RNA–Protein interactions for RNA: YDR394W

RPT3, Transcript of ATPase of the 19S regulatory particle of the 26S proteasome, yeastyeast

Gene RPT3, Length 1,287 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPT3YDR394W COS5P47187 383 aa6.54□□□□□ -1.36
RPT3YDR394W NBP1P52919 319 aaPredicted RBP6.54□□□□□ -1.36
RPT3YDR394W LIF1P53150 421 aa6.54□□□□□ -1.36
RPT3YDR394W ENV11P53246 860 aa6.54□□□□□ -1.36
RPT3YDR394W RRB1Q04225 511 aaKnown RBP6.54□□□□□ -1.36
RPT3YDR394W POB3Q04636 552 aaKnown RBP6.54□□□□□ -1.36
RPT3YDR394W CUR1Q06469 252 aa6.54□□□□□ -1.36
RPT3YDR394W YPL277CQ08989 487 aa6.54□□□□□ -1.36
RPT3YDR394W ARP6Q12509 438 aa6.54□□□□□ -1.36
RPT3YDR394W SRD1P09007 221 aa6.53□□□□□ -1.36
RPT3YDR394W IDI1P15496 288 aa6.53□□□□□ -1.36
RPT3YDR394W HPR1P17629 752 aaKnown RBP6.53□□□□□ -1.36
RPT3YDR394W PRP22P24384 1145 aaKnown RBP6.53□□□□□ -1.36
RPT3YDR394W GIP1P38229 639 aa6.53□□□□□ -1.36
RPT3YDR394W SMF1P38925 575 aa6.53□□□□□ -1.36
RPT3YDR394W UBP5P39944 805 aa6.53□□□□□ -1.36
RPT3YDR394W GIR2Q03768 265 aaPredicted RBP6.53□□□□□ -1.36
RPT3YDR394W SOV1Q04748 898 aa6.53□□□□□ -1.36
RPT3YDR394W PHM6Q05637 104 aa6.53□□□□□ -1.36
RPT3YDR394W YDL057WQ07379 328 aa6.53□□□□□ -1.36
RPT3YDR394W GUD1Q07729 489 aa6.53□□□□□ -1.36
RPT3YDR394W YKL068W-AQ3E826 78 aa6.53□□□□□ -1.36
RPT3YDR394W TY1B-AO13527 1196 aaKnown RBP6.52□□□□□ -1.37
RPT3YDR394W CBP1P07252 654 aa6.52□□□□□ -1.37
RPT3YDR394W RAD18P10862 487 aa6.52□□□□□ -1.37
RPT3YDR394W TUP1P16649 713 aa6.52□□□□□ -1.37
RPT3YDR394W NIP100P33420 868 aa6.52□□□□□ -1.37
RPT3YDR394W NDT80P38830 627 aa6.52□□□□□ -1.37
RPT3YDR394W MAD1P40957 749 aa6.52□□□□□ -1.37
RPT3YDR394W FET4P40988 552 aa6.52□□□□□ -1.37
RPT3YDR394W GPD2P41911 440 aaKnown RBP6.52□□□□□ -1.37
RPT3YDR394W SGM1P47166 707 aa6.52□□□□□ -1.37
RPT3YDR394W BTN2P53286 410 aa6.52□□□□□ -1.37
RPT3YDR394W ALD6P54115 500 aaKnown RBP6.52□□□□□ -1.37
RPT3YDR394W YMR187CQ03236 431 aa6.52□□□□□ -1.37
RPT3YDR394W TSR1Q07381 788 aaKnown RBP6.52□□□□□ -1.37
RPT3YDR394W NOP6Q07623 225 aaKnown RBP6.52□□□□□ -1.37
RPT3YDR394W WHI4Q07655 649 aaKnown RBP6.52□□□□□ -1.37
RPT3YDR394W NUR1Q12066 484 aa6.52□□□□□ -1.37
RPT3YDR394W FAL1Q12099 399 aaKnown RBP6.52□□□□□ -1.37
RPT3YDR394W RMP1Q12530 201 aa6.52□□□□□ -1.37
RPT3YDR394W MYO1P08964 1928 aa6.52□□□□□ -1.37
RPT3YDR394W MRP10O75012 95 aa6.51□□□□□ -1.37
RPT3YDR394W PGK1P00560 416 aaKnown RBP6.51□□□□□ -1.37
RPT3YDR394W CDC8P00572 216 aa6.51□□□□□ -1.37
RPT3YDR394W TCP1P12612 559 aaKnown RBP6.51□□□□□ -1.37
RPT3YDR394W KRS1P15180 591 aaKnown RBP6.51□□□□□ -1.37
RPT3YDR394W YCK2P23292 546 aaKnown RBP6.51□□□□□ -1.37
RPT3YDR394W PER1P25625 357 aa6.51□□□□□ -1.37
RPT3YDR394W MUD2P36084 527 aaKnown RBP6.51□□□□□ -1.37
RPT3YDR394W TDA3P38758 523 aa6.51□□□□□ -1.37
RPT3YDR394W SKN7P38889 622 aa6.51□□□□□ -1.37
RPT3YDR394W ACA1P39970 489 aa6.51□□□□□ -1.37
RPT3YDR394W HXT8P40886 569 aa6.51□□□□□ -1.37
RPT3YDR394W CCT8P47079 568 aaKnown RBP6.51□□□□□ -1.37
RPT3YDR394W YGR021WP53212 290 aa6.51□□□□□ -1.37
RPT3YDR394W TOF1P53840 1238 aa6.51□□□□□ -1.37
RPT3YDR394W VTC3Q02725 835 aa6.51□□□□□ -1.37
RPT3YDR394W YML037CQ03703 340 aa6.51□□□□□ -1.37
RPT3YDR394W MLH2Q07980 695 aa6.51□□□□□ -1.37
RPT3YDR394W YDR215CQ12240 137 aa6.51□□□□□ -1.37
RPT3YDR394W CSR2Q12734 1121 aa6.51□□□□□ -1.37
RPT3YDR394W PHR1P05066 565 aaKnown RBP RIP-Chip data6.5□□□□□ -1.37not detected
RPT3YDR394W SWI6P09959 803 aa6.5□□□□□ -1.37
RPT3YDR394W PHO8P11491 566 aa6.5□□□□□ -1.37
RPT3YDR394W CLN3P13365 580 aa6.5□□□□□ -1.37
RPT3YDR394W DAL7P21826 554 aa6.5□□□□□ -1.37
RPT3YDR394W MSN1P22148 382 aa6.5□□□□□ -1.37
RPT3YDR394W NAR1P23503 491 aaKnown RBP6.5□□□□□ -1.37
RPT3YDR394W MSH1P25846 959 aa6.5□□□□□ -1.37
RPT3YDR394W SMC1P32908 1225 aa6.5□□□□□ -1.37
RPT3YDR394W XRS2P33301 854 aa6.5□□□□□ -1.37
RPT3YDR394W TGL1P34163 548 aa6.5□□□□□ -1.37
RPT3YDR394W JNM1P36224 373 aa6.5□□□□□ -1.37
RPT3YDR394W PGM2P37012 569 aaKnown RBP6.5□□□□□ -1.37
RPT3YDR394W UBP13P38187 747 aa6.5□□□□□ -1.37
RPT3YDR394W ALG14P38242 237 aa6.5□□□□□ -1.37
RPT3YDR394W RPN3P40016 523 aaKnown RBP6.5□□□□□ -1.37
RPT3YDR394W TAD1P53065 400 aa6.5□□□□□ -1.37
RPT3YDR394W ESBP6P53918 673 aa6.5□□□□□ -1.37
RPT3YDR394W RNT1Q02555 471 aa6.5□□□□□ -1.37
RPT3YDR394W VTI1Q04338 217 aa6.5□□□□□ -1.37
RPT3YDR394W YLR297WQ05899 129 aa6.5□□□□□ -1.37
RPT3YDR394W SPH1Q06160 661 aa6.5□□□□□ -1.37
RPT3YDR394W CSR1Q06705 408 aaKnown RBP6.5□□□□□ -1.37
RPT3YDR394W RLP24Q07915 199 aaKnown RBP6.5□□□□□ -1.37
RPT3YDR394W RPB10P22139 70 aa6.49□□□□□ -1.37
RPT3YDR394W PAP1P29468 568 aaKnown RBP6.49□□□□□ -1.37
RPT3YDR394W GCG1P32656 232 aaKnown RBP6.49□□□□□ -1.37
RPT3YDR394W SET5P38890 526 aaKnown RBP6.49□□□□□ -1.37
RPT3YDR394W YMR124WP39523 943 aaKnown RBP6.49□□□□□ -1.37
RPT3YDR394W BOL3P39724 118 aa6.49□□□□□ -1.37
RPT3YDR394W FIS1P40515 155 aa6.49□□□□□ -1.37
RPT3YDR394W MMM1P41800 426 aa6.49□□□□□ -1.37
RPT3YDR394W CWC22P53333 577 aaKnown RBP6.49□□□□□ -1.37
RPT3YDR394W DIP5P53388 608 aa6.49□□□□□ -1.37
RPT3YDR394W PTA1Q01329 785 aaPredicted RBP6.49□□□□□ -1.37
RPT3YDR394W YLR001CQ07895 862 aa6.49□□□□□ -1.37
RPT3YDR394W RRN6P32786 894 aa6.48□□□□□ -1.37
RPT3YDR394W YSC83P32792 385 aa6.48□□□□□ -1.37
Retrieved 100 of 5,963 RNA–protein pairs in 37.9 ms