RNA–Protein interactions for RNA: YBR280C

SAF1, Transcript of F-Box protein involved in proteasome-dependent degradation of Aah1p, yeast

Gene SAF1, Length 1,914 nt, Biotype protein coding, Subcellular localisation Mitochondria .

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SAF1	YBR280C	BTT1	P40314	149 aa	Predicted RBP	4.96	□□□□□ -1.62
SAF1	YBR280C	THI6	P41835	540 aa		4.96	□□□□□ -1.62
SAF1	YBR280C	DAN4	P47179	1161 aa		4.96	□□□□□ -1.62
SAF1	YBR280C	HSH155	P49955	971 aa	Known RBP	4.96	□□□□□ -1.62
SAF1	YBR280C	CUE3	P53137	624 aa	Known RBP	4.96	□□□□□ -1.62
SAF1	YBR280C	PIL1	P53252	339 aa	Known RBP	4.96	□□□□□ -1.62
SAF1	YBR280C	SEC5	P89102	971 aa		4.96	□□□□□ -1.62
SAF1	YBR280C	YPL277C	Q08989	487 aa		4.96	□□□□□ -1.62
SAF1	YBR280C	SGT2	Q12118	346 aa	Known RBP	4.96	□□□□□ -1.62
SAF1	YBR280C	ACC1	Q00955	2233 aa	Known RBP	4.96	□□□□□ -1.62
SAF1	YBR280C	TPK1	P06244	397 aa		4.95	□□□□□ -1.62
SAF1	YBR280C	RNR2	P09938	399 aa	Known RBP	4.95	□□□□□ -1.62
SAF1	YBR280C	YEL1	P34225	687 aa		4.95	□□□□□ -1.62
SAF1	YBR280C	AGP2	P38090	596 aa		4.95	□□□□□ -1.62
SAF1	YBR280C	PRM6	Q04705	352 aa		4.95	□□□□□ -1.62
SAF1	YBR280C	BSP1	Q06604	576 aa		4.95	□□□□□ -1.62
SAF1	YBR280C	FOB1	O13329	566 aa		4.95	□□□□□ -1.62
SAF1	YBR280C	PHO8	P11491	566 aa		4.95	□□□□□ -1.62
SAF1	YBR280C	VMA1	P17255	1071 aa	Known RBP	4.95	□□□□□ -1.62
SAF1	YBR280C	GPI10	P30777	616 aa		4.95	□□□□□ -1.62
SAF1	YBR280C	YKR051W	P36142	418 aa		4.95	□□□□□ -1.62
SAF1	YBR280C	NPP2	P39997	493 aa		4.95	□□□□□ -1.62
SAF1	YBR280C	DAK2	P43550	591 aa		4.95	□□□□□ -1.62
SAF1	YBR280C	ALT1	P52893	592 aa		4.95	□□□□□ -1.62
SAF1	YBR280C	NMA2	P53204	395 aa		4.95	□□□□□ -1.62
SAF1	YBR280C	WAR1	Q03631	944 aa		4.95	□□□□□ -1.62
SAF1	YBR280C	NDJ1	Q12366	352 aa		4.95	□□□□□ -1.62
SAF1	YBR280C	DAL7	P21826	554 aa		4.94	□□□□□ -1.62
SAF1	YBR280C	MUD1	P32605	298 aa	Known RBP	4.94	□□□□□ -1.62
SAF1	YBR280C	SWE1	P32944	819 aa		4.94	□□□□□ -1.62
SAF1	YBR280C	TKL2	P33315	681 aa		4.94	□□□□□ -1.62
SAF1	YBR280C	TSA1	P34760	196 aa	Known RBP	4.94	□□□□□ -1.62
SAF1	YBR280C	SHE3	P38272	425 aa	Known RBP	4.94	□□□□□ -1.62
SAF1	YBR280C	GIP4	P39732	760 aa		4.94	□□□□□ -1.62
SAF1	YBR280C	YFL034W	P43564	1073 aa		4.94	□□□□□ -1.62
SAF1	YBR280C	GPM2	Q12008	311 aa		4.94	□□□□□ -1.62
SAF1	YBR280C	ELG1	Q12050	791 aa		4.94	□□□□□ -1.62
SAF1	YBR280C	HIS4	P00815	799 aa	Known RBP	4.93	□□□□□ -1.62
SAF1	YBR280C	RPL19A	P0CX82	189 aa	Known RBP	4.93	□□□□□ -1.62
SAF1	YBR280C	RPL19B	P0CX83	189 aa	Predicted RBP	4.93	□□□□□ -1.62
SAF1	YBR280C	RGP1	P16664	663 aa		4.93	□□□□□ -1.62
SAF1	YBR280C	PDC6	P26263	563 aa	Known RBP	4.93	□□□□□ -1.62
SAF1	YBR280C	GAC1	P28006	793 aa		4.93	□□□□□ -1.62
SAF1	YBR280C	URA1	P28272	314 aa	Predicted RBP	4.93	□□□□□ -1.62
SAF1	YBR280C	PSE1	P32337	1089 aa	Known RBP	4.93	□□□□□ -1.62
SAF1	YBR280C	STE5	P32917	917 aa		4.93	□□□□□ -1.62
SAF1	YBR280C	DOT6	P40059	670 aa	Known RBP	4.93	□□□□□ -1.62
SAF1	YBR280C	FAR11	P53917	953 aa		4.93	□□□□□ -1.62
SAF1	YBR280C	GCN5	Q03330	439 aa		4.93	□□□□□ -1.62
SAF1	YBR280C	GYL1	Q04322	720 aa		4.93	□□□□□ -1.62
SAF1	YBR280C	CPA2	P03965	1118 aa	Known RBP	4.93	□□□□□ -1.62
SAF1	YBR280C	PGI1	P12709	554 aa	Known RBP	4.93	□□□□□ -1.62
SAF1	YBR280C	CSE1	P33307	960 aa		4.93	□□□□□ -1.62
SAF1	YBR280C	TCD2	P36101	447 aa	Known RBP	4.93	□□□□□ -1.62
SAF1	YBR280C	NUP60	P39705	539 aa		4.93	□□□□□ -1.62
SAF1	YBR280C	RMD8	P43620	662 aa		4.93	□□□□□ -1.62
SAF1	YBR280C	COG8	Q04632	607 aa		4.93	□□□□□ -1.62
SAF1	YBR280C	TSR1	Q07381	788 aa	Known RBP	4.93	□□□□□ -1.62
SAF1	YBR280C	SAM3	Q08986	587 aa		4.93	□□□□□ -1.62
SAF1	YBR280C	YPR027C	Q12079	277 aa		4.93	□□□□□ -1.62
SAF1	YBR280C	CHS1	P08004	1131 aa		4.92	□□□□□ -1.62
SAF1	YBR280C	MET4	P32389	672 aa		4.92	□□□□□ -1.62
SAF1	YBR280C	PIN4	P34217	668 aa	Known RBP RIP-Chip data	4.92	□□□□□ -1.62	not detected
SAF1	YBR280C	DAS1	P47005	663 aa		4.92	□□□□□ -1.62
SAF1	YBR280C	NBP1	P52919	319 aa	Predicted RBP	4.92	□□□□□ -1.62
SAF1	YBR280C	SCY1	P53009	804 aa		4.92	□□□□□ -1.62
SAF1	YBR280C	CEG1	Q01159	459 aa	Predicted RBP	4.92	□□□□□ -1.62
SAF1	YBR280C	FLC1	Q08967	793 aa		4.92	□□□□□ -1.62
SAF1	YBR280C	NAT1	P12945	854 aa	Known RBP	4.91	□□□□□ -1.62
SAF1	YBR280C	FRE1	P32791	686 aa		4.91	□□□□□ -1.62
SAF1	YBR280C	PTC3	P34221	468 aa	Known RBP	4.91	□□□□□ -1.62
SAF1	YBR280C	KDX1	P36005	433 aa		4.91	□□□□□ -1.62
SAF1	YBR280C	TTI1	P36097	1038 aa		4.91	□□□□□ -1.62
SAF1	YBR280C	GIP1	P38229	639 aa		4.91	□□□□□ -1.62
SAF1	YBR280C	TIF5	P38431	405 aa	Known RBP	4.91	□□□□□ -1.62
SAF1	YBR280C	YPT35	P38815	214 aa	Known RBP	4.91	□□□□□ -1.62
SAF1	YBR280C	FAA3	P39002	694 aa		4.91	□□□□□ -1.62
SAF1	YBR280C	PCF11	P39081	626 aa	Predicted RBP	4.91	□□□□□ -1.62
SAF1	YBR280C	FTR1	P40088	404 aa		4.91	□□□□□ -1.62
SAF1	YBR280C	YIL161W	P40449	235 aa	Known RBP	4.91	□□□□□ -1.62
SAF1	YBR280C	SHQ1	P40486	507 aa	Predicted RBP	4.91	□□□□□ -1.62
SAF1	YBR280C	VPS70	P47161	811 aa		4.91	□□□□□ -1.62
SAF1	YBR280C	YNL011C	P53980	444 aa		4.91	□□□□□ -1.62
SAF1	YBR280C	SEG1	Q04279	960 aa		4.91	□□□□□ -1.62
SAF1	YBR280C	JIP5	Q06214	492 aa	Predicted RBP	4.91	□□□□□ -1.62
SAF1	YBR280C	EAF1	Q06337	982 aa		4.91	□□□□□ -1.62
SAF1	YBR280C	PSR2	Q07949	397 aa		4.91	□□□□□ -1.62
SAF1	YBR280C	YPL150W	Q12152	901 aa		4.91	□□□□□ -1.62
SAF1	YBR280C	GGA2	P38817	585 aa	Known RBP	4.91	□□□□□ -1.62
SAF1	YBR280C	SNF7	P39929	240 aa	Known RBP	4.91	□□□□□ -1.62
SAF1	YBR280C	SMC3	P47037	1230 aa		4.91	□□□□□ -1.62
SAF1	YBR280C	MUB1	Q03162	620 aa		4.91	□□□□□ -1.62
SAF1	YBR280C	IRA1	P18963	3092 aa		4.91	□□□□□ -1.62
SAF1	YBR280C	KIN3	P22209	435 aa		4.9	□□□□□ -1.62
SAF1	YBR280C	TRK2	P28584	889 aa		4.9	□□□□□ -1.62
SAF1	YBR280C	DAL1	P32375	460 aa		4.9	□□□□□ -1.62
SAF1	YBR280C	MAL33	P38157	468 aa		4.9	□□□□□ -1.62
SAF1	YBR280C	PPX1	P38698	397 aa		4.9	□□□□□ -1.62
SAF1	YBR280C	AVT2	P39981	480 aa		4.9	□□□□□ -1.62
SAF1	YBR280C	KAP123	P40069	1113 aa	Known RBP	4.9	□□□□□ -1.62

Retrieved 100 of 5,963 RNA–protein pairs in 25 ms