RNA–Protein interactions for RNA: YDL020C

RPN4, Transcript of Transcription factor that stimulates expression of proteasome genes, yeast

Gene RPN4, Length 1,596 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RPN4	YDL020C	SLU7	Q02775	382 aa	Known RBP	4.95	□□□□□ -1.62
RPN4	YDL020C	PKH1	Q03407	766 aa		4.95	□□□□□ -1.62
RPN4	YDL020C	PEX19	Q07418	342 aa		4.95	□□□□□ -1.62
RPN4	YDL020C	NGG1	P32494	702 aa		4.95	□□□□□ -1.62
RPN4	YDL020C	MAL31	P38156	614 aa		4.95	□□□□□ -1.62
RPN4	YDL020C	SSZ1	P38788	538 aa	Known RBP	4.95	□□□□□ -1.62
RPN4	YDL020C	YJR039W	P47107	1121 aa		4.95	□□□□□ -1.62
RPN4	YDL020C	YLR415C	O13578	112 aa		4.94	□□□□□ -1.62
RPN4	YDL020C	AEP2	P22136	580 aa		4.94	□□□□□ -1.62
RPN4	YDL020C	RNQ1	P25367	405 aa		4.94	□□□□□ -1.62
RPN4	YDL020C	KAR4	P25583	335 aa		4.94	□□□□□ -1.62
RPN4	YDL020C	LST4	P34239	828 aa		4.94	□□□□□ -1.62
RPN4	YDL020C	ENP1	P38333	483 aa	Known RBP	4.94	□□□□□ -1.62
RPN4	YDL020C	HXT6	P39003	570 aa	Known RBP	4.94	□□□□□ -1.62
RPN4	YDL020C	HXT7	P39004	570 aa		4.94	□□□□□ -1.62
RPN4	YDL020C	BFA1	P47113	574 aa		4.94	□□□□□ -1.62
RPN4	YDL020C	YBP2	P53169	641 aa		4.94	□□□□□ -1.62
RPN4	YDL020C	BRE5	P53741	515 aa	Known RBP	4.94	□□□□□ -1.62
RPN4	YDL020C	GPD1	Q00055	391 aa	Known RBP	4.94	□□□□□ -1.62
RPN4	YDL020C	PRE10	P21242	288 aa	Known RBP RIP-Chip data	4.93	□□□□□ -1.62	not detected
RPN4	YDL020C	CAD1	P24813	409 aa	Known RBP	4.93	□□□□□ -1.62
RPN4	YDL020C	DAL3	P32459	195 aa		4.93	□□□□□ -1.62
RPN4	YDL020C	GPP2	P40106	250 aa	Known RBP	4.93	□□□□□ -1.62
RPN4	YDL020C	PEX14	P53112	341 aa		4.93	□□□□□ -1.62
RPN4	YDL020C	PEX8	P53248	589 aa		4.93	□□□□□ -1.62
RPN4	YDL020C	LEE1	Q02799	301 aa	Known RBP	4.93	□□□□□ -1.62
RPN4	YDL020C	YHM2	Q04013	314 aa		4.93	□□□□□ -1.62
RPN4	YDL020C	TMA10	Q06177	86 aa		4.93	□□□□□ -1.62
RPN4	YDL020C	RMP1	Q12530	201 aa		4.93	□□□□□ -1.62
RPN4	YDL020C	RPS21B	Q3E754	87 aa	Known RBP	4.93	□□□□□ -1.62
RPN4	YDL020C	RPS21A	P0C0V8	87 aa	Known RBP	4.92	□□□□□ -1.62
RPN4	YDL020C	YKR075C	P36155	307 aa		4.92	□□□□□ -1.62
RPN4	YDL020C	RPP1	P38786	293 aa		4.92	□□□□□ -1.62
RPN4	YDL020C	NIT2	P47016	307 aa		4.92	□□□□□ -1.62
RPN4	YDL020C	AVT1	P47082	602 aa		4.92	□□□□□ -1.62
RPN4	YDL020C	PRP31	P49704	494 aa	Predicted RBP	4.92	□□□□□ -1.62
RPN4	YDL020C	EXG2	P52911	562 aa		4.92	□□□□□ -1.62
RPN4	YDL020C	PTA1	Q01329	785 aa	Predicted RBP	4.92	□□□□□ -1.62
RPN4	YDL020C	TRM11	Q12463	433 aa		4.92	□□□□□ -1.62
RPN4	YDL020C	PLC1	P32383	869 aa		4.91	□□□□□ -1.62
RPN4	YDL020C	ELM1	P32801	640 aa		4.91	□□□□□ -1.62
RPN4	YDL020C	TFC4	P33339	1025 aa		4.91	□□□□□ -1.62
RPN4	YDL020C	THI80	P35202	319 aa		4.91	□□□□□ -1.62
RPN4	YDL020C	CTF13	P35203	478 aa		4.91	□□□□□ -1.62
RPN4	YDL020C	OAF3	P36023	863 aa		4.91	□□□□□ -1.62
RPN4	YDL020C	SIC1	P38634	284 aa		4.91	□□□□□ -1.62
RPN4	YDL020C	NUG1	P40010	520 aa	Known RBP	4.91	□□□□□ -1.62
RPN4	YDL020C	SET2	P46995	733 aa	Known RBP	4.91	□□□□□ -1.62
RPN4	YDL020C	HFI1	Q12060	488 aa		4.91	□□□□□ -1.62
RPN4	YDL020C	YLR358C	O13565	187 aa		4.91	□□□□□ -1.62
RPN4	YDL020C	STE11	P23561	717 aa		4.91	□□□□□ -1.62
RPN4	YDL020C	SEC65	P29478	273 aa		4.91	□□□□□ -1.62
RPN4	YDL020C	AKL1	P38080	1108 aa	Known RBP	4.91	□□□□□ -1.62
RPN4	YDL020C	YBR259W	P38338	688 aa		4.91	□□□□□ -1.62
RPN4	YDL020C	YHR202W	P38887	602 aa		4.91	□□□□□ -1.62
RPN4	YDL020C	BEM4	P39011	633 aa		4.91	□□□□□ -1.62
RPN4	YDL020C	NRG1	Q03125	231 aa		4.91	□□□□□ -1.62
RPN4	YDL020C	YOL057W	Q08225	711 aa		4.91	□□□□□ -1.62
RPN4	YDL020C	APM4	Q99186	491 aa		4.91	□□□□□ -1.62
RPN4	YDL020C	ADE2	P21264	571 aa	Known RBP	4.9	□□□□□ -1.63
RPN4	YDL020C	APN2	P38207	520 aa		4.9	□□□□□ -1.63
RPN4	YDL020C	MCM6	P53091	1017 aa	Known RBP	4.9	□□□□□ -1.63
RPN4	YDL020C	MRPS35	P53292	345 aa		4.9	□□□□□ -1.63
RPN4	YDL020C	SND1	Q04007	877 aa		4.9	□□□□□ -1.63
RPN4	YDL020C	ENB1	Q08299	606 aa		4.9	□□□□□ -1.63
RPN4	YDL020C	TMA7	Q3E764	64 aa	Known RBP	4.9	□□□□□ -1.63
RPN4	YDL020C	SWI6	P09959	803 aa		4.89	□□□□□ -1.63
RPN4	YDL020C	FAT1	P38225	669 aa		4.89	□□□□□ -1.63
RPN4	YDL020C	BIT2	P38346	545 aa		4.89	□□□□□ -1.63
RPN4	YDL020C	ECM1	P39715	212 aa		4.89	□□□□□ -1.63
RPN4	YDL020C	GID8	P40208	455 aa		4.89	□□□□□ -1.63
RPN4	YDL020C	MNN10	P50108	393 aa	Known RBP	4.89	□□□□□ -1.63
RPN4	YDL020C	ARG5,6	Q01217	863 aa		4.89	□□□□□ -1.63
RPN4	YDL020C	SKY1	Q03656	742 aa		4.89	□□□□□ -1.63
RPN4	YDL020C	YPR027C	Q12079	277 aa		4.89	□□□□□ -1.63
RPN4	YDL020C	LAS17	Q12446	633 aa		4.89	□□□□□ -1.63
RPN4	YDL020C	APL2	P36000	726 aa	Predicted RBP	4.88	□□□□□ -1.63
RPN4	YDL020C	IRC24	P40580	263 aa		4.88	□□□□□ -1.63
RPN4	YDL020C	ATG36	P46983	293 aa		4.88	□□□□□ -1.63
RPN4	YDL020C	SPC105	P53148	917 aa		4.88	□□□□□ -1.63
RPN4	YDL020C	YLR407W	Q06070	228 aa		4.88	□□□□□ -1.63
RPN4	YDL020C	TGL5	Q12043	749 aa		4.88	□□□□□ -1.63
RPN4	YDL020C	SER1	P33330	395 aa	Known RBP	4.87	□□□□□ -1.63
RPN4	YDL020C	APT2	P36973	181 aa		4.87	□□□□□ -1.63
RPN4	YDL020C	FKH2	P41813	862 aa		4.87	□□□□□ -1.63
RPN4	YDL020C	RTS3	P53289	263 aa		4.87	□□□□□ -1.63
RPN4	YDL020C	ERG5	P54781	538 aa		4.87	□□□□□ -1.63
RPN4	YDL020C	YMR210W	Q03649	449 aa		4.87	□□□□□ -1.63
RPN4	YDL020C	MCM21	Q06675	368 aa		4.87	□□□□□ -1.63
RPN4	YDL020C	ISA1	Q07821	250 aa	Predicted RBP	4.87	□□□□□ -1.63
RPN4	YDL020C	PYC1	P11154	1178 aa	Known RBP	4.87	□□□□□ -1.63
RPN4	YDL020C	KAR1	P11927	433 aa		4.87	□□□□□ -1.63
RPN4	YDL020C	PFK1	P16861	987 aa	Known RBP	4.87	□□□□□ -1.63
RPN4	YDL020C	COX11	P19516	300 aa	Known RBP	4.87	□□□□□ -1.63
RPN4	YDL020C	IMG2	P25642	146 aa	Predicted RBP	4.87	□□□□□ -1.63
RPN4	YDL020C	HEM12	P32347	362 aa	Predicted RBP	4.87	□□□□□ -1.63
RPN4	YDL020C	YKU70	P32807	602 aa		4.87	□□□□□ -1.63
RPN4	YDL020C	YHR112C	P38716	378 aa		4.87	□□□□□ -1.63
RPN4	YDL020C	NOP2	P40991	618 aa	Known RBP	4.87	□□□□□ -1.63
RPN4	YDL020C	NOP15	P53927	220 aa	Predicted RBP	4.87	□□□□□ -1.63

Retrieved 100 of 5,963 RNA–protein pairs in 9.8 ms