RNA–Protein interactions for RNA: ENST00000617185.4

TP53-222, Transcript of tumor protein p53, human

TSL 1 (best) BASIC

Gene TP53, Length 2,724 nt, Biotype protein coding, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TP53-222	ENST00000617185	HDGFL1	Q5TGJ6	251 aa		13.49	□□□□□ -0.25
TP53-222	ENST00000617185	ANKRD24	Q8TF21	1146 aa		13.49	□□□□□ -0.25
TP53-222	ENST00000617185	LTN1	O94822	1766 aa		13.49	□□□□□ -0.25
TP53-222	ENST00000617185	GOLIM4	O00461	696 aa		13.49	□□□□□ -0.25
TP53-222	ENST00000617185	DNAJC21	Q5F1R6	531 aa	Known RBP	13.49	□□□□□ -0.25
TP53-222	ENST00000617185	RGPD2	P0DJD1	1756 aa		13.49	□□□□□ -0.25
TP53-222	ENST00000617185	CCDC189	A1A4V9	331 aa		13.48	□□□□□ -0.25
TP53-222	ENST00000617185	SEC31A	O94979	1220 aa	Known RBP	13.48	□□□□□ -0.25
TP53-222	ENST00000617185	TRDN	Q13061	729 aa		13.48	□□□□□ -0.25
TP53-222	ENST00000617185	ANKRD44	Q8N8A2	993 aa		13.48	□□□□□ -0.25
TP53-222	ENST00000617185	LRRN4CL	Q8ND94	238 aa		13.48	□□□□□ -0.25
TP53-222	ENST00000617185	ATP10D	Q9P241	1426 aa		13.48	□□□□□ -0.25
TP53-222	ENST00000617185	SASH3	O75995	380 aa		13.48	□□□□□ -0.25
TP53-222	ENST00000617185	CCZ1B	P86790	482 aa		13.48	□□□□□ -0.25
TP53-222	ENST00000617185	CCZ1	P86791	482 aa	Predicted RBP	13.48	□□□□□ -0.25
TP53-222	ENST00000617185	CCDC158	Q5M9N0	1113 aa		13.48	□□□□□ -0.25
TP53-222	ENST00000617185	MRFAP1L1	Q96HT8	127 aa		13.48	□□□□□ -0.25
TP53-222	ENST00000617185	ZSCAN16	Q9H4T2	348 aa	Predicted RBP	13.48	□□□□□ -0.25
TP53-222	ENST00000617185	CCDC69	A6NI79	296 aa		13.48	□□□□□ -0.25
TP53-222	ENST00000617185	ZRSR1	Q15695	479 aa	Known RBP	13.48	□□□□□ -0.25
TP53-222	ENST00000617185	CCDC30	Q5VVM6	783 aa		13.48	□□□□□ -0.25
TP53-222	ENST00000617185	MKRN1	Q9UHC7	482 aa	Known RBP	13.48	□□□□□ -0.25
TP53-222	ENST00000617185	ADAMTSL3	P82987	1691 aa		13.47	□□□□□ -0.25
TP53-222	ENST00000617185	PNMA6E	A0A0J9YXQ4	647 aa		13.47	□□□□□ -0.25
TP53-222	ENST00000617185	SYT1	P21579	422 aa		13.47	□□□□□ -0.25
TP53-222	ENST00000617185	TEF	Q10587	303 aa		13.47	□□□□□ -0.25
TP53-222	ENST00000617185	EFCAB13	Q8IY85	973 aa		13.47	□□□□□ -0.25
TP53-222	ENST00000617185	SRRT	Q9BXP5	876 aa	Known RBP	13.47	□□□□□ -0.25
TP53-222	ENST00000617185	CHPF2	Q9P2E5	772 aa		13.47	□□□□□ -0.25
TP53-222	ENST00000617185	CAVIN2	O95810	425 aa		13.47	□□□□□ -0.25
TP53-222	ENST00000617185	ADRA2B	P18089	450 aa		13.47	□□□□□ -0.25
TP53-222	ENST00000617185	ZNF165	P49910	485 aa		13.47	□□□□□ -0.25
TP53-222	ENST00000617185	ARID5B	Q14865	1188 aa		13.47	□□□□□ -0.25
TP53-222	ENST00000617185	CC2D1A	Q6P1N0	951 aa	Predicted RBP	13.47	□□□□□ -0.25
TP53-222	ENST00000617185	SARM1	Q6SZW1	724 aa		13.47	□□□□□ -0.25
TP53-222	ENST00000617185	ARHGEF25	Q86VW2	580 aa		13.47	□□□□□ -0.25
TP53-222	ENST00000617185	KCNH5	Q8NCM2	988 aa		13.47	□□□□□ -0.25
TP53-222	ENST00000617185	TNMD	Q9H2S6	317 aa		13.47	□□□□□ -0.25
TP53-222	ENST00000617185	BTBD11	A6QL63	1104 aa		13.46	□□□□□ -0.25
TP53-222	ENST00000617185	MAP2K1	Q02750	393 aa	Predicted RBP	13.46	□□□□□ -0.25
TP53-222	ENST00000617185	IL17RA	Q96F46	866 aa		13.46	□□□□□ -0.25
TP53-222	ENST00000617185	CCDC34	Q96HJ3	373 aa		13.46	□□□□□ -0.25
TP53-222	ENST00000617185	EFCAB8	A8MWE9	144 aa		13.46	□□□□□ -0.26
TP53-222	ENST00000617185	PPP1R12A	O14974	1030 aa	Predicted RBP	13.46	□□□□□ -0.26
TP53-222	ENST00000617185	DNM1	Q05193	864 aa	Known RBP	13.46	□□□□□ -0.26
TP53-222	ENST00000617185	CAMK4	Q16566	473 aa		13.46	□□□□□ -0.26
TP53-222	ENST00000617185	LRCH2	Q5VUJ6	765 aa		13.46	□□□□□ -0.26
TP53-222	ENST00000617185	TMED8	Q6PL24	325 aa	Predicted RBP	13.46	□□□□□ -0.26
TP53-222	ENST00000617185	HOMEZ	Q8IX15	550 aa		13.46	□□□□□ -0.26
TP53-222	ENST00000617185	DNAAF4	Q8WXU2	420 aa		13.46	□□□□□ -0.26
TP53-222	ENST00000617185	NLRP2	Q9NX02	1062 aa		13.46	□□□□□ -0.26
TP53-222	ENST00000617185	PALD1	Q9ULE6	856 aa		13.46	□□□□□ -0.26
TP53-222	ENST00000617185	ATF3	P18847	181 aa		13.45	□□□□□ -0.26
TP53-222	ENST00000617185	CALR	P27797	417 aa	Known RBP	13.45	□□□□□ -0.26
TP53-222	ENST00000617185	ARFGAP3	Q9NP61	516 aa		13.45	□□□□□ -0.26
TP53-222	ENST00000617185	RBM28	Q9NW13	759 aa	Known RBP	13.45	□□□□□ -0.26
TP53-222	ENST00000617185	SLC39A6	Q13433	755 aa		13.45	□□□□□ -0.26
TP53-222	ENST00000617185	CKAP2L	Q8IYA6	745 aa		13.45	□□□□□ -0.26
TP53-222	ENST00000617185	RNF217	Q8TC41	542 aa		13.45	□□□□□ -0.26
TP53-222	ENST00000617185	C19orf44	Q9H6X5	657 aa		13.45	□□□□□ -0.26
TP53-222	ENST00000617185	NFAT5	O94916	1531 aa		13.45	□□□□□ -0.26
TP53-222	ENST00000617185	PXDN	Q92626	1479 aa		13.44	□□□□□ -0.26
TP53-222	ENST00000617185	PIP4K2A	P48426	406 aa	Predicted RBP	13.44	□□□□□ -0.26
TP53-222	ENST00000617185	UPF3B	Q9BZI7	483 aa	Known RBP	13.44	□□□□□ -0.26
TP53-222	ENST00000617185	PDRG1	Q9NUG6	133 aa		13.44	□□□□□ -0.26
TP53-222	ENST00000617185	TMEM94	Q12767	1356 aa		13.44	□□□□□ -0.26
TP53-222	ENST00000617185	GOLGA6L19	H0YKK7	550 aa		13.44	□□□□□ -0.26
TP53-222	ENST00000617185	TADA3	O75528	432 aa		13.44	□□□□□ -0.26
TP53-222	ENST00000617185	C1orf141	Q5JVX7	400 aa		13.44	□□□□□ -0.26
TP53-222	ENST00000617185	FAM212A	Q96EL1	285 aa		13.44	□□□□□ -0.26
TP53-222	ENST00000617185	ESYT1	Q9BSJ8	1104 aa		13.44	□□□□□ -0.26
TP53-222	ENST00000617185	PSD	A5PKW4	1024 aa	Predicted RBP	13.43	□□□□□ -0.26
TP53-222	ENST00000617185	CSB-PGBD3	P0DP91	1061 aa		13.43	□□□□□ -0.26
TP53-222	ENST00000617185	GSDMD	P57764	484 aa		13.43	□□□□□ -0.26
TP53-222	ENST00000617185	EIF4A1	P60842	406 aa	Known RBP	13.43	□□□□□ -0.26
TP53-222	ENST00000617185	PROSER3	Q2NL68	480 aa		13.43	□□□□□ -0.26
TP53-222	ENST00000617185	TADA2B	Q86TJ2	420 aa		13.43	□□□□□ -0.26
TP53-222	ENST00000617185	RPAP2	Q8IXW5	612 aa	Predicted RBP	13.43	□□□□□ -0.26
TP53-222	ENST00000617185	RBM43	Q6ZSC3	357 aa	Known RBP	13.43	□□□□□ -0.26
TP53-222	ENST00000617185	SGSM3	Q96HU1	749 aa		13.43	□□□□□ -0.26
TP53-222	ENST00000617185	PPP1R13B	Q96KQ4	1090 aa		13.43	□□□□□ -0.26
TP53-222	ENST00000617185	IL1RAPL2	Q9NP60	686 aa		13.43	□□□□□ -0.26
TP53-222	ENST00000617185	DDX19A	Q9NUU7	478 aa	Known RBP	13.43	□□□□□ -0.26
TP53-222	ENST00000617185	SMC3	Q9UQE7	1217 aa		13.43	□□□□□ -0.26
TP53-222	ENST00000617185	ZNF142	P52746	1687 aa	Predicted RBP	13.43	□□□□□ -0.26
TP53-222	ENST00000617185		A0A087WUV0	522 aa	Predicted RBP	13.42	□□□□□ -0.26
TP53-222	ENST00000617185	PI4KAP2	A4QPH2	592 aa		13.42	□□□□□ -0.26
TP53-222	ENST00000617185	GNAI2	P04899	355 aa		13.42	□□□□□ -0.26
TP53-222	ENST00000617185	USP8	P40818	1118 aa		13.42	□□□□□ -0.26
TP53-222	ENST00000617185	CCT4	P50991	539 aa	Known RBP	13.42	□□□□□ -0.26
TP53-222	ENST00000617185	AIMP1	Q12904	312 aa	Known RBP	13.42	□□□□□ -0.26
TP53-222	ENST00000617185	GORAB	Q5T7V8	394 aa		13.42	□□□□□ -0.26
TP53-222	ENST00000617185	PI4KAP1	Q8N8J0	262 aa		13.42	□□□□□ -0.26
TP53-222	ENST00000617185	FUT8	Q9BYC5	575 aa		13.42	□□□□□ -0.26
TP53-222	ENST00000617185	C1orf167	Q5SNV9	1468 aa		13.42	□□□□□ -0.26
TP53-222	ENST00000617185	LIG1	P18858	919 aa		13.42	□□□□□ -0.26
TP53-222	ENST00000617185	PLEKHO1	Q53GL0	409 aa	Predicted RBP	13.42	□□□□□ -0.26
TP53-222	ENST00000617185	FOXR1	Q6PIV2	292 aa		13.42	□□□□□ -0.26
TP53-222	ENST00000617185	GPR161	Q8N6U8	529 aa	Known RBP	13.42	□□□□□ -0.26
TP53-222	ENST00000617185	DNAJC25	Q9H1X3	360 aa		13.42	□□□□□ -0.26

Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms