YGL238W ADE2P21264 571 aaKnown RBP0.96□□□□□ -2.26
CSE1YGL238W SLD2P34252 453 aa0.96□□□□□ -2.26
CSE1YGL238W REV7P38927 245 aa0.96□□□□□ -2.26
CSE1YGL238W KRI1P42846 591 aaKnown RBP0.96□□□□□ -2.26
CSE1YGL238W UBC9P50623 157 aaPredicted RBP0.96□□□□□ -2.26
CSE1YGL238W MTL1P53214 551 aa0.96□□□□□ -2.26
CSE1YGL238W YML020WQ03722 664 aa0.96□□□□□ -2.26
CSE1YGL238W TAF8Q03750 510 aa0.96□□□□□ -2.26
CSE1YGL238W FMP25Q08023 583 aa0.96□□□□□ -2.26
CSE1YGL238W YKL033W-AQ86ZR7 236 aa0.96□□□□□ -2.26
CSE1YGL238W PHO5P00635 467 aa0.95□□□□□ -2.26
CSE1YGL238W PPH3P32345 308 aa0.95□□□□□ -2.26
CSE1YGL238W MRP8P35719 219 aa0.95□□□□□ -2.26
CSE1YGL238W EMC3P36039 253 aa0.95□□□□□ -2.26
CSE1YGL238W BET3P36149 193 aa0.95□□□□□ -2.26
CSE1YGL238W CCT3P39077 534 aaKnown RBP0.95□□□□□ -2.26
CSE1YGL238W GIS2P53849 153 aaKnown RBP RIP-Chip data0.95□□□□□ -2.26not detected
CSE1YGL238W ARG5,6Q01217 863 aa0.95□□□□□ -2.26
CSE1YGL238W ATP25Q03153 612 aa0.95□□□□□ -2.26
CSE1YGL238W YDR306CQ06640 478 aa0.95□□□□□ -2.26
CSE1YGL238W FRE7Q12333 620 aa0.95□□□□□ -2.26
CSE1YGL238W INO80P53115 1489 aa0.95□□□□□ -2.26
CSE1YGL238W NOP1P15646 327 aaKnown RBP0.95□□□□□ -2.26
CSE1YGL238W APN1P22936 367 aa0.95□□□□□ -2.26
CSE1YGL238W SPC29P33419 253 aa0.95□□□□□ -2.26
CSE1YGL238W PHO11P35842 467 aa0.95□□□□□ -2.26
CSE1YGL238W YRO2P38079 344 aa0.95□□□□□ -2.26
CSE1YGL238W PHO12P38693 467 aa0.95□□□□□ -2.26
CSE1YGL238W NUP60P39705 539 aa0.95□□□□□ -2.26
CSE1YGL238W TAD1P53065 400 aa0.95□□□□□ -2.26
CSE1YGL238W ATG4P53867 494 aa0.95□□□□□ -2.26
CSE1YGL238W ARP4P80428 489 aa0.95□□□□□ -2.26
CSE1YGL238W SSF2Q12153 453 aaPredicted RBP0.95□□□□□ -2.26
CSE1YGL238W RPS9AO13516 197 aaKnown RBP0.94□□□□□ -2.26
CSE1YGL238W RAD18P10862 487 aa0.94□□□□□ -2.26
CSE1YGL238W NUP1P20676 1076 aa0.94□□□□□ -2.26
CSE1YGL238W RPL8BP29453 256 aaKnown RBP0.94□□□□□ -2.26
CSE1YGL238W YMC1P32331 307 aa0.94□□□□□ -2.26
CSE1YGL238W AAR2P32357 355 aaPredicted RBP0.94□□□□□ -2.26
CSE1YGL238W YBR184WP38299 523 aa0.94□□□□□ -2.26
CSE1YGL238W MUP3P38734 546 aa0.94□□□□□ -2.26
CSE1YGL238W SAK1P38990 1142 aa0.94□□□□□ -2.26
CSE1YGL238W CCT5P40413 562 aaKnown RBP0.94□□□□□ -2.26
CSE1YGL238W UBP6P43593 499 aaKnown RBP0.94□□□□□ -2.26
CSE1YGL238W SSY5P47002 699 aa0.94□□□□□ -2.26
CSE1YGL238W ZIP2P53061 704 aa0.94□□□□□ -2.26
CSE1YGL238W ARG7Q04728 441 aa0.94□□□□□ -2.26
CSE1YGL238W CYS3P31373 394 aaKnown RBP0.94□□□□□ -2.26
CSE1YGL238W APL2P36000 726 aaPredicted RBP0.94□□□□□ -2.26
CSE1YGL238W YBR259WP38338 688 aa0.94□□□□□ -2.26
CSE1YGL238W LEE1Q02799 301 aaKnown RBP0.94□□□□□ -2.26
CSE1YGL238W EAF1Q06337 982 aa0.94□□□□□ -2.26
CSE1YGL238W THI22Q06490 572 aa0.94□□□□□ -2.26
CSE1YGL238W YOR022CQ12204 715 aa0.94□□□□□ -2.26
CSE1YGL238W CCR4P31384 837 aaKnown RBP0.94□□□□□ -2.26
CSE1YGL238W ASF1P32447 279 aa0.94□□□□□ -2.26
CSE1YGL238W MIP6P38760 659 aaKnown RBP0.94□□□□□ -2.26
CSE1YGL238W BST1P43571 1029 aa0.94□□□□□ -2.26
CSE1YGL238W JSN1P47135 1091 aaKnown RBP RIP-Chip data0.94□□□□□ -2.26not detected
CSE1YGL238W ORC4P54791 529 aa0.94□□□□□ -2.26
CSE1YGL238W FAL1Q12099 399 aaKnown RBP0.94□□□□□ -2.26
CSE1YGL238W RPA135P22138 1203 aaKnown RBP0.93□□□□□ -2.26
CSE1YGL238W CCT4P39078 528 aaKnown RBP0.93□□□□□ -2.26
CSE1YGL238W NOG2P53742 486 aaKnown RBP0.93□□□□□ -2.26
CSE1YGL238W YPR071WQ12346 211 aa0.93□□□□□ -2.26
CSE1YGL238W DAL7P21826 554 aa0.93□□□□□ -2.26
CSE1YGL238W FUB1P25659 250 aa0.93□□□□□ -2.26
CSE1YGL238W SFB3P38810 929 aa0.93□□□□□ -2.26
CSE1YGL238W IRC8P47046 822 aa0.93□□□□□ -2.26
CSE1YGL238W NOP9P47077 666 aaKnown RBP0.93□□□□□ -2.26
CSE1YGL238W STP1Q00947 519 aa0.93□□□□□ -2.26
CSE1YGL238W MCM21Q06675 368 aa0.93□□□□□ -2.26
CSE1YGL238W DNF1P32660 1571 aa0.92□□□□□ -2.26
CSE1YGL238W ADE5,7P07244 802 aaKnown RBP0.92□□□□□ -2.26
CSE1YGL238W YER190C-BP0CX94 160 aa0.92□□□□□ -2.26
CSE1YGL238W YEL077W-AP0CX95 160 aa0.92□□□□□ -2.26
CSE1YGL238W YGR296C-BP0CX96 160 aa0.92□□□□□ -2.26
CSE1YGL238W YPL283W-BP0CX97 160 aa0.92□□□□□ -2.26
CSE1YGL238W YPR204C-AP0CX98 160 aa0.92□□□□□ -2.26
CSE1YGL238W PRI2P20457 528 aa0.92□□□□□ -2.26
CSE1YGL238W MCD4P36051 919 aa0.92□□□□□ -2.26
CSE1YGL238W YBR284WP38150 797 aa0.92□□□□□ -2.26
CSE1YGL238W ULP2P40537 1034 aaPredicted RBP0.92□□□□□ -2.26
Retrieved 100 of 5,963 RNA–protein pairs in 7 ms