RNA–Protein interactions for RNA: YER112W

LSM4, Transcript of Lsm (Like Sm) protein, yeast

Gene LSM4, Length 564 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
LSM4	YER112W	SNM1	P40993	198 aa		4.78	□□□□□ -1.64
LSM4	YER112W	BNA2	P47125	453 aa		4.78	□□□□□ -1.64
LSM4	YER112W	PEX19	Q07418	342 aa		4.78	□□□□□ -1.64
LSM4	YER112W	PPR1	P07272	904 aa	Predicted RBP	4.77	□□□□□ -1.65
LSM4	YER112W	CRP1	P38845	465 aa	Known RBP	4.77	□□□□□ -1.65
LSM4	YER112W	SAK1	P38990	1142 aa		4.77	□□□□□ -1.65
LSM4	YER112W	MGS1	P40151	587 aa		4.77	□□□□□ -1.65
LSM4	YER112W	PMT3	P47190	753 aa		4.77	□□□□□ -1.65
LSM4	YER112W	MTR3	P48240	250 aa	Predicted RBP	4.77	□□□□□ -1.65
LSM4	YER112W	TRM11	Q12463	433 aa		4.77	□□□□□ -1.65
LSM4	YER112W	NUP145	P49687	1317 aa		4.76	□□□□□ -1.65
LSM4	YER112W	ALG7	P07286	448 aa		4.76	□□□□□ -1.65
LSM4	YER112W	PCM1	P38628	557 aa	Known RBP	4.76	□□□□□ -1.65
LSM4	YER112W	VHR1	P40522	640 aa		4.76	□□□□□ -1.65
LSM4	YER112W	YMR206W	Q03695	313 aa		4.76	□□□□□ -1.65
LSM4	YER112W	ATG33	Q06485	197 aa		4.76	□□□□□ -1.65
LSM4	YER112W	GUD1	Q07729	489 aa		4.76	□□□□□ -1.65
LSM4	YER112W	GIN4	Q12263	1142 aa		4.76	□□□□□ -1.65
LSM4	YER112W	TUB3	P09734	445 aa	Known RBP	4.75	□□□□□ -1.65
LSM4	YER112W	HMG1	P12683	1054 aa		4.75	□□□□□ -1.65
LSM4	YER112W	MTH1	P35198	433 aa		4.75	□□□□□ -1.65
LSM4	YER112W	PFA3	P42836	336 aa		4.75	□□□□□ -1.65
LSM4	YER112W	YBP2	P53169	641 aa		4.75	□□□□□ -1.65
LSM4	YER112W	LGE1	Q02796	332 aa	Known RBP	4.75	□□□□□ -1.65
LSM4	YER112W	MUS81	Q04149	632 aa	Predicted RBP	4.75	□□□□□ -1.65
LSM4	YER112W	RPN7	Q06103	429 aa	Known RBP	4.75	□□□□□ -1.65
LSM4	YER112W	CTF13	P35203	478 aa		4.74	□□□□□ -1.65
LSM4	YER112W	SIC1	P38634	284 aa		4.74	□□□□□ -1.65
LSM4	YER112W	RPP1	P38786	293 aa		4.74	□□□□□ -1.65
LSM4	YER112W	MET13	P53128	600 aa		4.74	□□□□□ -1.65
LSM4	YER112W	YNR029C	P53729	429 aa	Known RBP	4.74	□□□□□ -1.65
LSM4	YER112W	ERG5	P54781	538 aa		4.74	□□□□□ -1.65
LSM4	YER112W	ORC4	P54791	529 aa		4.74	□□□□□ -1.65
LSM4	YER112W	SLU7	Q02775	382 aa	Known RBP	4.74	□□□□□ -1.65
LSM4	YER112W	THI73	Q07904	523 aa		4.74	□□□□□ -1.65
LSM4	YER112W	YLR149C	Q99296	730 aa		4.74	□□□□□ -1.65
LSM4	YER112W	YLR415C	O13578	112 aa		4.73	□□□□□ -1.65
LSM4	YER112W	YKR018C	P36114	725 aa		4.73	□□□□□ -1.65
LSM4	YER112W	YKR051W	P36142	418 aa		4.73	□□□□□ -1.65
LSM4	YER112W	AIM14	P53109	570 aa		4.73	□□□□□ -1.65
LSM4	YER112W	PCL10	P53124	433 aa		4.73	□□□□□ -1.65
LSM4	YER112W	MUK1	Q02866	612 aa		4.73	□□□□□ -1.65
LSM4	YER112W	UME1	Q03010	460 aa		4.73	□□□□□ -1.65
LSM4	YER112W	MET3	P08536	511 aa		4.72	□□□□□ -1.65
LSM4	YER112W	MIH1	P23748	554 aa		4.72	□□□□□ -1.65
LSM4	YER112W	APT2	P36973	181 aa		4.72	□□□□□ -1.65
LSM4	YER112W	YBR259W	P38338	688 aa		4.72	□□□□□ -1.65
LSM4	YER112W	YGR237C	P50089	785 aa		4.72	□□□□□ -1.65
LSM4	YER112W	UBC9	P50623	157 aa	Predicted RBP	4.72	□□□□□ -1.65
LSM4	YER112W	GND2	P53319	492 aa		4.72	□□□□□ -1.65
LSM4	YER112W	NRG1	Q03125	231 aa		4.72	□□□□□ -1.65
LSM4	YER112W	HBT1	Q07653	1046 aa	Known RBP	4.72	□□□□□ -1.65
LSM4	YER112W	NDJ1	Q12366	352 aa		4.72	□□□□□ -1.65
LSM4	YER112W	CCR4	P31384	837 aa	Known RBP	4.71	□□□□□ -1.66
LSM4	YER112W	TYS1	P36421	394 aa	Known RBP	4.71	□□□□□ -1.66
LSM4	YER112W	MIP6	P38760	659 aa	Known RBP	4.71	□□□□□ -1.66
LSM4	YER112W	CKB2	P38930	258 aa		4.71	□□□□□ -1.66
LSM4	YER112W	ECM1	P39715	212 aa		4.71	□□□□□ -1.66
LSM4	YER112W	GPR1	Q12361	961 aa		4.71	□□□□□ -1.66
LSM4	YER112W	TRM13	Q12383	476 aa		4.71	□□□□□ -1.66
LSM4	YER112W	Q0142	Q9ZZW4	58 aa		4.71	□□□□□ -1.66
LSM4	YER112W	PRP4	P20053	465 aa	Known RBP	4.7	□□□□□ -1.66
LSM4	YER112W	PRP19	P32523	503 aa	Known RBP	4.7	□□□□□ -1.66
LSM4	YER112W	PRP31	P49704	494 aa	Predicted RBP	4.7	□□□□□ -1.66
LSM4	YER112W	HFD1	Q04458	532 aa		4.7	□□□□□ -1.66
LSM4	YER112W	FAP7	Q12055	197 aa	Predicted RBP	4.7	□□□□□ -1.66
LSM4	YER112W	SSD1	P24276	1250 aa	Known RBP RIP-Chip data	4.69	□□□□□ -1.66	not detected
LSM4	YER112W	TSR4	P25040	408 aa		4.69	□□□□□ -1.66
LSM4	YER112W	MAL31	P38156	614 aa		4.69	□□□□□ -1.66
LSM4	YER112W	TDA3	P38758	523 aa		4.69	□□□□□ -1.66
LSM4	YER112W	UBP12	P39538	1254 aa		4.69	□□□□□ -1.66
LSM4	YER112W	SDS3	P40505	327 aa		4.69	□□□□□ -1.66
LSM4	YER112W	RET2	P43621	546 aa		4.69	□□□□□ -1.66
LSM4	YER112W	DAS1	P47005	663 aa		4.69	□□□□□ -1.66
LSM4	YER112W	BFA1	P47113	574 aa		4.69	□□□□□ -1.66
LSM4	YER112W	YJR096W	P47137	282 aa		4.69	□□□□□ -1.66
LSM4	YER112W	AMA1	P50082	593 aa		4.69	□□□□□ -1.66
LSM4	YER112W	GPD1	Q00055	391 aa	Known RBP	4.69	□□□□□ -1.66
LSM4	YER112W	DLT1	Q04216	342 aa		4.69	□□□□□ -1.66
LSM4	YER112W	MCM21	Q06675	368 aa		4.69	□□□□□ -1.66
LSM4	YER112W	ATG11	Q12527	1178 aa		4.69	□□□□□ -1.66
LSM4	YER112W	APL2	P36000	726 aa	Predicted RBP	4.68	□□□□□ -1.66
LSM4	YER112W	YKR075C	P36155	307 aa		4.68	□□□□□ -1.66
LSM4	YER112W	YHL017W	P38745	532 aa		4.68	□□□□□ -1.66
LSM4	YER112W	FKH2	P41813	862 aa		4.68	□□□□□ -1.66
LSM4	YER112W	YGR153W	P48238	217 aa		4.68	□□□□□ -1.66
LSM4	YER112W	MTQ2	Q03920	221 aa	Predicted RBP	4.68	□□□□□ -1.66
LSM4	YER112W	GAD1	Q04792	585 aa		4.68	□□□□□ -1.66
LSM4	YER112W	ASM4	Q05166	528 aa		4.68	□□□□□ -1.66
LSM4	YER112W	FRE5	Q08908	694 aa		4.68	□□□□□ -1.66
LSM4	YER112W	CAF20	P12962	161 aa	Known RBP	4.67	□□□□□ -1.66
LSM4	YER112W	GRX4	P32642	244 aa		4.67	□□□□□ -1.66
LSM4	YER112W	ELO3	P40319	345 aa		4.67	□□□□□ -1.66
LSM4	YER112W	GZF3	P42944	551 aa	Known RBP	4.67	□□□□□ -1.66
LSM4	YER112W	YJR039W	P47107	1121 aa		4.67	□□□□□ -1.66
LSM4	YER112W	YTM1	Q12024	460 aa	Predicted RBP	4.67	□□□□□ -1.66
LSM4	YER112W	MSL5	Q12186	476 aa	Known RBP RIP-Chip data	4.67	□□□□□ -1.66	not detected
LSM4	YER112W	MNN4	P36044	1178 aa		4.66	□□□□□ -1.66
LSM4	YER112W	APN2	P38207	520 aa		4.66	□□□□□ -1.66
LSM4	YER112W	SSZ1	P38788	538 aa	Known RBP	4.66	□□□□□ -1.66

Retrieved 100 of 5,963 RNA–protein pairs in 13.7 ms