RNA–Protein interactions for RNA: YDR086C

SSS1, Transcript of Subunit of the Sec61p translocation complex (Sec61p-Sss1p-Sbh1p), yeastyeast

Gene SSS1, Length 243 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SSS1YDR086C YJL049WP47048 450 aa2.42□□□□□ -2.02
SSS1YDR086C ZIP2P53061 704 aa2.42□□□□□ -2.02
SSS1YDR086C YBP2P53169 641 aa2.42□□□□□ -2.02
SSS1YDR086C TEX1P53851 422 aaKnown RBP2.42□□□□□ -2.02
SSS1YDR086C ASM4Q05166 528 aa2.42□□□□□ -2.02
SSS1YDR086C CLF1Q12309 687 aaPredicted RBP2.42□□□□□ -2.02
SSS1YDR086C GPR1Q12361 961 aa2.42□□□□□ -2.02
SSS1YDR086C YKL033W-AQ86ZR7 236 aa2.42□□□□□ -2.02
SSS1YDR086C YBR182C-AQ8TGU6 64 aa2.42□□□□□ -2.02
SSS1YDR086C DIF1O13577 133 aa2.41□□□□□ -2.02
SSS1YDR086C CIT1P00890 479 aa2.41□□□□□ -2.02
SSS1YDR086C MDM10P18409 493 aa2.41□□□□□ -2.02
SSS1YDR086C TMT1P32643 299 aa2.41□□□□□ -2.02
SSS1YDR086C TRZ1P36159 838 aaPredicted RBP2.41□□□□□ -2.02
SSS1YDR086C RLP7P40693 322 aaKnown RBP2.41□□□□□ -2.02
SSS1YDR086C SHR5P41912 237 aa2.41□□□□□ -2.02
SSS1YDR086C ALG2P43636 503 aa2.41□□□□□ -2.02
SSS1YDR086C CTR1P49573 406 aa2.41□□□□□ -2.02
SSS1YDR086C YGR125WP53273 1036 aa2.41□□□□□ -2.02
SSS1YDR086C SEC5P89102 971 aa2.41□□□□□ -2.02
SSS1YDR086C TAF8Q03750 510 aa2.41□□□□□ -2.02
SSS1YDR086C ORC2P32833 620 aa2.4□□□□□ -2.03
SSS1YDR086C APL2P36000 726 aaPredicted RBP2.4□□□□□ -2.03
SSS1YDR086C APT2P36973 181 aa2.4□□□□□ -2.03
SSS1YDR086C CCT7P42943 550 aaKnown RBP2.4□□□□□ -2.03
SSS1YDR086C PRP31P49704 494 aaPredicted RBP2.4□□□□□ -2.03
SSS1YDR086C MRK1P50873 501 aa2.4□□□□□ -2.03
SSS1YDR086C ATG4P53867 494 aa2.4□□□□□ -2.03
SSS1YDR086C CTK1Q03957 528 aaKnown RBP2.4□□□□□ -2.03
SSS1YDR086C THI7Q05998 598 aa2.4□□□□□ -2.03
SSS1YDR086C YAP7Q08182 245 aa2.4□□□□□ -2.03
SSS1YDR086C MET7Q08645 548 aa2.4□□□□□ -2.03
SSS1YDR086C CCR4P31384 837 aaKnown RBP2.39□□□□□ -2.03
SSS1YDR086C BET3P36149 193 aa2.39□□□□□ -2.03
SSS1YDR086C YHR020WP38708 688 aaKnown RBP2.39□□□□□ -2.03
SSS1YDR086C PAC2P39937 518 aa2.39□□□□□ -2.03
SSS1YDR086C HXT16P47185 567 aa2.39□□□□□ -2.03
SSS1YDR086C GLO1P50107 326 aa2.39□□□□□ -2.03
SSS1YDR086C MRI1Q06489 411 aaKnown RBP2.39□□□□□ -2.03
SSS1YDR086C MCM21Q06675 368 aa2.39□□□□□ -2.03
SSS1YDR086C PHR1P05066 565 aaKnown RBP RIP-Chip data2.38□□□□□ -2.03not detected
SSS1YDR086C VPS34P22543 875 aa2.38□□□□□ -2.03
SSS1YDR086C PER1P25625 357 aa2.38□□□□□ -2.03
SSS1YDR086C SPC29P33419 253 aa2.38□□□□□ -2.03
SSS1YDR086C NUP60P39705 539 aa2.38□□□□□ -2.03
SSS1YDR086C PAN2P53010 1115 aaPredicted RBP2.38□□□□□ -2.03
SSS1YDR086C FHN1P53279 174 aa2.38□□□□□ -2.03
SSS1YDR086C ORC4P54791 529 aa2.38□□□□□ -2.03
SSS1YDR086C ARG5,6Q01217 863 aa2.38□□□□□ -2.03
SSS1YDR086C SEG1Q04279 960 aa2.38□□□□□ -2.03
SSS1YDR086C SLK19Q08581 821 aaKnown RBP2.38□□□□□ -2.03
SSS1YDR086C FLC1Q08967 793 aa2.38□□□□□ -2.03
SSS1YDR086C HOM2P13663 365 aaKnown RBP2.37□□□□□ -2.03
SSS1YDR086C MVD1P32377 396 aaKnown RBP2.37□□□□□ -2.03
SSS1YDR086C EMP70P32802 667 aa2.37□□□□□ -2.03
SSS1YDR086C MUP3P38734 546 aa2.37□□□□□ -2.03
SSS1YDR086C FMO1P38866 432 aa2.37□□□□□ -2.03
SSS1YDR086C LTP1P40347 161 aa2.37□□□□□ -2.03
SSS1YDR086C ALY2P47029 1046 aa2.37□□□□□ -2.03
SSS1YDR086C UBC9P50623 157 aaPredicted RBP2.37□□□□□ -2.03
SSS1YDR086C RTA1P53047 317 aa2.37□□□□□ -2.03
SSS1YDR086C REC102Q02721 264 aa2.37□□□□□ -2.03
SSS1YDR086C CAN1P04817 590 aa2.36□□□□□ -2.03
SSS1YDR086C GAL11P19659 1081 aa2.36□□□□□ -2.03
SSS1YDR086C ADE2P21264 571 aaKnown RBP2.36□□□□□ -2.03
SSS1YDR086C PHO11P35842 467 aa2.36□□□□□ -2.03
SSS1YDR086C PHO12P38693 467 aa2.36□□□□□ -2.03
SSS1YDR086C SFB3P38810 929 aa2.36□□□□□ -2.03
SSS1YDR086C BNA2P47125 453 aa2.36□□□□□ -2.03
SSS1YDR086C MTL1P53214 551 aa2.36□□□□□ -2.03
SSS1YDR086C YDR338CQ05497 695 aa2.36□□□□□ -2.03
SSS1YDR086C KCC4P25389 1037 aa2.35□□□□□ -2.03
SSS1YDR086C FUB1P25659 250 aa2.35□□□□□ -2.03
SSS1YDR086C GMH1P36125 273 aa2.35□□□□□ -2.03
SSS1YDR086C UBS1P38290 277 aa2.35□□□□□ -2.03
SSS1YDR086C YHR112CP38716 378 aa2.35□□□□□ -2.03
SSS1YDR086C MIP6P38760 659 aaKnown RBP2.35□□□□□ -2.03
SSS1YDR086C LYS9P38999 446 aa2.35□□□□□ -2.03
SSS1YDR086C RSP5P39940 809 aaKnown RBP2.35□□□□□ -2.03
SSS1YDR086C TY4A-JP47023 414 aa2.35□□□□□ -2.03
SSS1YDR086C HUL5P53119 910 aa2.35□□□□□ -2.03
SSS1YDR086C RIM13Q03792 727 aa2.35□□□□□ -2.03
SSS1YDR086C HMO1Q03973 246 aaKnown RBP2.35□□□□□ -2.03
SSS1YDR086C ZRT2Q12436 422 aa2.35□□□□□ -2.03
SSS1YDR086C ABF1P14164 731 aa2.34□□□□□ -2.03
SSS1YDR086C PEX1P24004 1043 aa2.34□□□□□ -2.03
SSS1YDR086C CRP1P38845 465 aaKnown RBP2.34□□□□□ -2.03
SSS1YDR086C RPN10P38886 268 aaKnown RBP2.34□□□□□ -2.03
SSS1YDR086C HRB1P38922 454 aaKnown RBP RIP-Chip data2.34□□□□□ -2.03not detected
SSS1YDR086C GID8P40208 455 aa2.34□□□□□ -2.03
SSS1YDR086C YFL052WP43551 465 aa2.34□□□□□ -2.03
SSS1YDR086C BNA3P47039 444 aaKnown RBP2.34□□□□□ -2.03
SSS1YDR086C RGC1Q06108 1083 aaKnown RBP2.34□□□□□ -2.03
SSS1YDR086C BMS1Q08965 1183 aaKnown RBP2.34□□□□□ -2.03
SSS1YDR086C HRP1Q99383 534 aaKnown RBP2.34□□□□□ -2.03
SSS1YDR086C PGK1P00560 416 aaKnown RBP2.33□□□□□ -2.04
SSS1YDR086C THR1P17423 357 aaKnown RBP2.33□□□□□ -2.04
SSS1YDR086C PRP28P23394 588 aa2.33□□□□□ -2.04
SSS1YDR086C PTP1P25044 335 aa2.33□□□□□ -2.04
SSS1YDR086C MTC2P34246 357 aa2.33□□□□□ -2.04
Retrieved 100 of 5,963 RNA–protein pairs in 9.9 ms