RNA–Protein interactions for RNA: ENST00000614547.4

CDH5-208, Transcript of cadherin 5, humanhuman

TSL 1 (best) BASIC

Gene CDH5, Length 3,779 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH5-208ENST00000614547 TULP1O00294 542 aaPredicted RBP13.67□□□□□ -0.22
CDH5-208ENST00000614547 TRIM29Q14134 588 aa13.67□□□□□ -0.22
CDH5-208ENST00000614547 ARHGAP30Q7Z6I6 1101 aaPredicted RBP13.67□□□□□ -0.22
CDH5-208ENST00000614547 PNPLA6Q8IY17 1366 aa13.66□□□□□ -0.22
CDH5-208ENST00000614547 IBSPP21815 317 aaPredicted RBP13.66□□□□□ -0.22
CDH5-208ENST00000614547 UBE3BQ7Z3V4 1068 aa13.66□□□□□ -0.22
CDH5-208ENST00000614547 CCDC12Q8WUD4 166 aaPredicted RBP13.66□□□□□ -0.22
CDH5-208ENST00000614547 QRICH2Q9H0J4 1663 aa13.66□□□□□ -0.22
CDH5-208ENST00000614547 ABCA9Q8IUA7 1624 aa13.66□□□□□ -0.22
CDH5-208ENST00000614547 PRR36Q9H6K5 1346 aa13.66□□□□□ -0.22
CDH5-208ENST00000614547 KIDINS220Q9ULH0 1771 aa13.66□□□□□ -0.22
CDH5-208ENST00000614547 ZSCAN16Q9H4T2 348 aaPredicted RBP13.66□□□□□ -0.22
CDH5-208ENST00000614547 ORC3Q9UBD5 711 aaPredicted RBP13.66□□□□□ -0.22
CDH5-208ENST00000614547 KIAA0232Q92628 1395 aa13.66□□□□□ -0.22
CDH5-208ENST00000614547 ABCC3O15438 1527 aa13.66□□□□□ -0.22
CDH5-208ENST00000614547 HNRNPH2P55795 449 aaKnown RBP13.66□□□□□ -0.22
CDH5-208ENST00000614547 LZTFL1Q9NQ48 299 aa13.66□□□□□ -0.22
CDH5-208ENST00000614547 CWC15Q9P013 229 aaKnown RBP13.66□□□□□ -0.22
CDH5-208ENST00000614547 TTC41PQ6P2S7 1318 aa13.65□□□□□ -0.22
CDH5-208ENST00000614547 KIF1BO60333 1816 aa13.65□□□□□ -0.22
CDH5-208ENST00000614547 GOLGA8BA8MQT2 603 aa13.65□□□□□ -0.22
CDH5-208ENST00000614547 TRDNQ13061 729 aa13.65□□□□□ -0.22
CDH5-208ENST00000614547 RRP12Q5JTH9 1297 aaKnown RBP13.65□□□□□ -0.22
CDH5-208ENST00000614547 DHX37Q8IY37 1157 aaKnown RBP13.65□□□□□ -0.22
CDH5-208ENST00000614547 STRN4Q9NRL3 753 aa13.65□□□□□ -0.22
CDH5-208ENST00000614547 DBF4Q9UBU7 674 aaPredicted RBP13.65□□□□□ -0.22
CDH5-208ENST00000614547 SHPRHQ149N8 1683 aa13.65□□□□□ -0.22
CDH5-208ENST00000614547 ATF3P18847 181 aa13.65□□□□□ -0.22
CDH5-208ENST00000614547 GTF2E1P29083 439 aaPredicted RBP13.65□□□□□ -0.22
CDH5-208ENST00000614547 SPECC1Q5M775 1068 aa13.65□□□□□ -0.22
CDH5-208ENST00000614547 FUCA2Q9BTY2 467 aa13.65□□□□□ -0.22
CDH5-208ENST00000614547 CLCN6P51797 869 aa13.65□□□□□ -0.23
CDH5-208ENST00000614547 IRX5P78411 483 aaPredicted RBP13.65□□□□□ -0.23
CDH5-208ENST00000614547 DPCR1Q3MIW9 517 aa13.65□□□□□ -0.23
CDH5-208ENST00000614547 GJB4Q9NTQ9 266 aa13.65□□□□□ -0.23
CDH5-208ENST00000614547 ANKRD65E5RJM6 399 aa13.64□□□□□ -0.23
CDH5-208ENST00000614547 FAM160A1Q05DH4 1040 aa13.64□□□□□ -0.23
CDH5-208ENST00000614547 KIF4BQ2VIQ3 1234 aa13.64□□□□□ -0.23
CDH5-208ENST00000614547 SUCLG2Q96I99 432 aa13.64□□□□□ -0.23
CDH5-208ENST00000614547 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP13.64□□□□□ -0.23
CDH5-208ENST00000614547 SSH2Q76I76 1423 aa13.64□□□□□ -0.23
CDH5-208ENST00000614547 ROBO2Q9HCK4 1378 aa13.64□□□□□ -0.23
CDH5-208ENST00000614547 KAT6BQ8WYB5 2073 aa13.64□□□□□ -0.23
CDH5-208ENST00000614547 CTIFO43310 598 aaKnown RBP13.64□□□□□ -0.23
CDH5-208ENST00000614547 SLFN14P0C7P3 912 aa13.64□□□□□ -0.23
CDH5-208ENST00000614547 OAS2P29728 719 aaKnown RBP13.64□□□□□ -0.23
CDH5-208ENST00000614547 RASSF8Q8NHQ8 419 aa13.64□□□□□ -0.23
CDH5-208ENST00000614547 HECW2Q9P2P5 1572 aa13.64□□□□□ -0.23
CDH5-208ENST00000614547 PRAMEF22A3QJZ6 481 aa13.63□□□□□ -0.23
CDH5-208ENST00000614547 GRM8O00222 908 aa13.63□□□□□ -0.23
CDH5-208ENST00000614547 PROSER3Q2NL68 480 aa13.63□□□□□ -0.23
CDH5-208ENST00000614547 CPLX2Q6PUV4 134 aaKnown RBP13.63□□□□□ -0.23
CDH5-208ENST00000614547 CCDC150Q8NCX0 1101 aa13.63□□□□□ -0.23
CDH5-208ENST00000614547 RABEP2Q9H5N1 569 aa13.63□□□□□ -0.23
CDH5-208ENST00000614547 ARFGAP3Q9NP61 516 aa13.63□□□□□ -0.23
CDH5-208ENST00000614547 VPS18Q9P253 973 aa13.63□□□□□ -0.23
CDH5-208ENST00000614547 ARHGEF40Q8TER5 1519 aa13.63□□□□□ -0.23
CDH5-208ENST00000614547 TTC5Q8N0Z6 440 aa13.63□□□□□ -0.23
CDH5-208ENST00000614547 DESI2Q9BSY9 194 aa13.63□□□□□ -0.23
CDH5-208ENST00000614547 U3KPZ7 1027 aaPredicted RBP13.63□□□□□ -0.23
CDH5-208ENST00000614547 EDC4Q6P2E9 1401 aaKnown RBP13.63□□□□□ -0.23
CDH5-208ENST00000614547 RHOXF2BP0C7M4 288 aa13.63□□□□□ -0.23
CDH5-208ENST00000614547 TFCP2Q12800 502 aa13.63□□□□□ -0.23
CDH5-208ENST00000614547 PLA2G4DQ86XP0 818 aa13.63□□□□□ -0.23
CDH5-208ENST00000614547 RHOXF2Q9BQY4 288 aa13.63□□□□□ -0.23
CDH5-208ENST00000614547 NECTIN1Q15223 517 aa13.62□□□□□ -0.23
CDH5-208ENST00000614547 LRRN4CLQ8ND94 238 aa13.62□□□□□ -0.23
CDH5-208ENST00000614547 PPP1R13BQ96KQ4 1090 aa13.62□□□□□ -0.23
CDH5-208ENST00000614547 DBNDD2Q9BQY9 259 aa13.62□□□□□ -0.23
CDH5-208ENST00000614547 RSPH14Q9UHP6 348 aa13.62□□□□□ -0.23
CDH5-208ENST00000614547 KLF18A0A0U1RQI7 1052 aa13.62□□□□□ -0.23
CDH5-208ENST00000614547 CAVIN2O95810 425 aa13.62□□□□□ -0.23
CDH5-208ENST00000614547 FANCCQ00597 558 aa13.62□□□□□ -0.23
CDH5-208ENST00000614547 TM6SF1Q9BZW5 370 aa13.62□□□□□ -0.23
CDH5-208ENST00000614547 PHF8Q9UPP1 1060 aa13.62□□□□□ -0.23
CDH5-208ENST00000614547 CCP110O43303 1012 aa13.62□□□□□ -0.23
CDH5-208ENST00000614547 SCRN1Q12765 414 aa13.62□□□□□ -0.23
CDH5-208ENST00000614547 PLEKHO1Q53GL0 409 aaPredicted RBP13.62□□□□□ -0.23
CDH5-208ENST00000614547 TET3O43151 1660 aa13.62□□□□□ -0.23
CDH5-208ENST00000614547 SPTLC2O15270 562 aa13.61□□□□□ -0.23
CDH5-208ENST00000614547 ZSCAN12O43309 604 aa13.61□□□□□ -0.23
CDH5-208ENST00000614547 ATP1A3P13637 1013 aa13.61□□□□□ -0.23
CDH5-208ENST00000614547 SYKP43405 635 aa13.61□□□□□ -0.23
CDH5-208ENST00000614547 NDUFA8P51970 172 aa13.61□□□□□ -0.23
CDH5-208ENST00000614547 AKAP17AQ02040 695 aaKnown RBP13.61□□□□□ -0.23
CDH5-208ENST00000614547 AXDND1Q5T1B0 1012 aaPredicted RBP13.61□□□□□ -0.23
CDH5-208ENST00000614547 JAKMIP3Q5VZ66 844 aa13.61□□□□□ -0.23
CDH5-208ENST00000614547 CNNM3Q8NE01 707 aa13.61□□□□□ -0.23
CDH5-208ENST00000614547 MAP4K1Q92918 833 aa13.61□□□□□ -0.23
CDH5-208ENST00000614547 GOLPH3LQ9H4A5 285 aa13.61□□□□□ -0.23
CDH5-208ENST00000614547 CAPN2P17655 700 aa13.61□□□□□ -0.23
CDH5-208ENST00000614547 TIMM10P62072 90 aa13.61□□□□□ -0.23
CDH5-208ENST00000614547 GPHNQ9NQX3 736 aaPredicted RBP13.61□□□□□ -0.23
CDH5-208ENST00000614547 AOX1Q06278 1338 aa13.61□□□□□ -0.23
CDH5-208ENST00000614547 TCHHQ07283 1943 aa13.61□□□□□ -0.23
CDH5-208ENST00000614547 EFCAB6Q5THR3 1501 aa13.61□□□□□ -0.23
CDH5-208ENST00000614547 PPRC1Q5VV67 1664 aaKnown RBP13.61□□□□□ -0.23
CDH5-208ENST00000614547 MICU3Q86XE3 530 aa13.61□□□□□ -0.23
CDH5-208ENST00000614547 HMG20BQ9P0W2 317 aa13.61□□□□□ -0.23
CDH5-208ENST00000614547 MORC2Q9Y6X9 1032 aaPredicted RBP13.61□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms