RNA–Protein interactions for RNA: ENST00000616502.4

EPHB4-210, Transcript of EPH receptor B4, humanhuman

TSL 5 BASIC

Gene EPHB4, Length 3,737 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB4-210ENST00000616502 AP5Z1O43299 807 aa16.76■□□□□ 0.27
EPHB4-210ENST00000616502 SERPINC1P01008 464 aa16.76■□□□□ 0.27
EPHB4-210ENST00000616502 KSR2Q6VAB6 950 aa16.76■□□□□ 0.27
EPHB4-210ENST00000616502 HELBQ8NG08 1087 aaPredicted RBP16.76■□□□□ 0.27
EPHB4-210ENST00000616502 SLAIN2Q9P270 581 aa16.76■□□□□ 0.27
EPHB4-210ENST00000616502 SPTLC3Q9NUV7 552 aa16.75■□□□□ 0.27
EPHB4-210ENST00000616502 ANO10Q9NW15 660 aa16.75■□□□□ 0.27
EPHB4-210ENST00000616502 IQSEC3Q9UPP2 1182 aaPredicted RBP16.75■□□□□ 0.27
EPHB4-210ENST00000616502 ATP10DQ9P241 1426 aa16.75■□□□□ 0.27
EPHB4-210ENST00000616502 TAF3Q5VWG9 929 aa16.75■□□□□ 0.27
EPHB4-210ENST00000616502 TTLL7Q6ZT98 887 aa16.75■□□□□ 0.27
EPHB4-210ENST00000616502 NOL10Q9BSC4 688 aaKnown RBP16.75■□□□□ 0.27
EPHB4-210ENST00000616502 STX1AQ16623 288 aa16.75■□□□□ 0.27
EPHB4-210ENST00000616502 SLFNL1Q499Z3 407 aa16.75■□□□□ 0.27
EPHB4-210ENST00000616502 SYT10Q6XYQ8 523 aa16.75■□□□□ 0.27
EPHB4-210ENST00000616502 FAM89AQ96GI7 184 aa16.75■□□□□ 0.27
EPHB4-210ENST00000616502 CCDC171Q6TFL3 1326 aa16.74■□□□□ 0.27
EPHB4-210ENST00000616502 ZNF397Q8NF99 534 aaPredicted RBP16.74■□□□□ 0.27
EPHB4-210ENST00000616502 ZNF396Q96N95 335 aaPredicted RBP16.74■□□□□ 0.27
EPHB4-210ENST00000616502 HSP90AA4PQ58FG1 418 aa16.74■□□□□ 0.27
EPHB4-210ENST00000616502 TTLL5Q6EMB2 1281 aa16.74■□□□□ 0.27
EPHB4-210ENST00000616502 STAP2Q9UGK3 403 aa16.74■□□□□ 0.27
EPHB4-210ENST00000616502 CDK12Q9NYV4 1490 aaPredicted RBP16.74■□□□□ 0.27
EPHB4-210ENST00000616502 KIAA1210Q9ULL0 1709 aa16.74■□□□□ 0.27
EPHB4-210ENST00000616502 ZBTB22O15209 634 aa16.74■□□□□ 0.27
EPHB4-210ENST00000616502 TMCO3Q6UWJ1 677 aa16.74■□□□□ 0.27
EPHB4-210ENST00000616502 SHPRHQ149N8 1683 aa16.73■□□□□ 0.27
EPHB4-210ENST00000616502 SLU7O95391 586 aaKnown RBP16.73■□□□□ 0.27
EPHB4-210ENST00000616502 CHGBP05060 677 aa16.73■□□□□ 0.27
EPHB4-210ENST00000616502 POLR3DP05423 398 aaPredicted RBP16.73■□□□□ 0.27
EPHB4-210ENST00000616502 SNRPA1P09661 255 aaKnown RBP16.73■□□□□ 0.27
EPHB4-210ENST00000616502 TLR7Q9NYK1 1049 aaKnown RBP16.73■□□□□ 0.27
EPHB4-210ENST00000616502 SMIM5Q71RC9 77 aa16.73■□□□□ 0.27
EPHB4-210ENST00000616502 CCDC129Q6ZRS4 1044 aa16.73■□□□□ 0.27
EPHB4-210ENST00000616502 CHST3Q7LGC8 479 aa16.73■□□□□ 0.27
EPHB4-210ENST00000616502 PLCD3Q8N3E9 789 aa16.73■□□□□ 0.27
EPHB4-210ENST00000616502 TIGD1Q96MW7 591 aa16.73■□□□□ 0.27
EPHB4-210ENST00000616502 DNAI1Q9UI46 699 aa16.73■□□□□ 0.27
EPHB4-210ENST00000616502 GPS2Q13227 327 aa16.72■□□□□ 0.27
EPHB4-210ENST00000616502 CLSTN2Q9H4D0 955 aa16.72■□□□□ 0.27
EPHB4-210ENST00000616502 CFAP100Q494V2 611 aa16.72■□□□□ 0.27
EPHB4-210ENST00000616502 Q6ZUG5 572 aa16.72■□□□□ 0.27
EPHB4-210ENST00000616502 NEK1Q96PY6 1258 aa16.72■□□□□ 0.27
EPHB4-210ENST00000616502 MTMR7Q9Y216 660 aa16.72■□□□□ 0.27
EPHB4-210ENST00000616502 GOLIM4O00461 696 aa16.72■□□□□ 0.27
EPHB4-210ENST00000616502 SLC27A2O14975 620 aa16.72■□□□□ 0.27
EPHB4-210ENST00000616502 HAND2P61296 217 aa16.72■□□□□ 0.27
EPHB4-210ENST00000616502 SSH3Q8TE77 659 aa16.72■□□□□ 0.27
EPHB4-210ENST00000616502 ZSWIM4Q9H7M6 989 aa16.72■□□□□ 0.27
EPHB4-210ENST00000616502 ARHGEF10O15013 1369 aa16.72■□□□□ 0.27
EPHB4-210ENST00000616502 RPAP1Q9BWH6 1393 aaPredicted RBP16.71■□□□□ 0.27
EPHB4-210ENST00000616502 NPHP4O75161 1426 aaPredicted RBP16.71■□□□□ 0.27
EPHB4-210ENST00000616502 ARHGAP29Q52LW3 1261 aa16.71■□□□□ 0.27
EPHB4-210ENST00000616502 TMEM87AQ8NBN3 555 aa16.71■□□□□ 0.27
EPHB4-210ENST00000616502 CNNM1Q9NRU3 951 aa16.71■□□□□ 0.27
EPHB4-210ENST00000616502 CYP27B1O15528 508 aa16.71■□□□□ 0.27
EPHB4-210ENST00000616502 SLC4A8Q2Y0W8 1093 aa16.71■□□□□ 0.27
EPHB4-210ENST00000616502 ERBB3P21860 1342 aa16.71■□□□□ 0.26
EPHB4-210ENST00000616502 ATP2B1P20020 1258 aa16.7■□□□□ 0.26
EPHB4-210ENST00000616502 LMOD1P29536 600 aaPredicted RBP16.7■□□□□ 0.26
EPHB4-210ENST00000616502 BMS1Q14692 1282 aaKnown RBP16.7■□□□□ 0.26
EPHB4-210ENST00000616502 ERCC6LQ2NKX8 1250 aa16.7■□□□□ 0.26
EPHB4-210ENST00000616502 NEMFO60524 1076 aa16.7■□□□□ 0.26
EPHB4-210ENST00000616502 TFCP2Q12800 502 aa16.7■□□□□ 0.26
EPHB4-210ENST00000616502 SYNE4Q8N205 404 aa16.7■□□□□ 0.26
EPHB4-210ENST00000616502 SLC52A2Q9HAB3 445 aa16.7■□□□□ 0.26
EPHB4-210ENST00000616502 FTOQ9C0B1 505 aaKnown RBP eCLIP16.7■□□□□ 0.26
EPHB4-210ENST00000616502 CALCOCO1Q9P1Z2 691 aa16.7■□□□□ 0.26
EPHB4-210ENST00000616502 SSH2Q76I76 1423 aa16.69■□□□□ 0.26
EPHB4-210ENST00000616502 PHKG2P15735 406 aa16.69■□□□□ 0.26
EPHB4-210ENST00000616502 CCDC57Q2TAC2 916 aa16.69■□□□□ 0.26
EPHB4-210ENST00000616502 BEND3Q5T5X7 828 aa16.69■□□□□ 0.26
EPHB4-210ENST00000616502 PI4K2BQ8TCG2 481 aa16.69■□□□□ 0.26
EPHB4-210ENST00000616502 ASAP1Q9ULH1 1129 aa16.69■□□□□ 0.26
EPHB4-210ENST00000616502 KRT32Q14532 448 aa16.69■□□□□ 0.26
EPHB4-210ENST00000616502 TTC14Q96N46 770 aa16.69■□□□□ 0.26
EPHB4-210ENST00000616502 IFNKQ9P0W0 207 aa16.69■□□□□ 0.26
EPHB4-210ENST00000616502 CEP170BQ9Y4F5 1589 aaPredicted RBP16.69■□□□□ 0.26
EPHB4-210ENST00000616502 A0A1B0GVL5 298 aa16.69■□□□□ 0.26
EPHB4-210ENST00000616502 CCDC144BQ3MJ40 725 aa16.69■□□□□ 0.26
EPHB4-210ENST00000616502 DNAJC10Q8IXB1 793 aa16.69■□□□□ 0.26
EPHB4-210ENST00000616502 CCDC144CPQ8IYA2 1237 aa16.69■□□□□ 0.26
EPHB4-210ENST00000616502 ZSWIM6Q9HCJ5 1215 aa16.69■□□□□ 0.26
EPHB4-210ENST00000616502 DDX21Q9NR30 783 aaKnown RBP eCLIP16.69■□□□□ 0.26
EPHB4-210ENST00000616502 COL3A1P02461 1466 aaPredicted RBP16.68■□□□□ 0.26
EPHB4-210ENST00000616502 USP27XA6NNY8 438 aa16.68■□□□□ 0.26
EPHB4-210ENST00000616502 LRRC8AQ8IWT6 810 aa16.68■□□□□ 0.26
EPHB4-210ENST00000616502 GABPB1Q06547 395 aaPredicted RBP16.68■□□□□ 0.26
EPHB4-210ENST00000616502 LINS1Q8NG48 757 aa16.68■□□□□ 0.26
EPHB4-210ENST00000616502 SEC62Q99442 399 aaKnown RBP16.68■□□□□ 0.26
EPHB4-210ENST00000616502 CTAGE5O15320 804 aa16.67■□□□□ 0.26
EPHB4-210ENST00000616502 EPHA10Q5JZY3 1008 aa16.67■□□□□ 0.26
EPHB4-210ENST00000616502 NCOA5Q9HCD5 579 aaKnown RBP16.67■□□□□ 0.26
EPHB4-210ENST00000616502 TTC41PQ6P2S7 1318 aa16.67■□□□□ 0.26
EPHB4-210ENST00000616502 A0A0D9SFI3 127 aa16.67■□□□□ 0.26
EPHB4-210ENST00000616502 PDIA4P13667 645 aaKnown RBP16.67■□□□□ 0.26
EPHB4-210ENST00000616502 KIF6Q6ZMV9 814 aa16.67■□□□□ 0.26
EPHB4-210ENST00000616502 C11orf57Q6ZUT1 292 aaPredicted RBP16.67■□□□□ 0.26
EPHB4-210ENST00000616502 EAF2Q96CJ1 260 aaPredicted RBP16.67■□□□□ 0.26
EPHB4-210ENST00000616502 OVOS2A0A0J9YW53 1432 aa16.67■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 210.9 ms