RNA–Protein interactions for RNA: ENST00000614090.1

PTPN20CP-201, Transcript of protein tyrosine phosphatase, non-receptor type 20C, pseudogene, humanhuman

BASIC

Gene PTPN20CP, Length 920 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20CP-201ENST00000614090 ZNF280AP59817 542 aaPredicted RBP16.69■□□□□ 0.26
PTPN20CP-201ENST00000614090 SCARF1Q14162 830 aa16.69■□□□□ 0.26
PTPN20CP-201ENST00000614090 OTOP1Q7RTM1 612 aa16.69■□□□□ 0.26
PTPN20CP-201ENST00000614090 EYA3Q99504 573 aa16.69■□□□□ 0.26
PTPN20CP-201ENST00000614090 R3HDMLQ9H3Y0 253 aa16.69■□□□□ 0.26
PTPN20CP-201ENST00000614090 MIS18AQ9NYP9 233 aa16.69■□□□□ 0.26
PTPN20CP-201ENST00000614090 A0A0C4DFX4 3053 aa16.68■□□□□ 0.26
PTPN20CP-201ENST00000614090 PER1O15534 1290 aaPredicted RBP16.68■□□□□ 0.26
PTPN20CP-201ENST00000614090 ALDH1A1P00352 501 aa16.68■□□□□ 0.26
PTPN20CP-201ENST00000614090 PNISRQ8TF01 805 aaKnown RBP16.68■□□□□ 0.26
PTPN20CP-201ENST00000614090 NECTIN2Q92692 538 aa16.68■□□□□ 0.26
PTPN20CP-201ENST00000614090 POLLQ9UGP5 575 aa16.68■□□□□ 0.26
PTPN20CP-201ENST00000614090 NSFL1CQ9UNZ2 370 aaKnown RBP16.68■□□□□ 0.26
PTPN20CP-201ENST00000614090 C6orf229H3BNL8 230 aa16.67■□□□□ 0.26
PTPN20CP-201ENST00000614090 EN2P19622 333 aaPredicted RBP16.67■□□□□ 0.26
PTPN20CP-201ENST00000614090 EIF4A1P60842 406 aaKnown RBP16.67■□□□□ 0.26
PTPN20CP-201ENST00000614090 DOK7Q18PE1 504 aa16.67■□□□□ 0.26
PTPN20CP-201ENST00000614090 ARMC5Q96C12 935 aa16.67■□□□□ 0.26
PTPN20CP-201ENST00000614090 RANBP2P49792 3224 aaKnown RBP16.67■□□□□ 0.26
PTPN20CP-201ENST00000614090 MKRN3Q13064 507 aaKnown RBP16.66■□□□□ 0.26
PTPN20CP-201ENST00000614090 NLRP10Q86W26 655 aa16.66■□□□□ 0.26
PTPN20CP-201ENST00000614090 SLC17A8Q8NDX2 589 aa16.66■□□□□ 0.26
PTPN20CP-201ENST00000614090 AGBL3Q8NEM8 1001 aa16.66■□□□□ 0.26
PTPN20CP-201ENST00000614090 SH3TC1Q8TE82 1336 aa16.66■□□□□ 0.26
PTPN20CP-201ENST00000614090 TTLL12Q14166 644 aaPredicted RBP16.65■□□□□ 0.26
PTPN20CP-201ENST00000614090 HSP90AB3PQ58FF7 597 aa16.65■□□□□ 0.26
PTPN20CP-201ENST00000614090 LRP10Q7Z4F1 713 aa16.65■□□□□ 0.26
PTPN20CP-201ENST00000614090 PTPN22Q9Y2R2 807 aa16.65■□□□□ 0.26
PTPN20CP-201ENST00000614090 COL4A1P02462 1669 aa16.65■□□□□ 0.26
PTPN20CP-201ENST00000614090 NF2P35240 595 aa16.64■□□□□ 0.25
PTPN20CP-201ENST00000614090 GPSM2P81274 684 aa16.64■□□□□ 0.25
PTPN20CP-201ENST00000614090 TCIRG1Q13488 830 aa16.64■□□□□ 0.25
PTPN20CP-201ENST00000614090 RSBN1LQ6PCB5 846 aaPredicted RBP16.64■□□□□ 0.25
PTPN20CP-201ENST00000614090 OTUD5Q96G74 571 aa16.64■□□□□ 0.25
PTPN20CP-201ENST00000614090 CFAP53Q96M91 514 aa16.64■□□□□ 0.25
PTPN20CP-201ENST00000614090 MYOZ2Q9NPC6 264 aa16.64■□□□□ 0.25
PTPN20CP-201ENST00000614090 TRMT112Q9UI30 125 aaKnown RBP16.64■□□□□ 0.25
PTPN20CP-201ENST00000614090 NUDCQ9Y266 331 aa16.64■□□□□ 0.25
PTPN20CP-201ENST00000614090 TBC1D16Q8TBP0 767 aa16.63■□□□□ 0.25
PTPN20CP-201ENST00000614090 CELF1Q92879 486 aaKnown RBP16.63■□□□□ 0.25
PTPN20CP-201ENST00000614090 ERO1AQ96HE7 468 aa16.63■□□□□ 0.25
PTPN20CP-201ENST00000614090 COL6A3P12111 3177 aa16.63■□□□□ 0.25
PTPN20CP-201ENST00000614090 SPRYD7Q5W111 196 aa16.62■□□□□ 0.25
PTPN20CP-201ENST00000614090 THUMPD2Q9BTF0 503 aaKnown RBP16.62■□□□□ 0.25
PTPN20CP-201ENST00000614090 TMEM106CQ9BVX2 250 aa16.62■□□□□ 0.25
PTPN20CP-201ENST00000614090 ZC3H12CQ9C0D7 883 aaKnown RBP16.62■□□□□ 0.25
PTPN20CP-201ENST00000614090 H0YGN5 161 aa16.61■□□□□ 0.25
PTPN20CP-201ENST00000614090 USP17L8P0C7I0 530 aa16.61■□□□□ 0.25
PTPN20CP-201ENST00000614090 U2AF1L5P0DN76 240 aaPredicted RBP16.61■□□□□ 0.25
PTPN20CP-201ENST00000614090 U2AF1Q01081 240 aaKnown RBP eCLIP16.61■□□□□ 0.25
PTPN20CP-201ENST00000614090 PDIA6Q15084 440 aa16.61■□□□□ 0.25
PTPN20CP-201ENST00000614090 PRAMEF18Q5VWM3 479 aa16.61■□□□□ 0.25
PTPN20CP-201ENST00000614090 GMLQ99445 158 aa16.61■□□□□ 0.25
PTPN20CP-201ENST00000614090 SCAF8Q9UPN6 1271 aaKnown RBP16.61■□□□□ 0.25
PTPN20CP-201ENST00000614090 ZNF646O15015 1829 aaPredicted RBP16.61■□□□□ 0.25
PTPN20CP-201ENST00000614090 MANSC4A6NHS7 340 aaPredicted RBP16.6■□□□□ 0.25
PTPN20CP-201ENST00000614090 G3V3G9 751 aa16.6■□□□□ 0.25
PTPN20CP-201ENST00000614090 INHBEP58166 350 aa16.6■□□□□ 0.25
PTPN20CP-201ENST00000614090 PTPN12Q05209 780 aaKnown RBP16.6■□□□□ 0.25
PTPN20CP-201ENST00000614090 DCAF8Q5TAQ9 597 aa16.6■□□□□ 0.25
PTPN20CP-201ENST00000614090 ARMC9Q7Z3E5 817 aa16.6■□□□□ 0.25
PTPN20CP-201ENST00000614090 IFNL1Q8IU54 200 aa16.6■□□□□ 0.25
PTPN20CP-201ENST00000614090 SF3B3Q15393 1217 aaKnown RBP16.59■□□□□ 0.25
PTPN20CP-201ENST00000614090 ZNF333Q96JL9 665 aa16.59■□□□□ 0.25
PTPN20CP-201ENST00000614090 PODXL2Q9NZ53 605 aa16.59■□□□□ 0.25
PTPN20CP-201ENST00000614090 LDLRAD1Q5T700 205 aa16.58■□□□□ 0.24
PTPN20CP-201ENST00000614090 CHRDL2Q6WN34 429 aa16.58■□□□□ 0.24
PTPN20CP-201ENST00000614090 CD99L2Q8TCZ2 262 aa16.58■□□□□ 0.24
PTPN20CP-201ENST00000614090 EFCC1Q9HA90 598 aa16.58■□□□□ 0.24
PTPN20CP-201ENST00000614090 UFL1O94874 794 aa16.57■□□□□ 0.24
PTPN20CP-201ENST00000614090 PROSER3Q2NL68 480 aa16.57■□□□□ 0.24
PTPN20CP-201ENST00000614090 NBPF9Q3BBW0 867 aa16.57■□□□□ 0.24
PTPN20CP-201ENST00000614090 IGF2BP3O00425 579 aaKnown RBP eCLIP16.56■□□□□ 0.24
PTPN20CP-201ENST00000614090 ANXA1P04083 346 aa16.56■□□□□ 0.24
PTPN20CP-201ENST00000614090 ZBTB48P10074 688 aaPredicted RBP16.56■□□□□ 0.24
PTPN20CP-201ENST00000614090 USP17L3A6NCW0 530 aa16.55■□□□□ 0.24
PTPN20CP-201ENST00000614090 USP17L4A6NCW7 530 aa16.55■□□□□ 0.24
PTPN20CP-201ENST00000614090 RPS8P62241 208 aaKnown RBP16.55■□□□□ 0.24
PTPN20CP-201ENST00000614090 COPS6Q7L5N1 327 aa16.55■□□□□ 0.24
PTPN20CP-201ENST00000614090 USP17L1Q7RTZ2 530 aa16.55■□□□□ 0.24
PTPN20CP-201ENST00000614090 RBM27Q9P2N5 1060 aaKnown RBP16.55■□□□□ 0.24
PTPN20CP-201ENST00000614090 GGA1Q9UJY5 639 aa16.55■□□□□ 0.24
PTPN20CP-201ENST00000614090 COL1A1P02452 1464 aaPredicted RBP16.54■□□□□ 0.24
PTPN20CP-201ENST00000614090 CLSPNQ9HAW4 1339 aa16.54■□□□□ 0.24
PTPN20CP-201ENST00000614090 WNT10BO00744 389 aa16.54■□□□□ 0.24
PTPN20CP-201ENST00000614090 EIF2S2P20042 333 aaKnown RBP16.54■□□□□ 0.24
PTPN20CP-201ENST00000614090 CNGB1Q14028 1251 aaPredicted RBP16.54■□□□□ 0.24
PTPN20CP-201ENST00000614090 NBPF11Q86T75 865 aa16.54■□□□□ 0.24
PTPN20CP-201ENST00000614090 XAGE3Q8WTP9 111 aa16.54■□□□□ 0.24
PTPN20CP-201ENST00000614090 ANKIB1Q9P2G1 1089 aa16.54■□□□□ 0.24
PTPN20CP-201ENST00000614090 ANGEL1Q9UNK9 670 aaKnown RBP16.54■□□□□ 0.24
PTPN20CP-201ENST00000614090 ECM29Q5VYK3 1845 aa16.54■□□□□ 0.24
PTPN20CP-201ENST00000614090 MNX1P50219 401 aaPredicted RBP16.53■□□□□ 0.24
PTPN20CP-201ENST00000614090 SP3Q02447 781 aa16.53■□□□□ 0.24
PTPN20CP-201ENST00000614090 AIMP1Q12904 312 aaKnown RBP16.53■□□□□ 0.24
PTPN20CP-201ENST00000614090 CRHR2Q13324 411 aa16.53■□□□□ 0.24
PTPN20CP-201ENST00000614090 PRKG1Q13976 671 aa16.53■□□□□ 0.24
PTPN20CP-201ENST00000614090 SLC4A8Q2Y0W8 1093 aa16.53■□□□□ 0.24
PTPN20CP-201ENST00000614090 SLC9C1Q4G0N8 1177 aa16.53■□□□□ 0.24
PTPN20CP-201ENST00000614090 APOBEC3FQ8IUX4 373 aaKnown RBP16.53■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms