RNA–Protein interactions for RNA: ENST00000640640.1

SCARB2-223, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5 BASIC

Gene SCARB2, Length 4,608 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-223ENST00000640640 CDC42BPAQ5VT25 1732 aa20.32■□□□□ 0.84
SCARB2-223ENST00000640640 ZFYVE27Q5T4F4 411 aa20.32■□□□□ 0.84
SCARB2-223ENST00000640640 CCDC102BQ68D86 513 aa20.32■□□□□ 0.84
SCARB2-223ENST00000640640 DBNDD2Q9BQY9 259 aa20.32■□□□□ 0.84
SCARB2-223ENST00000640640 USP44Q9H0E7 712 aa20.32■□□□□ 0.84
SCARB2-223ENST00000640640 AOX1Q06278 1338 aa20.32■□□□□ 0.84
SCARB2-223ENST00000640640 KIF24Q5T7B8 1368 aa20.32■□□□□ 0.84
SCARB2-223ENST00000640640 EFCAB6Q5THR3 1501 aa20.32■□□□□ 0.84
SCARB2-223ENST00000640640 SGSM2O43147 1006 aa20.32■□□□□ 0.84
SCARB2-223ENST00000640640 SUCLG2Q96I99 432 aa20.32■□□□□ 0.84
SCARB2-223ENST00000640640 KIF2AO00139 706 aaPredicted RBP20.31■□□□□ 0.84
SCARB2-223ENST00000640640 A1BGP04217 495 aa20.31■□□□□ 0.84
SCARB2-223ENST00000640640 KAT14Q9H8E8 782 aa20.31■□□□□ 0.84
SCARB2-223ENST00000640640 STX8Q9UNK0 236 aa20.31■□□□□ 0.84
SCARB2-223ENST00000640640 SYT1P21579 422 aa20.31■□□□□ 0.84
SCARB2-223ENST00000640640 CCDC96Q2M329 555 aa20.31■□□□□ 0.84
SCARB2-223ENST00000640640 TNNI3KQ59H18 835 aa20.31■□□□□ 0.84
SCARB2-223ENST00000640640 FPGT-TNNI3KV9GXZ4 949 aa20.31■□□□□ 0.84
SCARB2-223ENST00000640640 ERCC6L2Q5T890 1561 aa20.31■□□□□ 0.84
SCARB2-223ENST00000640640 GCKRQ14397 625 aa20.31■□□□□ 0.84
SCARB2-223ENST00000640640 CCDC191Q8NCU4 936 aa20.31■□□□□ 0.84
SCARB2-223ENST00000640640 A0A1B0GUL7 405 aa20.31■□□□□ 0.84
SCARB2-223ENST00000640640 SYCP1Q15431 976 aa20.31■□□□□ 0.84
SCARB2-223ENST00000640640 SLC4A8Q2Y0W8 1093 aa20.31■□□□□ 0.84
SCARB2-223ENST00000640640 NAA16Q6N069 864 aaPredicted RBP20.3■□□□□ 0.84
SCARB2-223ENST00000640640 KCNG4Q8TDN1 519 aa20.3■□□□□ 0.84
SCARB2-223ENST00000640640 DDX17Q92841 729 aaKnown RBP20.3■□□□□ 0.84
SCARB2-223ENST00000640640 RAB34Q9BZG1 259 aa20.3■□□□□ 0.84
SCARB2-223ENST00000640640 RTL1A6NKG5 1358 aa20.3■□□□□ 0.84
SCARB2-223ENST00000640640 PRIM1P49642 420 aaKnown RBP20.3■□□□□ 0.84
SCARB2-223ENST00000640640 APOBRQ0VD83 1088 aa20.3■□□□□ 0.84
SCARB2-223ENST00000640640 ISM2Q6H9L7 571 aa20.3■□□□□ 0.84
SCARB2-223ENST00000640640 KIF1BO60333 1816 aa20.29■□□□□ 0.84
SCARB2-223ENST00000640640 RTN1Q16799 776 aa20.29■□□□□ 0.84
SCARB2-223ENST00000640640 KCNQ3O43525 872 aa20.29■□□□□ 0.84
SCARB2-223ENST00000640640 GIGYF1O75420 1035 aaPredicted RBP20.29■□□□□ 0.84
SCARB2-223ENST00000640640 SYKP43405 635 aa20.29■□□□□ 0.84
SCARB2-223ENST00000640640 CDR1P51861 262 aa20.29■□□□□ 0.84
SCARB2-223ENST00000640640 UBAP1LF5GYI3 381 aa20.28■□□□□ 0.84
SCARB2-223ENST00000640640 TXLNBQ8N3L3 684 aa20.28■□□□□ 0.84
SCARB2-223ENST00000640640 FAM200AQ8TCP9 573 aa20.28■□□□□ 0.84
SCARB2-223ENST00000640640 ATP7BP35670 1465 aa20.28■□□□□ 0.84
SCARB2-223ENST00000640640 KIF18AQ8NI77 898 aa20.28■□□□□ 0.84
SCARB2-223ENST00000640640 MRPS27Q92552 414 aaKnown RBP20.28■□□□□ 0.84
SCARB2-223ENST00000640640 C8orf37Q96NL8 207 aa20.28■□□□□ 0.84
SCARB2-223ENST00000640640 ZSCAN12O43309 604 aa20.28■□□□□ 0.84
SCARB2-223ENST00000640640 NEMFO60524 1076 aa20.28■□□□□ 0.84
SCARB2-223ENST00000640640 UBXN4Q92575 508 aa20.28■□□□□ 0.84
SCARB2-223ENST00000640640 CCDC12Q8WUD4 166 aaPredicted RBP20.27■□□□□ 0.84
SCARB2-223ENST00000640640 VAT1LQ9HCJ6 419 aa20.27■□□□□ 0.84
SCARB2-223ENST00000640640 UBA7P41226 1012 aa20.27■□□□□ 0.84
SCARB2-223ENST00000640640 FAM227BQ96M60 508 aa20.27■□□□□ 0.84
SCARB2-223ENST00000640640 ZNF219Q9P2Y4 722 aaPredicted RBP20.27■□□□□ 0.84
SCARB2-223ENST00000640640 IFIT1BQ5T764 474 aaKnown RBP20.27■□□□□ 0.84
SCARB2-223ENST00000640640 SSH3Q8TE77 659 aa20.27■□□□□ 0.84
SCARB2-223ENST00000640640 TMEM266Q2M3C6 531 aa20.26■□□□□ 0.83
SCARB2-223ENST00000640640 SNX14Q9Y5W7 946 aa20.26■□□□□ 0.83
SCARB2-223ENST00000640640 PLEKHG1Q9ULL1 1385 aa20.26■□□□□ 0.83
SCARB2-223ENST00000640640 PTPDC1A2A3K4 754 aa20.26■□□□□ 0.83
SCARB2-223ENST00000640640 GSDMDP57764 484 aa20.26■□□□□ 0.83
SCARB2-223ENST00000640640 CCDC181Q5TID7 509 aa20.26■□□□□ 0.83
SCARB2-223ENST00000640640 TPTE2Q6XPS3 522 aa20.26■□□□□ 0.83
SCARB2-223ENST00000640640 TCP11L1Q9NUJ3 509 aa20.26■□□□□ 0.83
SCARB2-223ENST00000640640 TMEM132AQ24JP5 1023 aa20.26■□□□□ 0.83
SCARB2-223ENST00000640640 C16orf45Q96MC5 204 aaPredicted RBP20.26■□□□□ 0.83
SCARB2-223ENST00000640640 HECW2Q9P2P5 1572 aa20.26■□□□□ 0.83
SCARB2-223ENST00000640640 GSPT1P15170 499 aaKnown RBP20.26■□□□□ 0.83
SCARB2-223ENST00000640640 HELLSQ9NRZ9 838 aa20.26■□□□□ 0.83
SCARB2-223ENST00000640640 ROBO2Q9HCK4 1378 aa20.26■□□□□ 0.83
SCARB2-223ENST00000640640 ANO6Q4KMQ2 910 aa20.25■□□□□ 0.83
SCARB2-223ENST00000640640 KANK3Q6NY19 840 aa20.25■□□□□ 0.83
SCARB2-223ENST00000640640 TRMT1Q9NXH9 659 aaKnown RBP20.25■□□□□ 0.83
SCARB2-223ENST00000640640 CCDC129Q6ZRS4 1044 aa20.25■□□□□ 0.83
SCARB2-223ENST00000640640 TMC6Q7Z403 805 aa20.25■□□□□ 0.83
SCARB2-223ENST00000640640 KIAA1328Q86T90 577 aa20.25■□□□□ 0.83
SCARB2-223ENST00000640640 MAGEB6Q8N7X4 407 aa20.25■□□□□ 0.83
SCARB2-223ENST00000640640 ZNF594Q96JF6 807 aaPredicted RBP20.25■□□□□ 0.83
SCARB2-223ENST00000640640 PRR36Q9H6K5 1346 aa20.25■□□□□ 0.83
SCARB2-223ENST00000640640 SH3TC1Q8TE82 1336 aa20.24■□□□□ 0.83
SCARB2-223ENST00000640640 TNNT1P13805 278 aa20.24■□□□□ 0.83
SCARB2-223ENST00000640640 GNAT2P19087 354 aa20.24■□□□□ 0.83
SCARB2-223ENST00000640640 MIGA1Q8NAN2 632 aa20.24■□□□□ 0.83
SCARB2-223ENST00000640640 GSTO1P78417 241 aa20.24■□□□□ 0.83
SCARB2-223ENST00000640640 PDCL3Q9H2J4 239 aa20.24■□□□□ 0.83
SCARB2-223ENST00000640640 TET3O43151 1660 aa20.24■□□□□ 0.83
SCARB2-223ENST00000640640 SHROOM2Q13796 1616 aa20.24■□□□□ 0.83
SCARB2-223ENST00000640640 SLC27A2O14975 620 aa20.24■□□□□ 0.83
SCARB2-223ENST00000640640 MARCKSP29966 332 aaPredicted RBP20.24■□□□□ 0.83
SCARB2-223ENST00000640640 IQGAP3Q86VI3 1631 aa20.24■□□□□ 0.83
SCARB2-223ENST00000640640 ADCY10Q96PN6 1610 aa20.23■□□□□ 0.83
SCARB2-223ENST00000640640 ITGA6P23229 1130 aa20.23■□□□□ 0.83
SCARB2-223ENST00000640640 ST5P78524 1137 aa20.23■□□□□ 0.83
SCARB2-223ENST00000640640 ZNF397Q8NF99 534 aaPredicted RBP20.23■□□□□ 0.83
SCARB2-223ENST00000640640 ERLIN1O75477 346 aa20.23■□□□□ 0.83
SCARB2-223ENST00000640640 DNAJC10Q8IXB1 793 aa20.23■□□□□ 0.83
SCARB2-223ENST00000640640 CPLX3Q8WVH0 158 aa20.23■□□□□ 0.83
SCARB2-223ENST00000640640 CLASP1Q7Z460 1538 aa20.23■□□□□ 0.83
SCARB2-223ENST00000640640 MAGEB6P1A0A0J9YX57 407 aa20.23■□□□□ 0.83
SCARB2-223ENST00000640640 SPTLC2O15270 562 aa20.23■□□□□ 0.83
SCARB2-223ENST00000640640 RPS6KB1P23443 525 aa20.23■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms