RNA–Protein interactions for RNA: ENST00000627665.1

SCN8A-210, Transcript of sodium voltage-gated channel alpha subunit 8, humanhuman

TSL 5

Gene SCN8A, Length 506 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN8A-210ENST00000627665 FOXC1Q12948 553 aa4.05□□□□□ -1.76
SCN8A-210ENST00000627665 ARSJQ5FYB0 599 aaPredicted RBP4.05□□□□□ -1.76
SCN8A-210ENST00000627665 WDR44Q5JSH3 913 aa4.05□□□□□ -1.76
SCN8A-210ENST00000627665 SH3PXD2AQ5TCZ1 1133 aa4.05□□□□□ -1.76
SCN8A-210ENST00000627665 TTC39BQ5VTQ0 682 aaPredicted RBP4.05□□□□□ -1.76
SCN8A-210ENST00000627665 CYP4X1Q8N118 509 aa4.05□□□□□ -1.76
SCN8A-210ENST00000627665 CMTR1Q8N1G2 835 aaKnown RBP4.05□□□□□ -1.76
SCN8A-210ENST00000627665 ITPKCQ96DU7 683 aa4.05□□□□□ -1.76
SCN8A-210ENST00000627665 SUSD3Q96L08 255 aa4.05□□□□□ -1.76
SCN8A-210ENST00000627665 AGBL1Q96MI9 1066 aa4.05□□□□□ -1.76
SCN8A-210ENST00000627665 SETDB2Q96T68 719 aa4.05□□□□□ -1.76
SCN8A-210ENST00000627665 DNAJC2Q99543 621 aaKnown RBP4.05□□□□□ -1.76
SCN8A-210ENST00000627665 BUD13Q9BRD0 619 aaKnown RBP eCLIP4.05□□□□□ -1.76
SCN8A-210ENST00000627665 GRIP2Q9C0E4 1043 aa4.05□□□□□ -1.76
SCN8A-210ENST00000627665 GGNBP2Q9H3C7 697 aa4.05□□□□□ -1.76
SCN8A-210ENST00000627665 ZNF395Q9H8N7 513 aaPredicted RBP4.05□□□□□ -1.76
SCN8A-210ENST00000627665 ELP3Q9H9T3 547 aa4.05□□□□□ -1.76
SCN8A-210ENST00000627665 ZFYVE28Q9HCC9 887 aa4.05□□□□□ -1.76
SCN8A-210ENST00000627665 UGGT2Q9NYU1 1516 aa4.05□□□□□ -1.76
SCN8A-210ENST00000627665 KIAA0556O60303 1618 aa4.04□□□□□ -1.76
SCN8A-210ENST00000627665 SPATA31C2B4DYI2 1134 aa4.04□□□□□ -1.76
SCN8A-210ENST00000627665 TXLNAP40222 546 aa4.04□□□□□ -1.76
SCN8A-210ENST00000627665 NFE2L2Q16236 605 aa4.04□□□□□ -1.76
SCN8A-210ENST00000627665 ZNF697Q5TEC3 545 aa4.04□□□□□ -1.76
SCN8A-210ENST00000627665 ZNF598Q86UK7 904 aaKnown RBP4.04□□□□□ -1.76
SCN8A-210ENST00000627665 RELL1Q8IUW5 271 aa4.04□□□□□ -1.76
SCN8A-210ENST00000627665 CKAP2LQ8IYA6 745 aa4.04□□□□□ -1.76
SCN8A-210ENST00000627665 PGBD3Q8N328 593 aa4.04□□□□□ -1.76
SCN8A-210ENST00000627665 DHX38Q92620 1227 aaKnown RBP4.04□□□□□ -1.76
SCN8A-210ENST00000627665 POLMQ9NP87 494 aaPredicted RBP4.04□□□□□ -1.76
SCN8A-210ENST00000627665 RTCBQ9Y3I0 505 aaKnown RBP4.04□□□□□ -1.76
SCN8A-210ENST00000627665 NCOA1Q15788 1441 aa4.04□□□□□ -1.76
SCN8A-210ENST00000627665 FHOD3Q2V2M9 1422 aa4.04□□□□□ -1.76
SCN8A-210ENST00000627665 A0A1B0GTH6 734 aa4.03□□□□□ -1.76
SCN8A-210ENST00000627665 ANKRD62A6NC57 917 aa4.03□□□□□ -1.76
SCN8A-210ENST00000627665 CTSHP09668 335 aa4.03□□□□□ -1.76
SCN8A-210ENST00000627665 USP17L7P0C7H9 530 aa4.03□□□□□ -1.76
SCN8A-210ENST00000627665 XRCC5P13010 732 aaKnown RBP4.03□□□□□ -1.76
SCN8A-210ENST00000627665 EDN3P14138 238 aa4.03□□□□□ -1.76
SCN8A-210ENST00000627665 RBL2Q08999 1139 aa4.03□□□□□ -1.76
SCN8A-210ENST00000627665 C4orf17Q53FE4 359 aa4.03□□□□□ -1.76
SCN8A-210ENST00000627665 FAM26DQ5JW98 314 aa4.03□□□□□ -1.76
SCN8A-210ENST00000627665 SPRYD7Q5W111 196 aa4.03□□□□□ -1.76
SCN8A-210ENST00000627665 BTLAQ7Z6A9 289 aa4.03□□□□□ -1.76
SCN8A-210ENST00000627665 FAM9AQ8IZU1 332 aaPredicted RBP4.03□□□□□ -1.76
SCN8A-210ENST00000627665 PMFBP1Q8TBY8 1022 aa4.03□□□□□ -1.76
SCN8A-210ENST00000627665 GPRASP2Q96D09 838 aa4.03□□□□□ -1.76
SCN8A-210ENST00000627665 SEC16BQ96JE7 1060 aa4.03□□□□□ -1.76
SCN8A-210ENST00000627665 NOC4LQ9BVI4 516 aaKnown RBP4.03□□□□□ -1.76
SCN8A-210ENST00000627665 CFHR5Q9BXR6 569 aa4.03□□□□□ -1.76
SCN8A-210ENST00000627665 LNPKQ9C0E8 428 aa4.03□□□□□ -1.76
SCN8A-210ENST00000627665 ZSWIM4Q9H7M6 989 aa4.03□□□□□ -1.76
SCN8A-210ENST00000627665 RNF19AQ9NV58 838 aa4.03□□□□□ -1.76
SCN8A-210ENST00000627665 R3HCC1Q9Y3T6 440 aaKnown RBP4.03□□□□□ -1.76
SCN8A-210ENST00000627665 EFCAB5A4FU69 1503 aa4.03□□□□□ -1.76
SCN8A-210ENST00000627665 ZFYVE16Q7Z3T8 1539 aa4.03□□□□□ -1.76
SCN8A-210ENST00000627665 ARHGEF12Q9NZN5 1544 aa4.03□□□□□ -1.76
SCN8A-210ENST00000627665 FER1L4A9Z1Z3 1794 aa4.03□□□□□ -1.76
SCN8A-210ENST00000627665 LOC100996750A0A140TA64 210 aa4.02□□□□□ -1.77
SCN8A-210ENST00000627665 TLDC2A0PJX2 215 aa4.02□□□□□ -1.77
SCN8A-210ENST00000627665 U2SURPO15042 1029 aaKnown RBP4.02□□□□□ -1.77
SCN8A-210ENST00000627665 XYLBO75191 536 aa4.02□□□□□ -1.77
SCN8A-210ENST00000627665 SSBP05455 408 aaKnown RBP eCLIP4.02□□□□□ -1.77
SCN8A-210ENST00000627665 CES1P23141 567 aa4.02□□□□□ -1.77
SCN8A-210ENST00000627665 INPP5BP32019 993 aa4.02□□□□□ -1.77
SCN8A-210ENST00000627665 PHKA2P46019 1235 aa4.02□□□□□ -1.77
SCN8A-210ENST00000627665 TNNI2P48788 182 aa4.02□□□□□ -1.77
SCN8A-210ENST00000627665 COL9A2Q14055 689 aaPredicted RBP4.02□□□□□ -1.77
SCN8A-210ENST00000627665 CCDC144BQ3MJ40 725 aa4.02□□□□□ -1.77
SCN8A-210ENST00000627665 ZNF394Q53GI3 561 aa4.02□□□□□ -1.77
SCN8A-210ENST00000627665 NBPF6Q5VWK0 638 aa4.02□□□□□ -1.77
SCN8A-210ENST00000627665 NLRP13Q86W25 1043 aa4.02□□□□□ -1.77
SCN8A-210ENST00000627665 GALNT12Q8IXK2 581 aa4.02□□□□□ -1.77
SCN8A-210ENST00000627665 ZNF295-AS1Q8N0V1 137 aa4.02□□□□□ -1.77
SCN8A-210ENST00000627665 MEIOBQ8N635 442 aa4.02□□□□□ -1.77
SCN8A-210ENST00000627665 KDF1Q8NAX2 398 aaPredicted RBP4.02□□□□□ -1.77
SCN8A-210ENST00000627665 EPS8L3Q8TE67 593 aaKnown RBP4.02□□□□□ -1.77
SCN8A-210ENST00000627665 RNF166Q96A37 237 aaPredicted RBP4.02□□□□□ -1.77
SCN8A-210ENST00000627665 MRFAP1L1Q96HT8 127 aa4.02□□□□□ -1.77
SCN8A-210ENST00000627665 NBPF4Q96M43 638 aa4.02□□□□□ -1.77
SCN8A-210ENST00000627665 CEP63Q96MT8 703 aa4.02□□□□□ -1.77
SCN8A-210ENST00000627665 KRTAP4-6Q9BYQ5 205 aa4.02□□□□□ -1.77
SCN8A-210ENST00000627665 BCO2Q9BYV7 579 aa4.02□□□□□ -1.77
SCN8A-210ENST00000627665 SUV39H2Q9H5I1 410 aa4.02□□□□□ -1.77
SCN8A-210ENST00000627665 ZFAND3Q9H8U3 227 aa4.02□□□□□ -1.77
SCN8A-210ENST00000627665 ABI2Q9NYB9 513 aaPredicted RBP4.02□□□□□ -1.77
SCN8A-210ENST00000627665 RGS17Q9UGC6 210 aaPredicted RBP4.02□□□□□ -1.77
SCN8A-210ENST00000627665 STRIP2Q9ULQ0 834 aa4.02□□□□□ -1.77
SCN8A-210ENST00000627665 PPM1HQ9ULR3 514 aa4.02□□□□□ -1.77
SCN8A-210ENST00000627665 TTF2Q9UNY4 1162 aaKnown RBP4.02□□□□□ -1.77
SCN8A-210ENST00000627665 BCS1LQ9Y276 419 aa4.02□□□□□ -1.77
SCN8A-210ENST00000627665 MAGI2Q86UL8 1455 aa4.02□□□□□ -1.77
SCN8A-210ENST00000627665 ABCA9Q8IUA7 1624 aa4.02□□□□□ -1.77
SCN8A-210ENST00000627665 ABCA8O94911 1581 aa4.02□□□□□ -1.77
SCN8A-210ENST00000627665 A6NHS1 94 aa4.01□□□□□ -1.77
SCN8A-210ENST00000627665 PHF20L1A8MW92 1017 aa4.01□□□□□ -1.77
SCN8A-210ENST00000627665 SPINT1O43278 529 aa4.01□□□□□ -1.77
SCN8A-210ENST00000627665 TIMP2P16035 220 aa4.01□□□□□ -1.77
SCN8A-210ENST00000627665 GJA8P48165 433 aa4.01□□□□□ -1.77
SCN8A-210ENST00000627665 IFFO2Q5TF58 517 aa4.01□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms