RNA–Protein interactions for RNA: ENST00000608440.5

CTCFL-218, Transcript of CCCTC-binding factor like, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CTCFL, Length 2,749 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCFL-218ENST00000608440 MIEF2Q96C03 454 aa14.6□□□□□ -0.07
CTCFL-218ENST00000608440 ZSWIM4Q9H7M6 989 aa14.6□□□□□ -0.07
CTCFL-218ENST00000608440 IQCB1Q15051 598 aa14.59□□□□□ -0.07
CTCFL-218ENST00000608440 LRRFIP1Q32MZ4 808 aaKnown RBP14.59□□□□□ -0.07
CTCFL-218ENST00000608440 GPR161Q8N6U8 529 aaKnown RBP14.59□□□□□ -0.07
CTCFL-218ENST00000608440 TSPYL6Q8N831 410 aa14.59□□□□□ -0.07
CTCFL-218ENST00000608440 JMYQ8N9B5 988 aa14.59□□□□□ -0.07
CTCFL-218ENST00000608440 CNNM3Q8NE01 707 aa14.59□□□□□ -0.07
CTCFL-218ENST00000608440 RBM28Q9NW13 759 aaKnown RBP14.59□□□□□ -0.07
CTCFL-218ENST00000608440 CPA1P15085 419 aa14.59□□□□□ -0.07
CTCFL-218ENST00000608440 KCNA6P17658 529 aa14.59□□□□□ -0.07
CTCFL-218ENST00000608440 CALRP27797 417 aaKnown RBP14.59□□□□□ -0.07
CTCFL-218ENST00000608440 AK2P54819 239 aa14.59□□□□□ -0.07
CTCFL-218ENST00000608440 ANAPC15P60006 121 aa14.59□□□□□ -0.07
CTCFL-218ENST00000608440 FAXDC2Q96IV6 333 aa14.59□□□□□ -0.07
CTCFL-218ENST00000608440 LARGE1O95461 756 aa14.58□□□□□ -0.07
CTCFL-218ENST00000608440 KRT85P78386 507 aa14.58□□□□□ -0.07
CTCFL-218ENST00000608440 SARM1Q6SZW1 724 aa14.58□□□□□ -0.07
CTCFL-218ENST00000608440 HDGFL2Q7Z4V5 671 aaPredicted RBP14.58□□□□□ -0.07
CTCFL-218ENST00000608440 BICD2Q8TD16 824 aa14.58□□□□□ -0.07
CTCFL-218ENST00000608440 CLSTN2Q9H4D0 955 aa14.58□□□□□ -0.07
CTCFL-218ENST00000608440 PTCH1Q13635 1447 aa14.58□□□□□ -0.08
CTCFL-218ENST00000608440 SIPA1L2Q9P2F8 1722 aaPredicted RBP14.58□□□□□ -0.08
CTCFL-218ENST00000608440 CCDC102AQ96A19 550 aa14.58□□□□□ -0.08
CTCFL-218ENST00000608440 SUGCTQ9HAC7 445 aa14.58□□□□□ -0.08
CTCFL-218ENST00000608440 GTF3C5Q9Y5Q8 519 aaPredicted RBP14.58□□□□□ -0.08
CTCFL-218ENST00000608440 USP32Q8NFA0 1604 aa14.58□□□□□ -0.08
CTCFL-218ENST00000608440 INHBEP58166 350 aa14.57□□□□□ -0.08
CTCFL-218ENST00000608440 NUDT16Q96DE0 195 aaKnown RBP14.57□□□□□ -0.08
CTCFL-218ENST00000608440 KCND1Q9NSA2 647 aa14.57□□□□□ -0.08
CTCFL-218ENST00000608440 GNL3LQ9NVN8 582 aaKnown RBP14.57□□□□□ -0.08
CTCFL-218ENST00000608440 PARP3Q9Y6F1 533 aa14.57□□□□□ -0.08
CTCFL-218ENST00000608440 MPHOSPH10O00566 681 aaKnown RBP14.57□□□□□ -0.08
CTCFL-218ENST00000608440 USP8P40818 1118 aa14.57□□□□□ -0.08
CTCFL-218ENST00000608440 PDE1AP54750 535 aa14.57□□□□□ -0.08
CTCFL-218ENST00000608440 RUFY3Q7L099 469 aa14.57□□□□□ -0.08
CTCFL-218ENST00000608440 NBPF11Q86T75 865 aa14.57□□□□□ -0.08
CTCFL-218ENST00000608440 N4BP2L2Q92802 583 aaPredicted RBP14.57□□□□□ -0.08
CTCFL-218ENST00000608440 PRR36Q9H6K5 1346 aa14.57□□□□□ -0.08
CTCFL-218ENST00000608440 PPFIA4O75335 1185 aa14.57□□□□□ -0.08
CTCFL-218ENST00000608440 EIF5P55010 431 aaKnown RBP14.57□□□□□ -0.08
CTCFL-218ENST00000608440 GSDMDP57764 484 aa14.57□□□□□ -0.08
CTCFL-218ENST00000608440 SCRN1Q12765 414 aa14.57□□□□□ -0.08
CTCFL-218ENST00000608440 ARMCX5Q6P1M9 558 aa14.57□□□□□ -0.08
CTCFL-218ENST00000608440 TICAM2Q86XR7 235 aa14.57□□□□□ -0.08
CTCFL-218ENST00000608440 GGNBP2Q9H3C7 697 aa14.57□□□□□ -0.08
CTCFL-218ENST00000608440 DDX19AQ9NUU7 478 aaKnown RBP14.57□□□□□ -0.08
CTCFL-218ENST00000608440 XRN1Q8IZH2 1706 aaKnown RBP14.56□□□□□ -0.08
CTCFL-218ENST00000608440 PSDA5PKW4 1024 aaPredicted RBP14.56□□□□□ -0.08
CTCFL-218ENST00000608440 ELF1P32519 619 aa14.56□□□□□ -0.08
CTCFL-218ENST00000608440 GNAI1P63096 354 aa14.56□□□□□ -0.08
CTCFL-218ENST00000608440 TMC6Q7Z403 805 aa14.56□□□□□ -0.08
CTCFL-218ENST00000608440 CLIC6Q96NY7 704 aa14.56□□□□□ -0.08
CTCFL-218ENST00000608440 ATP7BP35670 1465 aa14.56□□□□□ -0.08
CTCFL-218ENST00000608440 EXOC5O00471 708 aa14.56□□□□□ -0.08
CTCFL-218ENST00000608440 MAP2K7O14733 419 aa14.56□□□□□ -0.08
CTCFL-218ENST00000608440 SFPQP23246 707 aaKnown RBP eCLIP14.56□□□□□ -0.08
CTCFL-218ENST00000608440 SETQ01105 290 aaPredicted RBP14.56□□□□□ -0.08
CTCFL-218ENST00000608440 ATP2B2Q01814 1243 aa14.56□□□□□ -0.08
CTCFL-218ENST00000608440 PPP2R3AQ06190 1150 aa14.56□□□□□ -0.08
CTCFL-218ENST00000608440 OS9Q13438 667 aaPredicted RBP14.56□□□□□ -0.08
CTCFL-218ENST00000608440 C11orf91Q3C1V1 193 aa14.56□□□□□ -0.08
CTCFL-218ENST00000608440 PHLPP2Q6ZVD8 1323 aa14.56□□□□□ -0.08
CTCFL-218ENST00000608440 SPATA32Q96LK8 384 aa14.56□□□□□ -0.08
CTCFL-218ENST00000608440 ADGRB2O60241 1585 aa14.55□□□□□ -0.08
CTCFL-218ENST00000608440 NPHP4O75161 1426 aaPredicted RBP14.55□□□□□ -0.08
CTCFL-218ENST00000608440 KRT24Q2M2I5 525 aa14.55□□□□□ -0.08
CTCFL-218ENST00000608440 ERC1Q8IUD2 1116 aa14.55□□□□□ -0.08
CTCFL-218ENST00000608440 SUGP2Q8IX01 1082 aaKnown RBP eCLIP14.55□□□□□ -0.08
CTCFL-218ENST00000608440 TBC1D22AQ8WUA7 517 aa14.55□□□□□ -0.08
CTCFL-218ENST00000608440 BORCS6Q96GS4 357 aa14.55□□□□□ -0.08
CTCFL-218ENST00000608440 PLEKHF1Q96S99 279 aa14.55□□□□□ -0.08
CTCFL-218ENST00000608440 IL25Q9H293 177 aa14.55□□□□□ -0.08
CTCFL-218ENST00000608440 LIMCH1Q9UPQ0 1083 aa14.55□□□□□ -0.08
CTCFL-218ENST00000608440 ABCC4O15439 1325 aa14.55□□□□□ -0.08
CTCFL-218ENST00000608440 TRIM65Q6PJ69 517 aa14.55□□□□□ -0.08
CTCFL-218ENST00000608440 CTCFLQ8NI51 663 aaPredicted RBP14.55□□□□□ -0.08
CTCFL-218ENST00000608440 RABEP2Q9H5N1 569 aa14.55□□□□□ -0.08
CTCFL-218ENST00000608440 VAMP4O75379 141 aa14.54□□□□□ -0.08
CTCFL-218ENST00000608440 CHMLP26374 656 aa14.54□□□□□ -0.08
CTCFL-218ENST00000608440 ANKRD44Q8N8A2 993 aa14.54□□□□□ -0.08
CTCFL-218ENST00000608440 RBM33Q96EV2 1170 aaKnown RBP14.54□□□□□ -0.08
CTCFL-218ENST00000608440 THUMPD2Q9BTF0 503 aaKnown RBP14.54□□□□□ -0.08
CTCFL-218ENST00000608440 FAM204AQ9H8W3 233 aa14.54□□□□□ -0.08
CTCFL-218ENST00000608440 CD248Q9HCU0 757 aa14.54□□□□□ -0.08
CTCFL-218ENST00000608440 CCDC61Q9Y6R9 512 aa14.54□□□□□ -0.08
CTCFL-218ENST00000608440 NSD2O96028 1365 aa14.54□□□□□ -0.08
CTCFL-218ENST00000608440 TTC41PQ6P2S7 1318 aa14.54□□□□□ -0.08
CTCFL-218ENST00000608440 TTC21BQ7Z4L5 1316 aa14.54□□□□□ -0.08
CTCFL-218ENST00000608440 FRMD3A2A2Y4 597 aa14.54□□□□□ -0.08
CTCFL-218ENST00000608440 KIF3CO14782 793 aa14.54□□□□□ -0.08
CTCFL-218ENST00000608440 SSR1P43307 286 aaKnown RBP14.54□□□□□ -0.08
CTCFL-218ENST00000608440 HSP90B2PQ58FF3 399 aa14.54□□□□□ -0.08
CTCFL-218ENST00000608440 CDC37L1Q7L3B6 337 aa14.54□□□□□ -0.08
CTCFL-218ENST00000608440 PIK3R4Q99570 1358 aa14.53□□□□□ -0.08
CTCFL-218ENST00000608440 KLHL33A6NCF5 533 aa14.53□□□□□ -0.08
CTCFL-218ENST00000608440 VPS53Q5VIR6 699 aa14.53□□□□□ -0.08
CTCFL-218ENST00000608440 RBM43Q6ZSC3 357 aaKnown RBP14.53□□□□□ -0.08
CTCFL-218ENST00000608440 AOPEPQ8N6M6 819 aa14.53□□□□□ -0.08
CTCFL-218ENST00000608440 ERCC4Q92889 916 aaPredicted RBP14.53□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms