RNA–Protein interactions for RNA: YGL025C

PGD1, Transcript of Subunit of the RNA polymerase II mediator complex, yeast

Gene PGD1, Length 1,194 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
PGD1	YGL025C	PPG1	P32838	368 aa		4.58	□□□□□ -1.68
PGD1	YGL025C	HSL7	P38274	827 aa		4.58	□□□□□ -1.68
PGD1	YGL025C	MIP6	P38760	659 aa	Known RBP	4.58	□□□□□ -1.68
PGD1	YGL025C	YFL052W	P43551	465 aa		4.58	□□□□□ -1.68
PGD1	YGL025C	STB4	P50104	949 aa		4.58	□□□□□ -1.68
PGD1	YGL025C	YMR206W	Q03695	313 aa		4.58	□□□□□ -1.68
PGD1	YGL025C	YLR001C	Q07895	862 aa		4.58	□□□□□ -1.68
PGD1	YGL025C	LAT1	P12695	482 aa	Known RBP	4.57	□□□□□ -1.68
PGD1	YGL025C	ADE2	P21264	571 aa	Known RBP	4.57	□□□□□ -1.68
PGD1	YGL025C	YEL1	P34225	687 aa		4.57	□□□□□ -1.68
PGD1	YGL025C	ECM1	P39715	212 aa		4.57	□□□□□ -1.68
PGD1	YGL025C	YJL163C	P46996	555 aa		4.57	□□□□□ -1.68
PGD1	YGL025C	PRP31	P49704	494 aa	Predicted RBP	4.57	□□□□□ -1.68
PGD1	YGL025C	UBC9	P50623	157 aa	Predicted RBP	4.57	□□□□□ -1.68
PGD1	YGL025C	RPN7	Q06103	429 aa	Known RBP	4.57	□□□□□ -1.68
PGD1	YGL025C	ATG33	Q06485	197 aa		4.57	□□□□□ -1.68
PGD1	YGL025C	OMS1	Q06668	471 aa		4.57	□□□□□ -1.68
PGD1	YGL025C	IRC13	Q08630	104 aa		4.57	□□□□□ -1.68
PGD1	YGL025C	HMG1	P12683	1054 aa		4.56	□□□□□ -1.68
PGD1	YGL025C	SFL1	P20134	766 aa		4.56	□□□□□ -1.68
PGD1	YGL025C	YKR018C	P36114	725 aa		4.56	□□□□□ -1.68
PGD1	YGL025C	PCM1	P38628	557 aa	Known RBP	4.56	□□□□□ -1.68
PGD1	YGL025C	YHR112C	P38716	378 aa		4.56	□□□□□ -1.68
PGD1	YGL025C	NMD2	P38798	1089 aa	Known RBP	4.56	□□□□□ -1.68
PGD1	YGL025C	BAP3	P41815	604 aa		4.56	□□□□□ -1.68
PGD1	YGL025C	AIM14	P53109	570 aa		4.56	□□□□□ -1.68
PGD1	YGL025C	ORC4	P54791	529 aa		4.56	□□□□□ -1.68
PGD1	YGL025C	ARG5,6	Q01217	863 aa		4.56	□□□□□ -1.68
PGD1	YGL025C	TFB2	Q02939	513 aa		4.56	□□□□□ -1.68
PGD1	YGL025C	TMN2	Q04562	672 aa		4.56	□□□□□ -1.68
PGD1	YGL025C	ACF2	Q12168	779 aa		4.56	□□□□□ -1.68
PGD1	YGL025C	ATG11	Q12527	1178 aa		4.56	□□□□□ -1.68
PGD1	YGL025C	YBP2	P53169	641 aa		4.55	□□□□□ -1.68
PGD1	YGL025C	YNL193W	P53870	558 aa		4.55	□□□□□ -1.68
PGD1	YGL025C	ARP4	P80428	489 aa		4.55	□□□□□ -1.68
PGD1	YGL025C	COG8	Q04632	607 aa		4.55	□□□□□ -1.68
PGD1	YGL025C	GAD1	Q04792	585 aa		4.55	□□□□□ -1.68
PGD1	YGL025C	RPL8A	P17076	256 aa	Known RBP	4.54	□□□□□ -1.68
PGD1	YGL025C	ERG6	P25087	383 aa	Known RBP	4.54	□□□□□ -1.68
PGD1	YGL025C	CCR4	P31384	837 aa	Known RBP	4.54	□□□□□ -1.68
PGD1	YGL025C	APL2	P36000	726 aa	Predicted RBP	4.54	□□□□□ -1.68
PGD1	YGL025C	BCD1	P38772	366 aa		4.54	□□□□□ -1.68
PGD1	YGL025C	LYS9	P38999	446 aa		4.54	□□□□□ -1.68
PGD1	YGL025C	PCL10	P53124	433 aa		4.54	□□□□□ -1.68
PGD1	YGL025C	MET13	P53128	600 aa		4.54	□□□□□ -1.68
PGD1	YGL025C	MTL1	P53214	551 aa		4.54	□□□□□ -1.68
PGD1	YGL025C	LEE1	Q02799	301 aa	Known RBP	4.54	□□□□□ -1.68
PGD1	YGL025C	MCH5	Q08777	521 aa		4.54	□□□□□ -1.68
PGD1	YGL025C	GIN4	Q12263	1142 aa		4.54	□□□□□ -1.68
PGD1	YGL025C	NOP14	Q99207	810 aa	Known RBP	4.54	□□□□□ -1.68
PGD1	YGL025C	GID8	P40208	455 aa		4.53	□□□□□ -1.68
PGD1	YGL025C	UBC11	P52492	156 aa		4.53	□□□□□ -1.68
PGD1	YGL025C	HIR1	P32479	840 aa		4.52	□□□□□ -1.69
PGD1	YGL025C	HIS7	P33734	552 aa	Known RBP	4.52	□□□□□ -1.69
PGD1	YGL025C	MNN4	P36044	1178 aa		4.52	□□□□□ -1.69
PGD1	YGL025C	TRZ1	P36159	838 aa	Predicted RBP	4.52	□□□□□ -1.69
PGD1	YGL025C	YHL017W	P38745	532 aa		4.52	□□□□□ -1.69
PGD1	YGL025C	MNN1	P39106	762 aa		4.52	□□□□□ -1.69
PGD1	YGL025C	MGS1	P40151	587 aa		4.52	□□□□□ -1.69
PGD1	YGL025C	DAS1	P47005	663 aa		4.52	□□□□□ -1.69
PGD1	YGL025C	UBA2	P52488	636 aa		4.52	□□□□□ -1.69
PGD1	YGL025C	DNM1	P54861	757 aa		4.52	□□□□□ -1.69
PGD1	YGL025C	HMO1	Q03973	246 aa	Known RBP	4.52	□□□□□ -1.69
PGD1	YGL025C	MCM21	Q06675	368 aa		4.52	□□□□□ -1.69
PGD1	YGL025C	HRP1	Q99383	534 aa	Known RBP	4.52	□□□□□ -1.69
PGD1	YGL025C	FMP52	P40008	231 aa		4.51	□□□□□ -1.69
PGD1	YGL025C	DOT6	P40059	670 aa	Known RBP	4.51	□□□□□ -1.69
PGD1	YGL025C	GND2	P53319	492 aa		4.51	□□□□□ -1.69
PGD1	YGL025C	BRE5	P53741	515 aa	Known RBP	4.51	□□□□□ -1.69
PGD1	YGL025C	RGC1	Q06108	1083 aa	Known RBP	4.51	□□□□□ -1.69
PGD1	YGL025C	SIR3	P06701	978 aa		4.5	□□□□□ -1.69
PGD1	YGL025C	MTH1	P35198	433 aa		4.5	□□□□□ -1.69
PGD1	YGL025C	FMO1	P38866	432 aa		4.5	□□□□□ -1.69
PGD1	YGL025C	SDS3	P40505	327 aa		4.5	□□□□□ -1.69
PGD1	YGL025C	RIA1	P53893	1110 aa		4.5	□□□□□ -1.69
PGD1	YGL025C	TIM44	Q01852	431 aa		4.5	□□□□□ -1.69
PGD1	YGL025C	SGO1	Q08490	590 aa		4.5	□□□□□ -1.69
PGD1	YGL025C	DCS2	Q12123	353 aa		4.5	□□□□□ -1.69
PGD1	YGL025C	TAD3	Q9URQ3	322 aa		4.5	□□□□□ -1.69
PGD1	YGL025C	SSZ1	P38788	538 aa	Known RBP	4.49	□□□□□ -1.69
PGD1	YGL025C	PCL5	P38794	229 aa		4.49	□□□□□ -1.69
PGD1	YGL025C	CCT3	P39077	534 aa	Known RBP	4.49	□□□□□ -1.69
PGD1	YGL025C	NUP60	P39705	539 aa		4.49	□□□□□ -1.69
PGD1	YGL025C	GET2	P40056	285 aa		4.49	□□□□□ -1.69
PGD1	YGL025C	YJR039W	P47107	1121 aa		4.49	□□□□□ -1.69
PGD1	YGL025C	TEL2	P53038	688 aa		4.49	□□□□□ -1.69
PGD1	YGL025C	REC102	Q02721	264 aa		4.49	□□□□□ -1.69
PGD1	YGL025C	CTK1	Q03957	528 aa	Known RBP	4.49	□□□□□ -1.69
PGD1	YGL025C	HBT1	Q07653	1046 aa	Known RBP	4.49	□□□□□ -1.69
PGD1	YGL025C	GUD1	Q07729	489 aa		4.49	□□□□□ -1.69
PGD1	YGL025C	IRC10	Q08118	586 aa		4.49	□□□□□ -1.69
PGD1	YGL025C	RNR1	P21524	888 aa	Known RBP	4.48	□□□□□ -1.69
PGD1	YGL025C	APT2	P36973	181 aa		4.48	□□□□□ -1.69
PGD1	YGL025C	AKL1	P38080	1108 aa	Known RBP	4.48	□□□□□ -1.69
PGD1	YGL025C	HRB1	P38922	454 aa	Known RBP RIP-Chip data	4.48	□□□□□ -1.69	not detected
PGD1	YGL025C	SET2	P46995	733 aa	Known RBP	4.48	□□□□□ -1.69
PGD1	YGL025C	ADR1	P07248	1323 aa		4.47	□□□□□ -1.69
PGD1	YGL025C	SFP1	P32432	683 aa		4.47	□□□□□ -1.69
PGD1	YGL025C	SPC42	P36094	363 aa		4.47	□□□□□ -1.69
PGD1	YGL025C	APN2	P38207	520 aa		4.47	□□□□□ -1.69

Retrieved 100 of 5,963 RNA–protein pairs in 20.3 ms