RNA–Protein interactions for RNA: ENST00000612303.1

NEAT1-204, nuclear paraspeckle assembly transcript 1, humanhuman

TSL 3 BASIC

Gene NEAT1, Length 572 nt, Biotype lincRNA, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEAT1-204ENST00000612303 DDX46Q7L014 1031 aaKnown RBP16.29■□□□□ 0.2
NEAT1-204ENST00000612303 VGLL2Q8N8G2 317 aa16.29■□□□□ 0.2
NEAT1-204ENST00000612303 DBNLQ9UJU6 430 aaKnown RBP16.29■□□□□ 0.2
NEAT1-204ENST00000612303 PARP3Q9Y6F1 533 aa16.29■□□□□ 0.2
NEAT1-204ENST00000612303 ZNF609O15014 1411 aa16.28■□□□□ 0.2
NEAT1-204ENST00000612303 A0A1B0GUL7 405 aa16.28■□□□□ 0.2
NEAT1-204ENST00000612303 CDC45O75419 566 aa16.28■□□□□ 0.2
NEAT1-204ENST00000612303 MMP10P09238 476 aa16.28■□□□□ 0.2
NEAT1-204ENST00000612303 CRY2Q49AN0 593 aa16.28■□□□□ 0.2
NEAT1-204ENST00000612303 BRIP1Q9BX63 1249 aa16.28■□□□□ 0.2
NEAT1-204ENST00000612303 TNRC6CQ9HCJ0 1690 aaKnown RBP16.27■□□□□ 0.2
NEAT1-204ENST00000612303 TIMM10P62072 90 aa16.27■□□□□ 0.2
NEAT1-204ENST00000612303 ATP2B3Q16720 1220 aa16.27■□□□□ 0.2
NEAT1-204ENST00000612303 TSHZ3Q63HK5 1081 aa16.27■□□□□ 0.2
NEAT1-204ENST00000612303 CCDC24Q8N4L8 307 aa16.27■□□□□ 0.2
NEAT1-204ENST00000612303 PPIL4Q8WUA2 492 aaKnown RBP eCLIP16.27■□□□□ 0.2
NEAT1-204ENST00000612303 NEUROD6Q96NK8 337 aa16.27■□□□□ 0.2
NEAT1-204ENST00000612303 DBNDD2Q9BQY9 259 aa16.27■□□□□ 0.2
NEAT1-204ENST00000612303 TLR7Q9NYK1 1049 aaKnown RBP16.27■□□□□ 0.2
NEAT1-204ENST00000612303 AK9Q5TCS8 1911 aa16.27■□□□□ 0.19
NEAT1-204ENST00000612303 SPEF2Q9C093 1822 aa16.26■□□□□ 0.19
NEAT1-204ENST00000612303 HOXA10P31260 410 aaPredicted RBP16.26■□□□□ 0.19
NEAT1-204ENST00000612303 PUM3Q15397 648 aaKnown RBP16.26■□□□□ 0.19
NEAT1-204ENST00000612303 LPIN2Q92539 896 aa16.26■□□□□ 0.19
NEAT1-204ENST00000612303 CELF1Q92879 486 aaKnown RBP16.26■□□□□ 0.19
NEAT1-204ENST00000612303 TAF1P21675 1872 aa16.26■□□□□ 0.19
NEAT1-204ENST00000612303 TRIM6-TRIM34B2RNG4 842 aa16.25■□□□□ 0.19
NEAT1-204ENST00000612303 FGFR2P21802 821 aa16.25■□□□□ 0.19
NEAT1-204ENST00000612303 CHRNDQ07001 517 aa16.25■□□□□ 0.19
NEAT1-204ENST00000612303 GRAPQ13588 217 aa16.25■□□□□ 0.19
NEAT1-204ENST00000612303 CASC1Q6TDU7 716 aa16.25■□□□□ 0.19
NEAT1-204ENST00000612303 TBC1D9Q6ZT07 1266 aa16.25■□□□□ 0.19
NEAT1-204ENST00000612303 TICAM2Q86XR7 235 aa16.25■□□□□ 0.19
NEAT1-204ENST00000612303 CNTROBQ8N137 903 aa16.25■□□□□ 0.19
NEAT1-204ENST00000612303 GRAPLQ8TC17 118 aaPredicted RBP16.25■□□□□ 0.19
NEAT1-204ENST00000612303 RPGRQ92834 1020 aaKnown RBP16.25■□□□□ 0.19
NEAT1-204ENST00000612303 UPF1Q92900 1129 aaKnown RBP eCLIP16.25■□□□□ 0.19
NEAT1-204ENST00000612303 XAGE2Q96GT9 111 aa16.25■□□□□ 0.19
NEAT1-204ENST00000612303 RBM17Q96I25 401 aaKnown RBP16.25■□□□□ 0.19
NEAT1-204ENST00000612303 CRAMP1Q96RY5 1269 aa16.25■□□□□ 0.19
NEAT1-204ENST00000612303 SLC5A1P13866 664 aa16.24■□□□□ 0.19
NEAT1-204ENST00000612303 PDE6BP35913 854 aa16.24■□□□□ 0.19
NEAT1-204ENST00000612303 CCDC158Q5M9N0 1113 aa16.24■□□□□ 0.19
NEAT1-204ENST00000612303 EVI5LQ96CN4 794 aa16.24■□□□□ 0.19
NEAT1-204ENST00000612303 ZNF512BQ96KM6 892 aaPredicted RBP16.24■□□□□ 0.19
NEAT1-204ENST00000612303 ANKRD2Q9GZV1 360 aa16.24■□□□□ 0.19
NEAT1-204ENST00000612303 MINPP1Q9UNW1 487 aa16.24■□□□□ 0.19
NEAT1-204ENST00000612303 RBM19Q9Y4C8 960 aaKnown RBP16.24■□□□□ 0.19
NEAT1-204ENST00000612303 ANKRD31Q8N7Z5 1873 aa16.24■□□□□ 0.19
NEAT1-204ENST00000612303 BBOX1O75936 387 aa16.23■□□□□ 0.19
NEAT1-204ENST00000612303 IFIT1P09914 478 aaKnown RBP16.23■□□□□ 0.19
NEAT1-204ENST00000612303 UBE4AQ14139 1066 aa16.23■□□□□ 0.19
NEAT1-204ENST00000612303 GORABQ5T7V8 394 aa16.23■□□□□ 0.19
NEAT1-204ENST00000612303 MSL1Q68DK7 614 aa16.23■□□□□ 0.19
NEAT1-204ENST00000612303 TMC4Q7Z404 712 aa16.23■□□□□ 0.19
NEAT1-204ENST00000612303 RILPL2Q969X0 211 aa16.23■□□□□ 0.19
NEAT1-204ENST00000612303 HAUS7Q99871 368 aa16.23■□□□□ 0.19
NEAT1-204ENST00000612303 A0A1B0GUL6 1792 aa16.23■□□□□ 0.19
NEAT1-204ENST00000612303 ARAP2Q8WZ64 1704 aa16.22■□□□□ 0.19
NEAT1-204ENST00000612303 HELBQ8NG08 1087 aaPredicted RBP16.22■□□□□ 0.19
NEAT1-204ENST00000612303 BOLA2Q9H3K6 86 aa16.22■□□□□ 0.19
NEAT1-204ENST00000612303 UPF2Q9HAU5 1272 aaKnown RBP16.22■□□□□ 0.19
NEAT1-204ENST00000612303 COL4A1P02462 1669 aa16.21■□□□□ 0.19
NEAT1-204ENST00000612303 NPR1P16066 1061 aa16.21■□□□□ 0.19
NEAT1-204ENST00000612303 HIP1O00291 1037 aa16.2■□□□□ 0.18
NEAT1-204ENST00000612303 TAF5LO75529 589 aa16.2■□□□□ 0.18
NEAT1-204ENST00000612303 SEC24BO95487 1268 aa16.2■□□□□ 0.18
NEAT1-204ENST00000612303 UQCRFS1P1P0C7P4 283 aa16.2■□□□□ 0.18
NEAT1-204ENST00000612303 SRGNP10124 158 aa16.2■□□□□ 0.18
NEAT1-204ENST00000612303 CHMLP26374 656 aa16.2■□□□□ 0.18
NEAT1-204ENST00000612303 ADORA1P30542 326 aa16.2■□□□□ 0.18
NEAT1-204ENST00000612303 TTC39AQ5SRH9 613 aa16.2■□□□□ 0.18
NEAT1-204ENST00000612303 ALDH1B1P30837 517 aa16.19■□□□□ 0.18
NEAT1-204ENST00000612303 RFX7Q2KHR2 1363 aa16.18■□□□□ 0.18
NEAT1-204ENST00000612303 ZBTB22O15209 634 aa16.18■□□□□ 0.18
NEAT1-204ENST00000612303 MAP4K4O95819 1239 aaPredicted RBP16.18■□□□□ 0.18
NEAT1-204ENST00000612303 MASTLQ96GX5 879 aa16.18■□□□□ 0.18
NEAT1-204ENST00000612303 LEMD3Q9Y2U8 911 aa16.18■□□□□ 0.18
NEAT1-204ENST00000612303 AKAP11Q9UKA4 1901 aa16.17■□□□□ 0.18
NEAT1-204ENST00000612303 ARID4AP29374 1257 aaPredicted RBP16.17■□□□□ 0.18
NEAT1-204ENST00000612303 CCDC102BQ68D86 513 aa16.17■□□□□ 0.18
NEAT1-204ENST00000612303 STYK1Q6J9G0 422 aa16.17■□□□□ 0.18
NEAT1-204ENST00000612303 RUFY2Q8WXA3 655 aa16.17■□□□□ 0.18
NEAT1-204ENST00000612303 PDGFDQ9GZP0 370 aaPredicted RBP16.17■□□□□ 0.18
NEAT1-204ENST00000612303 PAG1Q9NWQ8 432 aa16.17■□□□□ 0.18
NEAT1-204ENST00000612303 H0YIN7 160 aa16.16■□□□□ 0.18
NEAT1-204ENST00000612303 EPB41L2O43491 1005 aaKnown RBP16.16■□□□□ 0.18
NEAT1-204ENST00000612303 REC8O95072 547 aa16.16■□□□□ 0.18
NEAT1-204ENST00000612303 SP8Q8IXZ3 490 aa16.16■□□□□ 0.18
NEAT1-204ENST00000612303 KBTBD3Q8NAB2 608 aa16.16■□□□□ 0.18
NEAT1-204ENST00000612303 ESYT1Q9BSJ8 1104 aa16.16■□□□□ 0.18
NEAT1-204ENST00000612303 XDHP47989 1333 aa16.16■□□□□ 0.18
NEAT1-204ENST00000612303 PHKA1P46020 1223 aa16.15■□□□□ 0.18
NEAT1-204ENST00000612303 KCNJ4P48050 445 aa16.15■□□□□ 0.18
NEAT1-204ENST00000612303 MFAP1P55081 439 aaKnown RBP16.15■□□□□ 0.18
NEAT1-204ENST00000612303 LRRFIP1Q32MZ4 808 aaKnown RBP16.15■□□□□ 0.18
NEAT1-204ENST00000612303 CAVIN4Q5BKX8 364 aa16.15■□□□□ 0.18
NEAT1-204ENST00000612303 C15orf52Q6ZUT6 534 aaKnown RBP16.15■□□□□ 0.18
NEAT1-204ENST00000612303 C2CD5Q86YS7 1000 aa16.15■□□□□ 0.18
NEAT1-204ENST00000612303 DNAJC2Q99543 621 aaKnown RBP16.15■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 7.7 ms