RNA–Protein interactions for RNA: ENST00000638799.1

RTTN-213, Transcript of rotatin, humanhuman

TSL 5

Gene RTTN, Length 3,943 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTTN-213ENST00000638799 PDE8AO60658 829 aa8.87□□□□□ -0.99
RTTN-213ENST00000638799 COL9A3Q14050 684 aaPredicted RBP8.87□□□□□ -0.99
RTTN-213ENST00000638799 PRPF40BQ6NWY9 871 aaKnown RBP8.87□□□□□ -0.99
RTTN-213ENST00000638799 RIPOR2Q9Y4F9 1068 aa8.87□□□□□ -0.99
RTTN-213ENST00000638799 CCDC171Q6TFL3 1326 aa8.87□□□□□ -0.99
RTTN-213ENST00000638799 RIC1Q4ADV7 1423 aa8.87□□□□□ -0.99
RTTN-213ENST00000638799 GOLIM4O00461 696 aa8.87□□□□□ -0.99
RTTN-213ENST00000638799 LDHAL6AQ6ZMR3 332 aa8.87□□□□□ -0.99
RTTN-213ENST00000638799 NIP7Q9Y221 180 aaKnown RBP eCLIP8.87□□□□□ -0.99
RTTN-213ENST00000638799 BTAF1O14981 1849 aa8.87□□□□□ -0.99
RTTN-213ENST00000638799 ADCK5Q3MIX3 580 aa8.86□□□□□ -0.99
RTTN-213ENST00000638799 CCDC129Q6ZRS4 1044 aa8.86□□□□□ -0.99
RTTN-213ENST00000638799 ZHX1Q9UKY1 873 aaPredicted RBP8.86□□□□□ -0.99
RTTN-213ENST00000638799 MED23Q9ULK4 1368 aa8.86□□□□□ -0.99
RTTN-213ENST00000638799 ANKRD18BA2A2Z9 1011 aa8.86□□□□□ -0.99
RTTN-213ENST00000638799 MAPK8IP2Q13387 824 aaPredicted RBP8.86□□□□□ -0.99
RTTN-213ENST00000638799 AMIGO3Q86WK7 504 aa8.86□□□□□ -0.99
RTTN-213ENST00000638799 TNPO1Q92973 898 aaKnown RBP8.86□□□□□ -0.99
RTTN-213ENST00000638799 XAGE2Q96GT9 111 aa8.86□□□□□ -0.99
RTTN-213ENST00000638799 TMX3Q96JJ7 454 aa8.86□□□□□ -0.99
RTTN-213ENST00000638799 TAF6LQ9Y6J9 622 aa8.86□□□□□ -0.99
RTTN-213ENST00000638799 SH3TC1Q8TE82 1336 aa8.86□□□□□ -0.99
RTTN-213ENST00000638799 HIP1O00291 1037 aa8.86□□□□□ -0.99
RTTN-213ENST00000638799 SCARF1Q14162 830 aa8.86□□□□□ -0.99
RTTN-213ENST00000638799 NECTIN1Q15223 517 aa8.86□□□□□ -0.99
RTTN-213ENST00000638799 MAP4K1Q92918 833 aa8.86□□□□□ -0.99
RTTN-213ENST00000638799 LARP6Q9BRS8 491 aaKnown RBP8.86□□□□□ -0.99
RTTN-213ENST00000638799 UTP14AQ9BVJ6 771 aaKnown RBP8.86□□□□□ -0.99
RTTN-213ENST00000638799 SEC31BQ9NQW1 1179 aa8.86□□□□□ -0.99
RTTN-213ENST00000638799 SNRKQ9NRH2 765 aa8.86□□□□□ -0.99
RTTN-213ENST00000638799 PAG1Q9NWQ8 432 aa8.86□□□□□ -0.99
RTTN-213ENST00000638799 RBM8AQ9Y5S9 174 aaKnown RBP8.86□□□□□ -0.99
RTTN-213ENST00000638799 NTSR2O95665 410 aa8.86□□□□□ -0.99
RTTN-213ENST00000638799 PKP1Q13835 747 aa8.86□□□□□ -0.99
RTTN-213ENST00000638799 METTL24Q5JXM2 366 aa8.86□□□□□ -0.99
RTTN-213ENST00000638799 CNNM1Q9NRU3 951 aa8.86□□□□□ -0.99
RTTN-213ENST00000638799 IFIT1P09914 478 aaKnown RBP8.85□□□□□ -0.99
RTTN-213ENST00000638799 MRE11P49959 708 aa8.85□□□□□ -0.99
RTTN-213ENST00000638799 RAB3GAP1Q15042 981 aa8.85□□□□□ -0.99
RTTN-213ENST00000638799 PI16Q6UXB8 463 aa8.85□□□□□ -0.99
RTTN-213ENST00000638799 KBTBD3Q8NAB2 608 aa8.85□□□□□ -0.99
RTTN-213ENST00000638799 HELBQ8NG08 1087 aaPredicted RBP8.85□□□□□ -0.99
RTTN-213ENST00000638799 FBXO3Q9UK99 471 aa8.85□□□□□ -0.99
RTTN-213ENST00000638799 SSFA2P28290 1259 aa8.85□□□□□ -0.99
RTTN-213ENST00000638799 VGLL2Q8N8G2 317 aa8.85□□□□□ -0.99
RTTN-213ENST00000638799 CIZ1Q9ULV3 898 aaPredicted RBP8.85□□□□□ -0.99
RTTN-213ENST00000638799 SNAP23O00161 211 aa8.85□□□□□ -0.99
RTTN-213ENST00000638799 TAF5LO75529 589 aa8.85□□□□□ -0.99
RTTN-213ENST00000638799 MCM4P33991 863 aa8.85□□□□□ -0.99
RTTN-213ENST00000638799 CREB3L3Q68CJ9 461 aa8.85□□□□□ -0.99
RTTN-213ENST00000638799 GBP4Q96PP9 640 aa8.85□□□□□ -0.99
RTTN-213ENST00000638799 DDX60Q8IY21 1712 aaKnown RBP8.85□□□□□ -0.99
RTTN-213ENST00000638799 COL4A1P02462 1669 aa8.84□□□□□ -0.99
RTTN-213ENST00000638799 ZNF831Q5JPB2 1677 aa8.84□□□□□ -0.99
RTTN-213ENST00000638799 CASTP20810 708 aaKnown RBP8.84□□□□□ -0.99
RTTN-213ENST00000638799 FKBP4Q02790 459 aaKnown RBP eCLIP8.84□□□□□ -0.99
RTTN-213ENST00000638799 ATP2B3Q16720 1220 aa8.84□□□□□ -0.99
RTTN-213ENST00000638799 BICDL1Q6ZP65 573 aa8.84□□□□□ -0.99
RTTN-213ENST00000638799 SEPT12Q8IYM1 358 aa8.84□□□□□ -0.99
RTTN-213ENST00000638799 TTC14Q96N46 770 aa8.84□□□□□ -0.99
RTTN-213ENST00000638799 BCL2L12Q9HB09 334 aa8.84□□□□□ -0.99
RTTN-213ENST00000638799 SRP68Q9UHB9 627 aaKnown RBP8.84□□□□□ -0.99
RTTN-213ENST00000638799 AKAP2Q9Y2D5 859 aa8.84□□□□□ -0.99
RTTN-213ENST00000638799 NHSQ6T4R5 1651 aa8.84□□□□□ -0.99
RTTN-213ENST00000638799 XRCC6P12956 609 aaKnown RBP eCLIP8.84□□□□□ -0.99
RTTN-213ENST00000638799 GORABQ5T7V8 394 aa8.84□□□□□ -0.99
RTTN-213ENST00000638799 C3orf67Q6ZVT6 689 aa8.84□□□□□ -0.99
RTTN-213ENST00000638799 KCNB2Q92953 911 aa8.84□□□□□ -0.99
RTTN-213ENST00000638799 BCORQ6W2J9 1755 aa8.84□□□□□ -0.99
RTTN-213ENST00000638799 SLC27A2O14975 620 aa8.84□□□□□ -0.99
RTTN-213ENST00000638799 KCNJ4P48050 445 aa8.84□□□□□ -0.99
RTTN-213ENST00000638799 PARP10Q53GL7 1025 aa8.84□□□□□ -0.99
RTTN-213ENST00000638799 TTC39AQ5SRH9 613 aa8.84□□□□□ -0.99
RTTN-213ENST00000638799 JAKMIP1Q96N16 626 aaKnown RBP8.84□□□□□ -0.99
RTTN-213ENST00000638799 CCNL1Q9UK58 526 aaPredicted RBP8.84□□□□□ -0.99
RTTN-213ENST00000638799 CNTNAP4Q9C0A0 1308 aa8.83□□□□□ -1
RTTN-213ENST00000638799 ATRNO75882 1429 aa8.83□□□□□ -1
RTTN-213ENST00000638799 ONECUT3O60422 494 aaPredicted RBP8.83□□□□□ -1
RTTN-213ENST00000638799 AK2P54819 239 aa8.83□□□□□ -1
RTTN-213ENST00000638799 CCDC158Q5M9N0 1113 aa8.83□□□□□ -1
RTTN-213ENST00000638799 GNPATO15228 680 aa8.83□□□□□ -1
RTTN-213ENST00000638799 ERFEQ4G0M1 354 aa8.83□□□□□ -1
RTTN-213ENST00000638799 TBC1D9BQ66K14 1250 aa8.83□□□□□ -1
RTTN-213ENST00000638799 DDX49Q9Y6V7 483 aaKnown RBP8.83□□□□□ -1
RTTN-213ENST00000638799 DTNBO60941 627 aa8.83□□□□□ -1
RTTN-213ENST00000638799 PDE8BO95263 885 aa8.83□□□□□ -1
RTTN-213ENST00000638799 PDIA4P13667 645 aaKnown RBP8.83□□□□□ -1
RTTN-213ENST00000638799 ZAP70P43403 619 aa8.83□□□□□ -1
RTTN-213ENST00000638799 VPS53Q5VIR6 699 aa8.83□□□□□ -1
RTTN-213ENST00000638799 USPL1Q5W0Q7 1092 aa8.83□□□□□ -1
RTTN-213ENST00000638799 RUFY3Q7L099 469 aa8.83□□□□□ -1
RTTN-213ENST00000638799 SBF2Q86WG5 1849 aa8.83□□□□□ -1
RTTN-213ENST00000638799 CUL4AQ13619 759 aa8.82□□□□□ -1
RTTN-213ENST00000638799 MCMDC2Q4G0Z9 681 aa8.82□□□□□ -1
RTTN-213ENST00000638799 AK7Q96M32 723 aa8.82□□□□□ -1
RTTN-213ENST00000638799 QTRT2Q9H974 415 aaKnown RBP8.82□□□□□ -1
RTTN-213ENST00000638799 GRPEL1Q9HAV7 217 aa8.82□□□□□ -1
RTTN-213ENST00000638799 TRPC5Q9UL62 973 aaPredicted RBP8.82□□□□□ -1
RTTN-213ENST00000638799 ZDHHC9Q9Y397 364 aa8.82□□□□□ -1
RTTN-213ENST00000638799 RFX7Q2KHR2 1363 aa8.82□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms