RNA–Protein interactions for RNA: ENST00000622179.4

SIRPA-204, Transcript of signal regulatory protein alpha, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SIRPA, Length 4,570 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIRPA-204ENST00000622179 ADCK5Q3MIX3 580 aa15.46■□□□□ 0.06
SIRPA-204ENST00000622179 PRC1O43663 620 aa15.45■□□□□ 0.06
SIRPA-204ENST00000622179 UVSSAQ2YD98 709 aa15.45■□□□□ 0.06
SIRPA-204ENST00000622179 TTLL5Q6EMB2 1281 aa15.45■□□□□ 0.06
SIRPA-204ENST00000622179 DZIP3Q86Y13 1208 aaKnown RBP15.45■□□□□ 0.06
SIRPA-204ENST00000622179 AXIN2Q9Y2T1 843 aa15.45■□□□□ 0.06
SIRPA-204ENST00000622179 DEPDC5O75140 1603 aa15.45■□□□□ 0.06
SIRPA-204ENST00000622179 FAM177A1Q8N128 213 aaPredicted RBP15.45■□□□□ 0.06
SIRPA-204ENST00000622179 NCOA5Q9HCD5 579 aaKnown RBP15.45■□□□□ 0.06
SIRPA-204ENST00000622179 PTPDC1A2A3K4 754 aa15.45■□□□□ 0.06
SIRPA-204ENST00000622179 ATP6V1AP38606 617 aa15.45■□□□□ 0.06
SIRPA-204ENST00000622179 ZNF445P59923 1031 aa15.45■□□□□ 0.06
SIRPA-204ENST00000622179 DNAJC10Q8IXB1 793 aa15.45■□□□□ 0.06
SIRPA-204ENST00000622179 MNS1Q8NEH6 495 aa15.45■□□□□ 0.06
SIRPA-204ENST00000622179 ZC3H13Q5T200 1668 aaKnown RBP15.45■□□□□ 0.06
SIRPA-204ENST00000622179 SAMD1Q6SPF0 538 aaPredicted RBP15.44■□□□□ 0.06
SIRPA-204ENST00000622179 CLTCQ00610 1675 aaKnown RBP15.44■□□□□ 0.06
SIRPA-204ENST00000622179 RXRAP19793 462 aa15.44■□□□□ 0.06
SIRPA-204ENST00000622179 CCDC191Q8NCU4 936 aa15.44■□□□□ 0.06
SIRPA-204ENST00000622179 GPT2Q8TD30 523 aa15.44■□□□□ 0.06
SIRPA-204ENST00000622179 CCDC47Q96A33 483 aaKnown RBP15.44■□□□□ 0.06
SIRPA-204ENST00000622179 TRIM34Q9BYJ4 488 aa15.44■□□□□ 0.06
SIRPA-204ENST00000622179 DNAJC25Q9H1X3 360 aa15.44■□□□□ 0.06
SIRPA-204ENST00000622179 SLC4A8Q2Y0W8 1093 aa15.44■□□□□ 0.06
SIRPA-204ENST00000622179 WASF1Q92558 559 aa15.44■□□□□ 0.06
SIRPA-204ENST00000622179 LSG1Q9H089 658 aaKnown RBP15.44■□□□□ 0.06
SIRPA-204ENST00000622179 CFAP100Q494V2 611 aa15.44■□□□□ 0.06
SIRPA-204ENST00000622179 KBTBD3Q8NAB2 608 aa15.44■□□□□ 0.06
SIRPA-204ENST00000622179 CCDC112Q8NEF3 446 aa15.44■□□□□ 0.06
SIRPA-204ENST00000622179 SLC26A6Q9BXS9 759 aa15.44■□□□□ 0.06
SIRPA-204ENST00000622179 FRMPD1Q5SYB0 1578 aa15.44■□□□□ 0.06
SIRPA-204ENST00000622179 ZKSCAN5Q9Y2L8 839 aa15.43■□□□□ 0.06
SIRPA-204ENST00000622179 ERBB3P21860 1342 aa15.43■□□□□ 0.06
SIRPA-204ENST00000622179 JAK2O60674 1132 aa15.43■□□□□ 0.06
SIRPA-204ENST00000622179 MFSD6Q6ZSS7 791 aa15.43■□□□□ 0.06
SIRPA-204ENST00000622179 KIF2CQ99661 725 aa15.43■□□□□ 0.06
SIRPA-204ENST00000622179 CTAGE5O15320 804 aa15.43■□□□□ 0.06
SIRPA-204ENST00000622179 CDC37L1Q7L3B6 337 aa15.43■□□□□ 0.06
SIRPA-204ENST00000622179 ZPR1O75312 459 aa15.43■□□□□ 0.06
SIRPA-204ENST00000622179 SSRP1Q08945 709 aaKnown RBP15.43■□□□□ 0.06
SIRPA-204ENST00000622179 FAM200AQ8TCP9 573 aa15.43■□□□□ 0.06
SIRPA-204ENST00000622179 TYRO3Q06418 890 aa15.42■□□□□ 0.06
SIRPA-204ENST00000622179 XAGE2Q96GT9 111 aa15.42■□□□□ 0.06
SIRPA-204ENST00000622179 C16orf45Q96MC5 204 aaPredicted RBP15.42■□□□□ 0.06
SIRPA-204ENST00000622179 NIP7Q9Y221 180 aaKnown RBP eCLIP15.42■□□□□ 0.06
SIRPA-204ENST00000622179 TMEM94Q12767 1356 aa15.42■□□□□ 0.06
SIRPA-204ENST00000622179 UQCRFS1P1P0C7P4 283 aa15.42■□□□□ 0.06
SIRPA-204ENST00000622179 ATP5JP18859 108 aa15.42■□□□□ 0.06
SIRPA-204ENST00000622179 MARCKSP29966 332 aaPredicted RBP15.42■□□□□ 0.06
SIRPA-204ENST00000622179 ATP2B2Q01814 1243 aa15.42■□□□□ 0.06
SIRPA-204ENST00000622179 NGLY1Q96IV0 654 aa15.42■□□□□ 0.06
SIRPA-204ENST00000622179 IPO7O95373 1038 aaKnown RBP15.41■□□□□ 0.06
SIRPA-204ENST00000622179 TPCN1Q9ULQ1 816 aa15.41■□□□□ 0.06
SIRPA-204ENST00000622179 ITGA6P23229 1130 aa15.41■□□□□ 0.06
SIRPA-204ENST00000622179 MAP7D2Q96T17 732 aa15.41■□□□□ 0.06
SIRPA-204ENST00000622179 ALG1Q9BT22 464 aa15.41■□□□□ 0.06
SIRPA-204ENST00000622179 TRMT1Q9NXH9 659 aaKnown RBP15.41■□□□□ 0.06
SIRPA-204ENST00000622179 SLAIN2Q9P270 581 aa15.41■□□□□ 0.06
SIRPA-204ENST00000622179 MROH1Q8NDA8 1641 aa15.41■□□□□ 0.06
SIRPA-204ENST00000622179 CCDC196A0A1B0GTZ2 297 aa15.41■□□□□ 0.06
SIRPA-204ENST00000622179 PI4K2BQ8TCG2 481 aa15.41■□□□□ 0.06
SIRPA-204ENST00000622179 SSH2Q76I76 1423 aa15.41■□□□□ 0.06
SIRPA-204ENST00000622179 ZBTB43O43298 467 aa15.41■□□□□ 0.06
SIRPA-204ENST00000622179 POLA2Q14181 598 aa15.41■□□□□ 0.06
SIRPA-204ENST00000622179 DDB1Q16531 1140 aa15.41■□□□□ 0.06
SIRPA-204ENST00000622179 STX1AQ16623 288 aa15.41■□□□□ 0.06
SIRPA-204ENST00000622179 LUZP1Q86V48 1076 aa15.41■□□□□ 0.06
SIRPA-204ENST00000622179 DBNLQ9UJU6 430 aaKnown RBP15.41■□□□□ 0.06
SIRPA-204ENST00000622179 NOL7Q9UMY1 257 aaKnown RBP15.41■□□□□ 0.06
SIRPA-204ENST00000622179 FSD2A1L4K1 749 aa15.4■□□□□ 0.06
SIRPA-204ENST00000622179 SMTNL1A8MU46 457 aa15.4■□□□□ 0.06
SIRPA-204ENST00000622179 TXLNAP40222 546 aa15.4■□□□□ 0.06
SIRPA-204ENST00000622179 CCDC152Q4G0S7 254 aa15.4■□□□□ 0.06
SIRPA-204ENST00000622179 CDC5LQ99459 802 aaKnown RBP15.4■□□□□ 0.06
SIRPA-204ENST00000622179 TM6SF1Q9BZW5 370 aa15.4■□□□□ 0.06
SIRPA-204ENST00000622179 HELLSQ9NRZ9 838 aa15.4■□□□□ 0.06
SIRPA-204ENST00000622179 ANKIB1Q9P2G1 1089 aa15.4■□□□□ 0.06
SIRPA-204ENST00000622179 LRRC24Q50LG9 513 aa15.4■□□□□ 0.06
SIRPA-204ENST00000622179 KLHL10Q6JEL2 608 aa15.4■□□□□ 0.06
SIRPA-204ENST00000622179 CCDC186Q7Z3E2 898 aa15.4■□□□□ 0.06
SIRPA-204ENST00000622179 IQCA1Q86XH1 822 aa15.4■□□□□ 0.06
SIRPA-204ENST00000622179 OTUD7BQ6GQQ9 843 aa15.4■□□□□ 0.06
SIRPA-204ENST00000622179 MIGA1Q8NAN2 632 aa15.4■□□□□ 0.06
SIRPA-204ENST00000622179 CNNM3Q8NE01 707 aa15.4■□□□□ 0.06
SIRPA-204ENST00000622179 SLC4A4Q9Y6R1 1079 aa15.39■□□□□ 0.06
SIRPA-204ENST00000622179 PPLO60437 1756 aa15.39■□□□□ 0.05
SIRPA-204ENST00000622179 CRB1P82279 1406 aa15.39■□□□□ 0.05
SIRPA-204ENST00000622179 EPB41L2O43491 1005 aaKnown RBP15.39■□□□□ 0.05
SIRPA-204ENST00000622179 SASH1O94885 1247 aa15.39■□□□□ 0.05
SIRPA-204ENST00000622179 RNF41Q9H4P4 317 aaPredicted RBP15.39■□□□□ 0.05
SIRPA-204ENST00000622179 ZSWIM6Q9HCJ5 1215 aa15.39■□□□□ 0.05
SIRPA-204ENST00000622179 CYP7A1P22680 504 aa15.39■□□□□ 0.05
SIRPA-204ENST00000622179 FILIP1LQ4L180 1135 aa15.39■□□□□ 0.05
SIRPA-204ENST00000622179 MTERF4Q7Z6M4 381 aaKnown RBP15.39■□□□□ 0.05
SIRPA-204ENST00000622179 USP5P45974 858 aa15.39■□□□□ 0.05
SIRPA-204ENST00000622179 MAGEB6Q8N7X4 407 aa15.39■□□□□ 0.05
SIRPA-204ENST00000622179 USP31Q70CQ4 1352 aa15.39■□□□□ 0.05
SIRPA-204ENST00000622179 NPHP4O75161 1426 aaPredicted RBP15.39■□□□□ 0.05
SIRPA-204ENST00000622179 SFPQP23246 707 aaKnown RBP eCLIP15.38■□□□□ 0.05
SIRPA-204ENST00000622179 DZIP1Q86YF9 867 aaKnown RBP15.38■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms