RNA–Protein interactions for RNA: YDR146C

SWI5, Transcript of Transcription factor that recruits Mediator and Swi/Snf complexes, yeastyeast

Gene SWI5, Length 2,130 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SWI5YDR146C MNN4P36044 1178 aa2.36□□□□□ -2.03
SWI5YDR146C SSZ1P38788 538 aaKnown RBP2.36□□□□□ -2.03
SWI5YDR146C CRP1P38845 465 aaKnown RBP2.36□□□□□ -2.03
SWI5YDR146C YJR039WP47107 1121 aa2.36□□□□□ -2.03
SWI5YDR146C NPY1P53164 384 aa2.36□□□□□ -2.03
SWI5YDR146C BRE5P53741 515 aaKnown RBP2.36□□□□□ -2.03
SWI5YDR146C PKH1Q03407 766 aa2.36□□□□□ -2.03
SWI5YDR146C RPN7Q06103 429 aaKnown RBP2.36□□□□□ -2.03
SWI5YDR146C GUD1Q07729 489 aa2.36□□□□□ -2.03
SWI5YDR146C ADE2P21264 571 aaKnown RBP2.36□□□□□ -2.03
SWI5YDR146C SSD1P24276 1250 aaKnown RBP RIP-Chip data2.36□□□□□ -2.03not detected
SWI5YDR146C CAD1P24813 409 aaKnown RBP2.36□□□□□ -2.03
SWI5YDR146C HRR25P29295 494 aaKnown RBP2.36□□□□□ -2.03
SWI5YDR146C EFT1P32324 842 aaKnown RBP2.36□□□□□ -2.03
SWI5YDR146C TRM2P33753 639 aa2.36□□□□□ -2.03
SWI5YDR146C CHS7P38843 316 aa2.36□□□□□ -2.03
SWI5YDR146C YFL052WP43551 465 aa2.36□□□□□ -2.03
SWI5YDR146C PMT3P47190 753 aa2.36□□□□□ -2.03
SWI5YDR146C MTR3P48240 250 aaPredicted RBP2.36□□□□□ -2.03
SWI5YDR146C TEX1P53851 422 aaKnown RBP2.36□□□□□ -2.03
SWI5YDR146C ARG5,6Q01217 863 aa2.36□□□□□ -2.03
SWI5YDR146C KIN4Q01919 800 aa2.36□□□□□ -2.03
SWI5YDR146C UME1Q03010 460 aa2.36□□□□□ -2.03
SWI5YDR146C MTQ2Q03920 221 aaPredicted RBP2.36□□□□□ -2.03
SWI5YDR146C YLR040CQ07988 224 aa2.36□□□□□ -2.03
SWI5YDR146C TGL5Q12043 749 aa2.36□□□□□ -2.03
SWI5YDR146C APL2P36000 726 aaPredicted RBP2.35□□□□□ -2.03
SWI5YDR146C YBR259WP38338 688 aa2.35□□□□□ -2.03
SWI5YDR146C YHR112CP38716 378 aa2.35□□□□□ -2.03
SWI5YDR146C CKB2P38930 258 aa2.35□□□□□ -2.03
SWI5YDR146C CCT5P40413 562 aaKnown RBP2.35□□□□□ -2.03
SWI5YDR146C HOS4P40480 1083 aa2.35□□□□□ -2.03
SWI5YDR146C GPP1P41277 250 aaKnown RBP2.35□□□□□ -2.03
SWI5YDR146C BAP3P41815 604 aa2.35□□□□□ -2.03
SWI5YDR146C HLJ1P48353 224 aa2.35□□□□□ -2.03
SWI5YDR146C NRG1Q03125 231 aa2.35□□□□□ -2.03
SWI5YDR146C ERG4P25340 473 aa2.35□□□□□ -2.03
SWI5YDR146C NGG1P32494 702 aa2.35□□□□□ -2.03
SWI5YDR146C YPT7P32939 208 aa2.35□□□□□ -2.03
SWI5YDR146C YKL222CP35995 705 aa2.35□□□□□ -2.03
SWI5YDR146C TYS1P36421 394 aaKnown RBP2.35□□□□□ -2.03
SWI5YDR146C AKL1P38080 1108 aaKnown RBP2.35□□□□□ -2.03
SWI5YDR146C KTR4P38131 464 aa2.35□□□□□ -2.03
SWI5YDR146C BEM4P39011 633 aa2.35□□□□□ -2.03
SWI5YDR146C DOT6P40059 670 aaKnown RBP2.35□□□□□ -2.03
SWI5YDR146C ELO3P40319 345 aa2.35□□□□□ -2.03
SWI5YDR146C FKH2P41813 862 aa2.35□□□□□ -2.03
SWI5YDR146C RET2P43621 546 aa2.35□□□□□ -2.03
SWI5YDR146C PRP31P49704 494 aaPredicted RBP2.35□□□□□ -2.03
SWI5YDR146C SLI1P53304 468 aa2.35□□□□□ -2.03
SWI5YDR146C SUN4P53616 420 aa2.35□□□□□ -2.03
SWI5YDR146C MCM21Q06675 368 aa2.35□□□□□ -2.03
SWI5YDR146C PUS9Q12069 462 aa2.35□□□□□ -2.03
SWI5YDR146C ATG11Q12527 1178 aa2.35□□□□□ -2.03
SWI5YDR146C LAT1P12695 482 aaKnown RBP2.34□□□□□ -2.03
SWI5YDR146C LYS9P38999 446 aa2.34□□□□□ -2.03
SWI5YDR146C HXT6P39003 570 aaKnown RBP2.34□□□□□ -2.03
SWI5YDR146C HXT7P39004 570 aa2.34□□□□□ -2.03
SWI5YDR146C NUG1P40010 520 aaKnown RBP2.34□□□□□ -2.03
SWI5YDR146C GZF3P42944 551 aaKnown RBP2.34□□□□□ -2.03
SWI5YDR146C YGR237CP50089 785 aa2.34□□□□□ -2.03
SWI5YDR146C MUP1P50276 574 aa2.34□□□□□ -2.03
SWI5YDR146C ADY4Q05955 493 aa2.34□□□□□ -2.03
SWI5YDR146C APM4Q99186 491 aa2.34□□□□□ -2.03
SWI5YDR146C HRP1Q99383 534 aaKnown RBP2.34□□□□□ -2.03
SWI5YDR146C NUP145P49687 1317 aa2.34□□□□□ -2.04
SWI5YDR146C ERG6P25087 383 aaKnown RBP2.33□□□□□ -2.04
SWI5YDR146C PRP19P32523 503 aaKnown RBP2.33□□□□□ -2.04
SWI5YDR146C PAF1P38351 445 aa2.33□□□□□ -2.04
SWI5YDR146C OAF1P39720 1047 aaPredicted RBP2.33□□□□□ -2.04
SWI5YDR146C GET2P40056 285 aa2.33□□□□□ -2.04
SWI5YDR146C AIM21P40563 679 aa2.33□□□□□ -2.04
SWI5YDR146C MSE1P48525 536 aa2.33□□□□□ -2.04
SWI5YDR146C ECM9Q02202 377 aa2.33□□□□□ -2.04
SWI5YDR146C DLT1Q04216 342 aa2.33□□□□□ -2.04
SWI5YDR146C RGC1Q06108 1083 aaKnown RBP2.33□□□□□ -2.04
SWI5YDR146C TUB2P02557 457 aaKnown RBP2.33□□□□□ -2.04
SWI5YDR146C PPR1P07272 904 aaPredicted RBP2.33□□□□□ -2.04
SWI5YDR146C MET3P08536 511 aa2.33□□□□□ -2.04
SWI5YDR146C SWI6P09959 803 aa2.33□□□□□ -2.04
SWI5YDR146C SEC6P32844 805 aa2.33□□□□□ -2.04
SWI5YDR146C YIR042CP40586 236 aa2.33□□□□□ -2.04
SWI5YDR146C SET2P46995 733 aaKnown RBP2.33□□□□□ -2.04
SWI5YDR146C AMA1P50082 593 aa2.33□□□□□ -2.04
SWI5YDR146C ORC4P54791 529 aa2.33□□□□□ -2.04
SWI5YDR146C RNT1Q02555 471 aa2.33□□□□□ -2.04
SWI5YDR146C GSF2Q04697 403 aaKnown RBP2.33□□□□□ -2.04
SWI5YDR146C AIM39Q08223 395 aa2.33□□□□□ -2.04
SWI5YDR146C YOL073CQ08232 322 aa2.33□□□□□ -2.04
SWI5YDR146C FRE5Q08908 694 aa2.33□□□□□ -2.04
SWI5YDR146C HFI1Q12060 488 aa2.33□□□□□ -2.04
SWI5YDR146C SIR3P06701 978 aa2.32□□□□□ -2.04
SWI5YDR146C CAF20P12962 161 aaKnown RBP2.32□□□□□ -2.04
SWI5YDR146C IME1P21190 360 aa2.32□□□□□ -2.04
SWI5YDR146C MAL31P38156 614 aa2.32□□□□□ -2.04
SWI5YDR146C YEN1P40028 759 aa2.32□□□□□ -2.04
SWI5YDR146C MNN11P46985 422 aaKnown RBP2.32□□□□□ -2.04
SWI5YDR146C YJL163CP46996 555 aa2.32□□□□□ -2.04
SWI5YDR146C YBP2P53169 641 aa2.32□□□□□ -2.04
SWI5YDR146C YTM1Q12024 460 aaPredicted RBP2.32□□□□□ -2.04
Retrieved 100 of 5,963 RNA–protein pairs in 10.7 ms