RNA–Protein interactions for RNA: ENST00000636135.1

SCN2A-210, Transcript of sodium voltage-gated channel alpha subunit 2, humanhuman

TSL 5

Gene SCN2A, Length 8,519 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN2A-210ENST00000636135 OPA1O60313 960 aa5.06□□□□□ -1.6
SCN2A-210ENST00000636135 SMARCC1Q92922 1105 aaPredicted RBP5.06□□□□□ -1.6
SCN2A-210ENST00000636135 NRXN3Q9Y4C0 1643 aa5.06□□□□□ -1.6
SCN2A-210ENST00000636135 MCM3APO60318 1980 aa5.06□□□□□ -1.6
SCN2A-210ENST00000636135 CCDC175P0C221 793 aa5.06□□□□□ -1.6
SCN2A-210ENST00000636135 TNMDQ9H2S6 317 aa5.06□□□□□ -1.6
SCN2A-210ENST00000636135 CPSF1Q10570 1443 aaKnown RBP5.06□□□□□ -1.6
SCN2A-210ENST00000636135 LAMB4A4D0S4 1761 aa5.06□□□□□ -1.6
SCN2A-210ENST00000636135 SEPT6Q14141 434 aa5.06□□□□□ -1.6
SCN2A-210ENST00000636135 CFAP157Q5JU67 520 aa5.06□□□□□ -1.6
SCN2A-210ENST00000636135 P3H4Q92791 437 aa5.06□□□□□ -1.6
SCN2A-210ENST00000636135 IMPACTQ9P2X3 320 aa5.06□□□□□ -1.6
SCN2A-210ENST00000636135 BCAP29Q9UHQ4 241 aa5.06□□□□□ -1.6
SCN2A-210ENST00000636135 TTC21BQ7Z4L5 1316 aa5.06□□□□□ -1.6
SCN2A-210ENST00000636135 RGS12O14924 1447 aa5.06□□□□□ -1.6
SCN2A-210ENST00000636135 ATP8B1O43520 1251 aa5.06□□□□□ -1.6
SCN2A-210ENST00000636135 PPFIA1Q13136 1202 aa5.06□□□□□ -1.6
SCN2A-210ENST00000636135 TRMT1LQ7Z2T5 733 aaKnown RBP5.06□□□□□ -1.6
SCN2A-210ENST00000636135 NLRP5P59047 1200 aa5.06□□□□□ -1.6
SCN2A-210ENST00000636135 HSP90AB3PQ58FF7 597 aa5.06□□□□□ -1.6
SCN2A-210ENST00000636135 RBM33Q96EV2 1170 aaKnown RBP5.06□□□□□ -1.6
SCN2A-210ENST00000636135 RSRC1Q96IZ7 334 aaKnown RBP5.06□□□□□ -1.6
SCN2A-210ENST00000636135 STX1AQ16623 288 aa5.06□□□□□ -1.6
SCN2A-210ENST00000636135 ARHGAP29Q52LW3 1261 aa5.06□□□□□ -1.6
SCN2A-210ENST00000636135 CERS3Q8IU89 383 aa5.06□□□□□ -1.6
SCN2A-210ENST00000636135 ARHGAP45Q92619 1136 aa5.06□□□□□ -1.6
SCN2A-210ENST00000636135 TESK2Q96S53 571 aa5.06□□□□□ -1.6
SCN2A-210ENST00000636135 MSH6P52701 1360 aa5.06□□□□□ -1.6
SCN2A-210ENST00000636135 ANKRD45Q5TZF3 282 aa5.05□□□□□ -1.6
SCN2A-210ENST00000636135 GAS2L2Q8NHY3 880 aa5.05□□□□□ -1.6
SCN2A-210ENST00000636135 RUBCNQ92622 972 aa5.05□□□□□ -1.6
SCN2A-210ENST00000636135 CAMTA1Q9Y6Y1 1673 aa5.05□□□□□ -1.6
SCN2A-210ENST00000636135 PTPRMP28827 1452 aa5.05□□□□□ -1.6
SCN2A-210ENST00000636135 KIF1CO43896 1103 aaKnown RBP5.05□□□□□ -1.6
SCN2A-210ENST00000636135 ATP2B2Q01814 1243 aa5.05□□□□□ -1.6
SCN2A-210ENST00000636135 NBPF8Q3BBV2 869 aa5.05□□□□□ -1.6
SCN2A-210ENST00000636135 CCDC114Q96M63 670 aa5.05□□□□□ -1.6
SCN2A-210ENST00000636135 R3HCC1Q9Y3T6 440 aaKnown RBP5.05□□□□□ -1.6
SCN2A-210ENST00000636135 CYP46A1Q9Y6A2 500 aa5.05□□□□□ -1.6
SCN2A-210ENST00000636135 EID1Q9Y6B2 187 aa5.05□□□□□ -1.6
SCN2A-210ENST00000636135 MTCL1Q9Y4B5 1905 aaKnown RBP5.05□□□□□ -1.6
SCN2A-210ENST00000636135 TUBGCP6Q96RT7 1819 aa5.05□□□□□ -1.6
SCN2A-210ENST00000636135 DISP3Q9P2K9 1392 aa5.05□□□□□ -1.6
SCN2A-210ENST00000636135 ZFC3H1O60293 1989 aaKnown RBP5.05□□□□□ -1.6
SCN2A-210ENST00000636135 ZNF644Q9H582 1327 aaPredicted RBP5.05□□□□□ -1.6
SCN2A-210ENST00000636135 CACNA1SQ13698 1873 aa5.05□□□□□ -1.6
SCN2A-210ENST00000636135 EBAG9O00559 213 aa5.05□□□□□ -1.6
SCN2A-210ENST00000636135 CCDC181Q5TID7 509 aa5.05□□□□□ -1.6
SCN2A-210ENST00000636135 MED4Q9NPJ6 270 aa5.05□□□□□ -1.6
SCN2A-210ENST00000636135 C9orf78Q9NZ63 289 aaPredicted RBP5.05□□□□□ -1.6
SCN2A-210ENST00000636135 YTHDC2Q9H6S0 1430 aaKnown RBP5.05□□□□□ -1.6
SCN2A-210ENST00000636135 IFIT2P09913 472 aaKnown RBP5.05□□□□□ -1.6
SCN2A-210ENST00000636135 CETN1Q12798 172 aa5.05□□□□□ -1.6
SCN2A-210ENST00000636135 USP37Q86T82 979 aa5.05□□□□□ -1.6
SCN2A-210ENST00000636135 BMP2KQ9NSY1 1161 aaPredicted RBP5.05□□□□□ -1.6
SCN2A-210ENST00000636135 APOBRQ0VD83 1088 aa5.05□□□□□ -1.6
SCN2A-210ENST00000636135 CALR3Q96L12 384 aaKnown RBP5.05□□□□□ -1.6
SCN2A-210ENST00000636135 ZNF692Q9BU19 519 aaPredicted RBP5.05□□□□□ -1.6
SCN2A-210ENST00000636135 THEGQ9P2T0 379 aa5.05□□□□□ -1.6
SCN2A-210ENST00000636135 SBNO1A3KN83 1393 aa5.05□□□□□ -1.6
SCN2A-210ENST00000636135 PAFAH1B1P43034 410 aa5.04□□□□□ -1.6
SCN2A-210ENST00000636135 EIF5P55010 431 aaKnown RBP5.04□□□□□ -1.6
SCN2A-210ENST00000636135 DEUP1Q05D60 604 aa5.04□□□□□ -1.6
SCN2A-210ENST00000636135 TRIM14Q14142 442 aa5.04□□□□□ -1.6
SCN2A-210ENST00000636135 RPAP2Q8IXW5 612 aaPredicted RBP5.04□□□□□ -1.6
SCN2A-210ENST00000636135 NUP62CLQ9H1M0 184 aa5.04□□□□□ -1.6
SCN2A-210ENST00000636135 VCX3BQ9H321 246 aa5.04□□□□□ -1.6
SCN2A-210ENST00000636135 NWD1Q149M9 1564 aa5.04□□□□□ -1.6
SCN2A-210ENST00000636135 NCAPD2Q15021 1401 aa5.04□□□□□ -1.6
SCN2A-210ENST00000636135 SEMA3FQ13275 785 aa5.04□□□□□ -1.6
SCN2A-210ENST00000636135 TTLL12Q14166 644 aaPredicted RBP5.04□□□□□ -1.6
SCN2A-210ENST00000636135 BICDL1Q6ZP65 573 aa5.04□□□□□ -1.6
SCN2A-210ENST00000636135 GFM2Q969S9 779 aaKnown RBP5.04□□□□□ -1.6
SCN2A-210ENST00000636135 OGFRQ9NZT2 677 aa5.04□□□□□ -1.6
SCN2A-210ENST00000636135 MNAT1P51948 309 aa5.04□□□□□ -1.6
SCN2A-210ENST00000636135 WASHC4Q2M389 1173 aa5.04□□□□□ -1.6
SCN2A-210ENST00000636135 GBP6Q6ZN66 633 aa5.04□□□□□ -1.6
SCN2A-210ENST00000636135 HOMEZQ8IX15 550 aa5.04□□□□□ -1.6
SCN2A-210ENST00000636135 STRN4Q9NRL3 753 aa5.04□□□□□ -1.6
SCN2A-210ENST00000636135 NOL7Q9UMY1 257 aaKnown RBP5.04□□□□□ -1.6
SCN2A-210ENST00000636135 STK24Q9Y6E0 443 aa5.04□□□□□ -1.6
SCN2A-210ENST00000636135 ZNF407Q9C0G0 2248 aa5.04□□□□□ -1.6
SCN2A-210ENST00000636135 G3BP1Q13283 466 aaKnown RBP eCLIP5.04□□□□□ -1.6
SCN2A-210ENST00000636135 UTP14CQ5TAP6 766 aaKnown RBP5.04□□□□□ -1.6
SCN2A-210ENST00000636135 MAP3K21Q5TCX8 1036 aa5.04□□□□□ -1.6
SCN2A-210ENST00000636135 NFXL1Q6ZNB6 911 aa5.04□□□□□ -1.6
SCN2A-210ENST00000636135 NBPF11Q86T75 865 aa5.04□□□□□ -1.6
SCN2A-210ENST00000636135 RNF168Q8IYW5 571 aaPredicted RBP5.04□□□□□ -1.6
SCN2A-210ENST00000636135 ARHGAP24Q8N264 748 aa5.04□□□□□ -1.6
SCN2A-210ENST00000636135 MRGBPQ9NV56 204 aa5.04□□□□□ -1.6
SCN2A-210ENST00000636135 ALS2Q96Q42 1657 aa5.04□□□□□ -1.6
SCN2A-210ENST00000636135 GNAI2P04899 355 aa5.04□□□□□ -1.6
SCN2A-210ENST00000636135 RBM5P52756 815 aaKnown RBP eCLIP5.04□□□□□ -1.6
SCN2A-210ENST00000636135 COG3Q96JB2 828 aa5.04□□□□□ -1.6
SCN2A-210ENST00000636135 NSD3Q9BZ95 1437 aa5.04□□□□□ -1.6
SCN2A-210ENST00000636135 ANKRD36A6QL64 1941 aa5.04□□□□□ -1.6
SCN2A-210ENST00000636135 ANKRD36CQ5JPF3 1778 aa5.04□□□□□ -1.6
SCN2A-210ENST00000636135 ZFYP08048 801 aaPredicted RBP5.04□□□□□ -1.6
SCN2A-210ENST00000636135 ATF7IPQ6VMQ6 1270 aa5.04□□□□□ -1.6
SCN2A-210ENST00000636135 TTC21AQ8NDW8 1320 aa5.04□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms