RNA–Protein interactions for RNA: ENST00000624688.2

C3orf56-201, Transcript of chromosome 3 open reading frame 56, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C3orf56, Length 1,740 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C3orf56-201ENST00000624688 TRPC5Q9UL62 973 aaPredicted RBP15.94■□□□□ 0.14
C3orf56-201ENST00000624688 RBM8AQ9Y5S9 174 aaKnown RBP15.94■□□□□ 0.14
C3orf56-201ENST00000624688 TAF5LO75529 589 aa15.94■□□□□ 0.14
C3orf56-201ENST00000624688 IFIT1P09914 478 aaKnown RBP15.94■□□□□ 0.14
C3orf56-201ENST00000624688 SMIM5Q71RC9 77 aa15.94■□□□□ 0.14
C3orf56-201ENST00000624688 CNNM1Q9NRU3 951 aa15.94■□□□□ 0.14
C3orf56-201ENST00000624688 ZNF652Q9Y2D9 606 aa15.94■□□□□ 0.14
C3orf56-201ENST00000624688 TAF1LQ8IZX4 1826 aa15.94■□□□□ 0.14
C3orf56-201ENST00000624688 ATP2B3Q16720 1220 aa15.93■□□□□ 0.14
C3orf56-201ENST00000624688 CREB3L3Q68CJ9 461 aa15.93■□□□□ 0.14
C3orf56-201ENST00000624688 SEPT12Q8IYM1 358 aa15.93■□□□□ 0.14
C3orf56-201ENST00000624688 ZGPATQ8N5A5 531 aaKnown RBP15.93■□□□□ 0.14
C3orf56-201ENST00000624688 BCL2L12Q9HB09 334 aa15.93■□□□□ 0.14
C3orf56-201ENST00000624688 RPS6KA4O75676 772 aa15.92■□□□□ 0.14
C3orf56-201ENST00000624688 KCNA4P22459 653 aa15.92■□□□□ 0.14
C3orf56-201ENST00000624688 MCM4P33991 863 aa15.92■□□□□ 0.14
C3orf56-201ENST00000624688 CUL4AQ13619 759 aa15.92■□□□□ 0.14
C3orf56-201ENST00000624688 ADCK5Q3MIX3 580 aa15.92■□□□□ 0.14
C3orf56-201ENST00000624688 CCDC158Q5M9N0 1113 aa15.92■□□□□ 0.14
C3orf56-201ENST00000624688 TICAM2Q86XR7 235 aa15.92■□□□□ 0.14
C3orf56-201ENST00000624688 TNPO1Q92973 898 aaKnown RBP15.92■□□□□ 0.14
C3orf56-201ENST00000624688 SEC62Q99442 399 aaKnown RBP15.92■□□□□ 0.14
C3orf56-201ENST00000624688 RTL9Q8NET4 1388 aa15.91■□□□□ 0.14
C3orf56-201ENST00000624688 ABCC12Q96J65 1359 aa15.91■□□□□ 0.14
C3orf56-201ENST00000624688 SLC27A2O14975 620 aa15.91■□□□□ 0.14
C3orf56-201ENST00000624688 RGL2O15211 777 aa15.91■□□□□ 0.14
C3orf56-201ENST00000624688 TTC39AQ5SRH9 613 aa15.91■□□□□ 0.14
C3orf56-201ENST00000624688 SEC31BQ9NQW1 1179 aa15.91■□□□□ 0.14
C3orf56-201ENST00000624688 CCNL1Q9UK58 526 aaPredicted RBP15.91■□□□□ 0.14
C3orf56-201ENST00000624688 ARAP2Q8WZ64 1704 aa15.91■□□□□ 0.14
C3orf56-201ENST00000624688 PDE8BO95263 885 aa15.91■□□□□ 0.14
C3orf56-201ENST00000624688 SCARF1Q14162 830 aa15.91■□□□□ 0.14
C3orf56-201ENST00000624688 SLFNL1Q499Z3 407 aa15.91■□□□□ 0.14
C3orf56-201ENST00000624688 MCMDC2Q4G0Z9 681 aa15.91■□□□□ 0.14
C3orf56-201ENST00000624688 USPL1Q5W0Q7 1092 aa15.91■□□□□ 0.14
C3orf56-201ENST00000624688 CCDC129Q6ZRS4 1044 aa15.91■□□□□ 0.14
C3orf56-201ENST00000624688 TM6SF1Q9BZW5 370 aa15.91■□□□□ 0.14
C3orf56-201ENST00000624688 CWC22Q9HCG8 908 aaKnown RBP15.91■□□□□ 0.14
C3orf56-201ENST00000624688 COL4A1P02462 1669 aa15.91■□□□□ 0.14
C3orf56-201ENST00000624688 CASZ1Q86V15 1759 aa15.9■□□□□ 0.14
C3orf56-201ENST00000624688 CPA1P15085 419 aa15.9■□□□□ 0.14
C3orf56-201ENST00000624688 ZMYM1Q5SVZ6 1142 aa15.9■□□□□ 0.14
C3orf56-201ENST00000624688 GORABQ5T7V8 394 aa15.9■□□□□ 0.14
C3orf56-201ENST00000624688 NOL8Q76FK4 1167 aaKnown RBP15.9■□□□□ 0.14
C3orf56-201ENST00000624688 ZSWIM6Q9HCJ5 1215 aa15.9■□□□□ 0.14
C3orf56-201ENST00000624688 RPAP1Q9BWH6 1393 aaPredicted RBP15.89■□□□□ 0.13
C3orf56-201ENST00000624688 CYP2E1P05181 493 aaPredicted RBP15.89■□□□□ 0.13
C3orf56-201ENST00000624688 CASTP20810 708 aaKnown RBP15.89■□□□□ 0.13
C3orf56-201ENST00000624688 FGFR2P21802 821 aa15.89■□□□□ 0.13
C3orf56-201ENST00000624688 SSFA2P28290 1259 aa15.89■□□□□ 0.13
C3orf56-201ENST00000624688 AK2P54819 239 aa15.89■□□□□ 0.13
C3orf56-201ENST00000624688 CCDC152Q4G0S7 254 aa15.89■□□□□ 0.13
C3orf56-201ENST00000624688 TBC1D9BQ66K14 1250 aa15.89■□□□□ 0.13
C3orf56-201ENST00000624688 AMIGO3Q86WK7 504 aa15.89■□□□□ 0.13
C3orf56-201ENST00000624688 JAKMIP1Q96N16 626 aaKnown RBP15.89■□□□□ 0.13
C3orf56-201ENST00000624688 HELLSQ9NRZ9 838 aa15.89■□□□□ 0.13
C3orf56-201ENST00000624688 NARFQ9UHQ1 456 aa15.89■□□□□ 0.13
C3orf56-201ENST00000624688 AKAP11Q9UKA4 1901 aa15.89■□□□□ 0.13
C3orf56-201ENST00000624688 MROH5Q6ZUA9 1318 aa15.89■□□□□ 0.13
C3orf56-201ENST00000624688 COL24A1Q17RW2 1714 aa15.89■□□□□ 0.13
C3orf56-201ENST00000624688 GNPATO15228 680 aa15.88■□□□□ 0.13
C3orf56-201ENST00000624688 HSP90B1P14625 803 aaKnown RBP15.88■□□□□ 0.13
C3orf56-201ENST00000624688 KCNJ4P48050 445 aa15.88■□□□□ 0.13
C3orf56-201ENST00000624688 ERFEQ4G0M1 354 aa15.88■□□□□ 0.13
C3orf56-201ENST00000624688 ZNF512BQ96KM6 892 aaPredicted RBP15.88■□□□□ 0.13
C3orf56-201ENST00000624688 QTRT2Q9H974 415 aaKnown RBP15.88■□□□□ 0.13
C3orf56-201ENST00000624688 SRP68Q9UHB9 627 aaKnown RBP15.88■□□□□ 0.13
C3orf56-201ENST00000624688 TAF6LQ9Y6J9 622 aa15.88■□□□□ 0.13
C3orf56-201ENST00000624688 C4BP0C0L5 1744 aa15.88■□□□□ 0.13
C3orf56-201ENST00000624688 RNF113AO15541 343 aaKnown RBP15.88■□□□□ 0.13
C3orf56-201ENST00000624688 ZKSCAN1P17029 563 aaPredicted RBP15.88■□□□□ 0.13
C3orf56-201ENST00000624688 ZAP70P43403 619 aa15.88■□□□□ 0.13
C3orf56-201ENST00000624688 FKBP4Q02790 459 aaKnown RBP eCLIP15.88■□□□□ 0.13
C3orf56-201ENST00000624688 TSGA10IPQ3SY00 556 aa15.88■□□□□ 0.13
C3orf56-201ENST00000624688 RUFY3Q7L099 469 aa15.88■□□□□ 0.13
C3orf56-201ENST00000624688 INTS4Q96HW7 963 aaKnown RBP15.88■□□□□ 0.13
C3orf56-201ENST00000624688 DEKP35659 375 aaKnown RBP15.87■□□□□ 0.13
C3orf56-201ENST00000624688 MCAMP43121 646 aa15.87■□□□□ 0.13
C3orf56-201ENST00000624688 PKP1Q13835 747 aa15.87■□□□□ 0.13
C3orf56-201ENST00000624688 COL9A3Q14050 684 aaPredicted RBP15.87■□□□□ 0.13
C3orf56-201ENST00000624688 PUM3Q15397 648 aaKnown RBP15.87■□□□□ 0.13
C3orf56-201ENST00000624688 PI16Q6UXB8 463 aa15.87■□□□□ 0.13
C3orf56-201ENST00000624688 C3orf67Q6ZVT6 689 aa15.87■□□□□ 0.13
C3orf56-201ENST00000624688 HELBQ8NG08 1087 aaPredicted RBP15.87■□□□□ 0.13
C3orf56-201ENST00000624688 BCL11BQ9C0K0 894 aaPredicted RBP15.87■□□□□ 0.13
C3orf56-201ENST00000624688 C4AP0C0L4 1744 aa15.87■□□□□ 0.13
C3orf56-201ENST00000624688 NUCB2P80303 420 aa15.86■□□□□ 0.13
C3orf56-201ENST00000624688 VPS53Q5VIR6 699 aa15.86■□□□□ 0.13
C3orf56-201ENST00000624688 RNF20Q5VTR2 975 aa15.86■□□□□ 0.13
C3orf56-201ENST00000624688 BICDL1Q6ZP65 573 aa15.86■□□□□ 0.13
C3orf56-201ENST00000624688 CLEC17AQ6ZS10 378 aa15.86■□□□□ 0.13
C3orf56-201ENST00000624688 HMG20BQ9P0W2 317 aa15.86■□□□□ 0.13
C3orf56-201ENST00000624688 CYP46A1Q9Y6A2 500 aa15.86■□□□□ 0.13
C3orf56-201ENST00000624688 MAST3O60307 1309 aa15.86■□□□□ 0.13
C3orf56-201ENST00000624688 BRWD3Q6RI45 1802 aa15.86■□□□□ 0.13
C3orf56-201ENST00000624688 SF3B3Q15393 1217 aaKnown RBP15.85■□□□□ 0.13
C3orf56-201ENST00000624688 SLC10A5Q5PT55 438 aa15.85■□□□□ 0.13
C3orf56-201ENST00000624688 LPIN2Q92539 896 aa15.85■□□□□ 0.13
C3orf56-201ENST00000624688 ARHGEF1Q92888 912 aaKnown RBP15.85■□□□□ 0.13
C3orf56-201ENST00000624688 MPHOSPH8Q99549 860 aa15.85■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms