RNA–Protein interactions for RNA: ENST00000638346.1

PAX6-234, Transcript of paired box 6, humanhuman

TSL 5

Gene PAX6, Length 1,863 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAX6-234ENST00000638346 CCDC171Q6TFL3 1326 aa13.84□□□□□ -0.19
PAX6-234ENST00000638346 CCDC158Q5M9N0 1113 aa13.84□□□□□ -0.19
PAX6-234ENST00000638346 LDHAL6AQ6ZMR3 332 aa13.84□□□□□ -0.19
PAX6-234ENST00000638346 SPRYD3Q8NCJ5 442 aa13.84□□□□□ -0.19
PAX6-234ENST00000638346 BCORQ6W2J9 1755 aa13.84□□□□□ -0.19
PAX6-234ENST00000638346 ZKSCAN1P17029 563 aaPredicted RBP13.83□□□□□ -0.2
PAX6-234ENST00000638346 KBTBD3Q8NAB2 608 aa13.83□□□□□ -0.2
PAX6-234ENST00000638346 GREM2Q9H772 168 aa13.83□□□□□ -0.2
PAX6-234ENST00000638346 TFCP2L1Q9NZI6 479 aa13.83□□□□□ -0.2
PAX6-234ENST00000638346 PALD1Q9ULE6 856 aa13.83□□□□□ -0.2
PAX6-234ENST00000638346 RTCBQ9Y3I0 505 aaKnown RBP13.83□□□□□ -0.2
PAX6-234ENST00000638346 RTL9Q8NET4 1388 aa13.83□□□□□ -0.2
PAX6-234ENST00000638346 MED23Q9ULK4 1368 aa13.83□□□□□ -0.2
PAX6-234ENST00000638346 C4AP0C0L4 1744 aa13.83□□□□□ -0.2
PAX6-234ENST00000638346 RPS6KA4O75676 772 aa13.82□□□□□ -0.2
PAX6-234ENST00000638346 TIMM10P62072 90 aa13.82□□□□□ -0.2
PAX6-234ENST00000638346 NMIQ13287 307 aaPredicted RBP13.82□□□□□ -0.2
PAX6-234ENST00000638346 RNF20Q5VTR2 975 aa13.82□□□□□ -0.2
PAX6-234ENST00000638346 MAP4K1Q92918 833 aa13.82□□□□□ -0.2
PAX6-234ENST00000638346 KCNB2Q92953 911 aa13.82□□□□□ -0.2
PAX6-234ENST00000638346 RIPOR2Q9Y4F9 1068 aa13.82□□□□□ -0.2
PAX6-234ENST00000638346 LRP5O75197 1615 aa13.82□□□□□ -0.2
PAX6-234ENST00000638346 LAMB2P55268 1798 aa13.82□□□□□ -0.2
PAX6-234ENST00000638346 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP13.82□□□□□ -0.2
PAX6-234ENST00000638346 SUSD4Q5VX71 490 aa13.82□□□□□ -0.2
PAX6-234ENST00000638346 DNAJC2Q99543 621 aaKnown RBP13.82□□□□□ -0.2
PAX6-234ENST00000638346 PUS3Q9BZE2 481 aaKnown RBP13.82□□□□□ -0.2
PAX6-234ENST00000638346 TM6SF1Q9BZW5 370 aa13.82□□□□□ -0.2
PAX6-234ENST00000638346 PAG1Q9NWQ8 432 aa13.82□□□□□ -0.2
PAX6-234ENST00000638346 NIP7Q9Y221 180 aaKnown RBP eCLIP13.82□□□□□ -0.2
PAX6-234ENST00000638346 MROH5Q6ZUA9 1318 aa13.81□□□□□ -0.2
PAX6-234ENST00000638346 FRAT2O75474 233 aaPredicted RBP13.81□□□□□ -0.2
PAX6-234ENST00000638346 IFIT1P09914 478 aaKnown RBP13.81□□□□□ -0.2
PAX6-234ENST00000638346 HMGB2P26583 209 aaKnown RBP13.81□□□□□ -0.2
PAX6-234ENST00000638346 SLC15A2Q16348 729 aa13.81□□□□□ -0.2
PAX6-234ENST00000638346 CCDC152Q4G0S7 254 aa13.81□□□□□ -0.2
PAX6-234ENST00000638346 METTL24Q5JXM2 366 aa13.81□□□□□ -0.2
PAX6-234ENST00000638346 GORABQ5T7V8 394 aa13.81□□□□□ -0.2
PAX6-234ENST00000638346 FAM227BQ96M60 508 aa13.81□□□□□ -0.2
PAX6-234ENST00000638346 CNNM1Q9NRU3 951 aa13.81□□□□□ -0.2
PAX6-234ENST00000638346 STK32BQ9NY57 414 aa13.81□□□□□ -0.2
PAX6-234ENST00000638346 HMG20BQ9P0W2 317 aa13.81□□□□□ -0.2
PAX6-234ENST00000638346 SNX14Q9Y5W7 946 aa13.81□□□□□ -0.2
PAX6-234ENST00000638346 PNPLA7Q6ZV29 1317 aa13.81□□□□□ -0.2
PAX6-234ENST00000638346 NECTIN1Q15223 517 aa13.8□□□□□ -0.2
PAX6-234ENST00000638346 SYNE4Q8N205 404 aa13.8□□□□□ -0.2
PAX6-234ENST00000638346 ARHGEF1Q92888 912 aaKnown RBP13.8□□□□□ -0.2
PAX6-234ENST00000638346 INTS4Q96HW7 963 aaKnown RBP13.8□□□□□ -0.2
PAX6-234ENST00000638346 ZNF512BQ96KM6 892 aaPredicted RBP13.8□□□□□ -0.2
PAX6-234ENST00000638346 RIC1Q4ADV7 1423 aa13.8□□□□□ -0.2
PAX6-234ENST00000638346 A0A0D9SFI3 127 aa13.8□□□□□ -0.2
PAX6-234ENST00000638346 NTSR2O95665 410 aa13.8□□□□□ -0.2
PAX6-234ENST00000638346 SSFA2P28290 1259 aa13.8□□□□□ -0.2
PAX6-234ENST00000638346 NUCB2P80303 420 aa13.8□□□□□ -0.2
PAX6-234ENST00000638346 RAB3GAP1Q15042 981 aa13.8□□□□□ -0.2
PAX6-234ENST00000638346 ATP2B3Q16720 1220 aa13.8□□□□□ -0.2
PAX6-234ENST00000638346 SRP68Q9UHB9 627 aaKnown RBP13.8□□□□□ -0.2
PAX6-234ENST00000638346 SCN7AQ01118 1682 aa13.79□□□□□ -0.2
PAX6-234ENST00000638346 PDE8BO95263 885 aa13.79□□□□□ -0.2
PAX6-234ENST00000638346 KCNJ4P48050 445 aa13.79□□□□□ -0.2
PAX6-234ENST00000638346 MCMDC2Q4G0Z9 681 aa13.79□□□□□ -0.2
PAX6-234ENST00000638346 TTC39AQ5SRH9 613 aa13.79□□□□□ -0.2
PAX6-234ENST00000638346 XAGE2Q96GT9 111 aa13.79□□□□□ -0.2
PAX6-234ENST00000638346 CCDC85AQ96PX6 553 aaPredicted RBP13.79□□□□□ -0.2
PAX6-234ENST00000638346 PDGFDQ9GZP0 370 aaPredicted RBP13.79□□□□□ -0.2
PAX6-234ENST00000638346 HELLSQ9NRZ9 838 aa13.79□□□□□ -0.2
PAX6-234ENST00000638346 ZFYP08048 801 aaPredicted RBP13.78□□□□□ -0.2
PAX6-234ENST00000638346 PTMSP20962 102 aa13.78□□□□□ -0.2
PAX6-234ENST00000638346 PSMA5P28066 241 aa13.78□□□□□ -0.2
PAX6-234ENST00000638346 PTH1RQ03431 593 aa13.78□□□□□ -0.2
PAX6-234ENST00000638346 CUL4AQ13619 759 aa13.78□□□□□ -0.2
PAX6-234ENST00000638346 TRAPPC3LQ5T215 181 aa13.78□□□□□ -0.2
PAX6-234ENST00000638346 VGLL2Q8N8G2 317 aa13.78□□□□□ -0.2
PAX6-234ENST00000638346 TMX3Q96JJ7 454 aa13.78□□□□□ -0.2
PAX6-234ENST00000638346 GBP4Q96PP9 640 aa13.78□□□□□ -0.2
PAX6-234ENST00000638346 RBM8AQ9Y5S9 174 aaKnown RBP13.78□□□□□ -0.2
PAX6-234ENST00000638346 GOLIM4O00461 696 aa13.78□□□□□ -0.2
PAX6-234ENST00000638346 KRT32Q14532 448 aa13.78□□□□□ -0.2
PAX6-234ENST00000638346 PUM3Q15397 648 aaKnown RBP13.78□□□□□ -0.2
PAX6-234ENST00000638346 TSGA10IPQ3SY00 556 aa13.78□□□□□ -0.2
PAX6-234ENST00000638346 USPL1Q5W0Q7 1092 aa13.78□□□□□ -0.2
PAX6-234ENST00000638346 DDX46Q7L014 1031 aaKnown RBP13.78□□□□□ -0.2
PAX6-234ENST00000638346 COL23A1Q86Y22 540 aaPredicted RBP13.78□□□□□ -0.2
PAX6-234ENST00000638346 MPHOSPH8Q99549 860 aa13.78□□□□□ -0.2
PAX6-234ENST00000638346 NYXQ9GZU5 481 aa13.78□□□□□ -0.2
PAX6-234ENST00000638346 NARFQ9UHQ1 456 aa13.78□□□□□ -0.2
PAX6-234ENST00000638346 DDX60Q8IY21 1712 aaKnown RBP13.77□□□□□ -0.2
PAX6-234ENST00000638346 DDX11L8A8MPP1 907 aa13.77□□□□□ -0.21
PAX6-234ENST00000638346 TAF5LO75529 589 aa13.77□□□□□ -0.21
PAX6-234ENST00000638346 ADRA2BP18089 450 aa13.77□□□□□ -0.21
PAX6-234ENST00000638346 RFC4P35249 363 aa13.77□□□□□ -0.21
PAX6-234ENST00000638346 PRPF40BQ6NWY9 871 aaKnown RBP13.77□□□□□ -0.21
PAX6-234ENST00000638346 RASEFQ8IZ41 740 aa13.77□□□□□ -0.21
PAX6-234ENST00000638346 LPIN2Q92539 896 aa13.77□□□□□ -0.21
PAX6-234ENST00000638346 EDC3Q96F86 508 aaKnown RBP13.77□□□□□ -0.21
PAX6-234ENST00000638346 UPF3BQ9BZI7 483 aaKnown RBP13.77□□□□□ -0.21
PAX6-234ENST00000638346 CYP46A1Q9Y6A2 500 aa13.77□□□□□ -0.21
PAX6-234ENST00000638346 U3KPZ7 1027 aaPredicted RBP13.77□□□□□ -0.21
PAX6-234ENST00000638346 MCM4P33991 863 aa13.76□□□□□ -0.21
PAX6-234ENST00000638346 IGHMBP2P38935 993 aaKnown RBP13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms