RNA–Protein interactions for RNA: ENST00000600274.5

ARHGEF1-220, Transcript of Rho guanine nucleotide exchange factor 1, humanhuman

TSL 1 (best)

Gene ARHGEF1, Length 3,439 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF1-220ENST00000600274 PIP4K2BP78356 416 aa13.69□□□□□ -0.22
ARHGEF1-220ENST00000600274 ATG9AQ7Z3C6 839 aa13.69□□□□□ -0.22
ARHGEF1-220ENST00000600274 NCOA5Q9HCD5 579 aaKnown RBP13.69□□□□□ -0.22
ARHGEF1-220ENST00000600274 MTMR6Q9Y217 621 aa13.69□□□□□ -0.22
ARHGEF1-220ENST00000600274 ATP6V1DQ9Y5K8 247 aa13.69□□□□□ -0.22
ARHGEF1-220ENST00000600274 APOBRQ0VD83 1088 aa13.69□□□□□ -0.22
ARHGEF1-220ENST00000600274 CCDC158Q5M9N0 1113 aa13.69□□□□□ -0.22
ARHGEF1-220ENST00000600274 SH2B1Q9NRF2 756 aaPredicted RBP13.69□□□□□ -0.22
ARHGEF1-220ENST00000600274 ST3GAL1Q11201 340 aa13.68□□□□□ -0.22
ARHGEF1-220ENST00000600274 CCDC191Q8NCU4 936 aa13.68□□□□□ -0.22
ARHGEF1-220ENST00000600274 FBXW7Q969H0 707 aa13.68□□□□□ -0.22
ARHGEF1-220ENST00000600274 ZBTB1Q9Y2K1 713 aa13.68□□□□□ -0.22
ARHGEF1-220ENST00000600274 CAMTA1Q9Y6Y1 1673 aa13.68□□□□□ -0.22
ARHGEF1-220ENST00000600274 IDH1O75874 414 aaKnown RBP13.68□□□□□ -0.22
ARHGEF1-220ENST00000600274 KBTBD3Q8NAB2 608 aa13.68□□□□□ -0.22
ARHGEF1-220ENST00000600274 KCNQ4P56696 695 aa13.68□□□□□ -0.22
ARHGEF1-220ENST00000600274 RABL6Q3YEC7 729 aaPredicted RBP13.68□□□□□ -0.22
ARHGEF1-220ENST00000600274 HAUS7Q99871 368 aa13.68□□□□□ -0.22
ARHGEF1-220ENST00000600274 OVOS2A0A0G2JMS6 1433 aa13.68□□□□□ -0.22
ARHGEF1-220ENST00000600274 EXOC5O00471 708 aa13.67□□□□□ -0.22
ARHGEF1-220ENST00000600274 CASP7P55210 303 aa13.67□□□□□ -0.22
ARHGEF1-220ENST00000600274 BCL11BQ9C0K0 894 aaPredicted RBP13.67□□□□□ -0.22
ARHGEF1-220ENST00000600274 TCIRG1Q13488 830 aa13.67□□□□□ -0.22
ARHGEF1-220ENST00000600274 CKAP2LQ8IYA6 745 aa13.67□□□□□ -0.22
ARHGEF1-220ENST00000600274 BICD2Q8TD16 824 aa13.67□□□□□ -0.22
ARHGEF1-220ENST00000600274 XAGE2Q96GT9 111 aa13.67□□□□□ -0.22
ARHGEF1-220ENST00000600274 GPHNQ9NQX3 736 aaPredicted RBP13.67□□□□□ -0.22
ARHGEF1-220ENST00000600274 USP25Q9UHP3 1055 aa13.67□□□□□ -0.22
ARHGEF1-220ENST00000600274 TOB2Q14106 344 aaPredicted RBP13.67□□□□□ -0.22
ARHGEF1-220ENST00000600274 SCARF1Q14162 830 aa13.67□□□□□ -0.22
ARHGEF1-220ENST00000600274 GREM2Q9H772 168 aa13.67□□□□□ -0.22
ARHGEF1-220ENST00000600274 ATG3Q9NT62 314 aa13.67□□□□□ -0.22
ARHGEF1-220ENST00000600274 ZNF609O15014 1411 aa13.66□□□□□ -0.22
ARHGEF1-220ENST00000600274 ZAP70P43403 619 aa13.66□□□□□ -0.22
ARHGEF1-220ENST00000600274 TRPM3Q9HCF6 1732 aaPredicted RBP13.66□□□□□ -0.22
ARHGEF1-220ENST00000600274 COL15A1P39059 1388 aa13.66□□□□□ -0.22
ARHGEF1-220ENST00000600274 ZNF830Q96NB3 372 aaPredicted RBP13.66□□□□□ -0.22
ARHGEF1-220ENST00000600274 IQSEC3Q9UPP2 1182 aaPredicted RBP13.66□□□□□ -0.22
ARHGEF1-220ENST00000600274 U3KPZ7 1027 aaPredicted RBP13.66□□□□□ -0.22
ARHGEF1-220ENST00000600274 ANKRD1Q15327 319 aa13.65□□□□□ -0.22
ARHGEF1-220ENST00000600274 TM6SF1Q9BZW5 370 aa13.65□□□□□ -0.22
ARHGEF1-220ENST00000600274 SOS2Q07890 1332 aaPredicted RBP13.65□□□□□ -0.22
ARHGEF1-220ENST00000600274 PHF14O94880 888 aa13.65□□□□□ -0.22
ARHGEF1-220ENST00000600274 ITGA6P23229 1130 aa13.65□□□□□ -0.22
ARHGEF1-220ENST00000600274 KRT85P78386 507 aa13.65□□□□□ -0.22
ARHGEF1-220ENST00000600274 MAPK8IP2Q13387 824 aaPredicted RBP13.65□□□□□ -0.22
ARHGEF1-220ENST00000600274 TOMM22Q9NS69 142 aa13.65□□□□□ -0.22
ARHGEF1-220ENST00000600274 STOX1Q6ZVD7 989 aa13.65□□□□□ -0.22
ARHGEF1-220ENST00000600274 SMIM5Q71RC9 77 aa13.65□□□□□ -0.22
ARHGEF1-220ENST00000600274 IRS4O14654 1257 aaPredicted RBP13.64□□□□□ -0.23
ARHGEF1-220ENST00000600274 ATP2B3Q16720 1220 aa13.64□□□□□ -0.23
ARHGEF1-220ENST00000600274 BICDL1Q6ZP65 573 aa13.64□□□□□ -0.23
ARHGEF1-220ENST00000600274 SPATA32Q96LK8 384 aa13.64□□□□□ -0.23
ARHGEF1-220ENST00000600274 CPDO75976 1380 aa13.64□□□□□ -0.23
ARHGEF1-220ENST00000600274 KDM4FA0A1W2PPD8 638 aa13.64□□□□□ -0.23
ARHGEF1-220ENST00000600274 M0R2C6 588 aa13.64□□□□□ -0.23
ARHGEF1-220ENST00000600274 UBE2HP62256 183 aa13.64□□□□□ -0.23
ARHGEF1-220ENST00000600274 DZIP3Q86Y13 1208 aaKnown RBP13.64□□□□□ -0.23
ARHGEF1-220ENST00000600274 EPB41L2O43491 1005 aaKnown RBP13.64□□□□□ -0.23
ARHGEF1-220ENST00000600274 KRT32Q14532 448 aa13.64□□□□□ -0.23
ARHGEF1-220ENST00000600274 CCDC183Q5T5S1 534 aa13.64□□□□□ -0.23
ARHGEF1-220ENST00000600274 OSBP2Q969R2 916 aa13.64□□□□□ -0.23
ARHGEF1-220ENST00000600274 PRDM10Q9NQV6 1147 aa13.64□□□□□ -0.23
ARHGEF1-220ENST00000600274 HMG20BQ9P0W2 317 aa13.64□□□□□ -0.23
ARHGEF1-220ENST00000600274 C5P01031 1676 aa13.64□□□□□ -0.23
ARHGEF1-220ENST00000600274 COL5A2P05997 1499 aaPredicted RBP13.63□□□□□ -0.23
ARHGEF1-220ENST00000600274 KIF1AQ12756 1690 aa13.63□□□□□ -0.23
ARHGEF1-220ENST00000600274 HSPD1P10809 573 aaKnown RBP13.63□□□□□ -0.23
ARHGEF1-220ENST00000600274 OTUD7BQ6GQQ9 843 aa13.63□□□□□ -0.23
ARHGEF1-220ENST00000600274 FTOQ9C0B1 505 aaKnown RBP eCLIP13.63□□□□□ -0.23
ARHGEF1-220ENST00000600274 MED23Q9ULK4 1368 aa13.63□□□□□ -0.23
ARHGEF1-220ENST00000600274 MAST3O60307 1309 aa13.63□□□□□ -0.23
ARHGEF1-220ENST00000600274 RNF113AO15541 343 aaKnown RBP13.63□□□□□ -0.23
ARHGEF1-220ENST00000600274 RXRAP19793 462 aa13.63□□□□□ -0.23
ARHGEF1-220ENST00000600274 PDCP20941 246 aa13.63□□□□□ -0.23
ARHGEF1-220ENST00000600274 TTC6Q86TZ1 520 aa13.63□□□□□ -0.23
ARHGEF1-220ENST00000600274 USP54Q70EL1 1684 aa13.63□□□□□ -0.23
ARHGEF1-220ENST00000600274 CCDC144CPQ8IYA2 1237 aa13.62□□□□□ -0.23
ARHGEF1-220ENST00000600274 SPC24Q8NBT2 197 aa13.62□□□□□ -0.23
ARHGEF1-220ENST00000600274 LIG1P18858 919 aa13.62□□□□□ -0.23
ARHGEF1-220ENST00000600274 STRCP1A6NGW2 1772 aa13.62□□□□□ -0.23
ARHGEF1-220ENST00000600274 ANKRD18BA2A2Z9 1011 aa13.61□□□□□ -0.23
ARHGEF1-220ENST00000600274 RRP9O43818 475 aaKnown RBP13.61□□□□□ -0.23
ARHGEF1-220ENST00000600274 SCRN1Q12765 414 aa13.61□□□□□ -0.23
ARHGEF1-220ENST00000600274 CSPP1Q1MSJ5 1256 aa13.61□□□□□ -0.23
ARHGEF1-220ENST00000600274 SLC4A9Q96Q91 983 aa13.61□□□□□ -0.23
ARHGEF1-220ENST00000600274 E7EWF7 191 aa13.61□□□□□ -0.23
ARHGEF1-220ENST00000600274 ATP6V1AP38606 617 aa13.61□□□□□ -0.23
ARHGEF1-220ENST00000600274 SLC9C2Q5TAH2 1124 aa13.61□□□□□ -0.23
ARHGEF1-220ENST00000600274 RALYLQ86SE5 291 aaKnown RBP13.61□□□□□ -0.23
ARHGEF1-220ENST00000600274 ZSCAN30Q86W11 494 aa13.61□□□□□ -0.23
ARHGEF1-220ENST00000600274 DCCP43146 1447 aa13.61□□□□□ -0.23
ARHGEF1-220ENST00000600274 TCHHQ07283 1943 aa13.61□□□□□ -0.23
ARHGEF1-220ENST00000600274 CCDC24Q8N4L8 307 aa13.61□□□□□ -0.23
ARHGEF1-220ENST00000600274 PUS7LQ9H0K6 701 aaKnown RBP13.61□□□□□ -0.23
ARHGEF1-220ENST00000600274 DACT1Q9NYF0 836 aa13.61□□□□□ -0.23
ARHGEF1-220ENST00000600274 AKAP2Q9Y2D5 859 aa13.61□□□□□ -0.23
ARHGEF1-220ENST00000600274 ALS2Q96Q42 1657 aa13.6□□□□□ -0.23
ARHGEF1-220ENST00000600274 NLRP10Q86W26 655 aa13.6□□□□□ -0.23
ARHGEF1-220ENST00000600274 RRP12Q5JTH9 1297 aaKnown RBP13.6□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 61.1 ms