RNA–Protein interactions for RNA: ENST00000591383.1

VPS4B-205, Transcript of vacuolar protein sorting 4 homolog B, humanhuman

TSL 5

Gene VPS4B, Length 701 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS4B-205ENST00000591383 USP16Q9Y5T5 823 aa8.22□□□□□ -1.09
VPS4B-205ENST00000591383 NDUFB9Q9Y6M9 179 aa8.22□□□□□ -1.09
VPS4B-205ENST00000591383 TCERG1O14776 1098 aaKnown RBP8.21□□□□□ -1.1
VPS4B-205ENST00000591383 ZBTB7AO95365 584 aa8.21□□□□□ -1.1
VPS4B-205ENST00000591383 FDX1P10109 184 aa8.21□□□□□ -1.1
VPS4B-205ENST00000591383 SLFN5Q08AF3 891 aa8.21□□□□□ -1.1
VPS4B-205ENST00000591383 PROSER3Q2NL68 480 aa8.21□□□□□ -1.1
VPS4B-205ENST00000591383 RC3H1Q5TC82 1133 aaKnown RBP8.21□□□□□ -1.1
VPS4B-205ENST00000591383 STK31Q9BXU1 1019 aa8.21□□□□□ -1.1
VPS4B-205ENST00000591383 PDGFDQ9GZP0 370 aaPredicted RBP8.21□□□□□ -1.1
VPS4B-205ENST00000591383 AFDNP55196 1824 aaKnown RBP8.21□□□□□ -1.1
VPS4B-205ENST00000591383 ERBB4Q15303 1308 aa8.21□□□□□ -1.1
VPS4B-205ENST00000591383 LRP5O75197 1615 aa8.21□□□□□ -1.1
VPS4B-205ENST00000591383 COL24A1Q17RW2 1714 aa8.2□□□□□ -1.1
VPS4B-205ENST00000591383 RPS6KA4O75676 772 aa8.2□□□□□ -1.1
VPS4B-205ENST00000591383 RFC4P35249 363 aa8.2□□□□□ -1.1
VPS4B-205ENST00000591383 PROX2Q3B8N5 592 aa8.2□□□□□ -1.1
VPS4B-205ENST00000591383 NBPF10Q6P3W6 841 aaKnown RBP8.2□□□□□ -1.1
VPS4B-205ENST00000591383 KIF6Q6ZMV9 814 aa8.2□□□□□ -1.1
VPS4B-205ENST00000591383 NBPF15Q8N660 670 aa8.2□□□□□ -1.1
VPS4B-205ENST00000591383 SRP68Q9UHB9 627 aaKnown RBP8.2□□□□□ -1.1
VPS4B-205ENST00000591383 PCDHGC3Q9UN70 934 aa8.2□□□□□ -1.1
VPS4B-205ENST00000591383 CACNA1FO60840 1977 aa8.2□□□□□ -1.1
VPS4B-205ENST00000591383 USP42Q9H9J4 1324 aaKnown RBP8.2□□□□□ -1.1
VPS4B-205ENST00000591383 NUP98P52948 1817 aa8.19□□□□□ -1.1
VPS4B-205ENST00000591383 ZPR1O75312 459 aa8.19□□□□□ -1.1
VPS4B-205ENST00000591383 IL6STP40189 918 aaPredicted RBP8.19□□□□□ -1.1
VPS4B-205ENST00000591383 CTDSPL2Q05D32 466 aa8.19□□□□□ -1.1
VPS4B-205ENST00000591383 TRAPPC3LQ5T215 181 aa8.19□□□□□ -1.1
VPS4B-205ENST00000591383 CCDC30Q5VVM6 783 aa8.19□□□□□ -1.1
VPS4B-205ENST00000591383 DZIP3Q86Y13 1208 aaKnown RBP8.19□□□□□ -1.1
VPS4B-205ENST00000591383 COL23A1Q86Y22 540 aaPredicted RBP8.19□□□□□ -1.1
VPS4B-205ENST00000591383 FLAD1Q8NFF5 587 aa8.19□□□□□ -1.1
VPS4B-205ENST00000591383 ADAMTS19Q8TE59 1207 aa8.19□□□□□ -1.1
VPS4B-205ENST00000591383 BCL2L13Q9BXK5 485 aa8.19□□□□□ -1.1
VPS4B-205ENST00000591383 HMX1Q9NP08 348 aaPredicted RBP8.19□□□□□ -1.1
VPS4B-205ENST00000591383 SRCAPQ6ZRS2 3230 aa8.18□□□□□ -1.1
VPS4B-205ENST00000591383 N4BP2Q86UW6 1770 aaPredicted RBP8.18□□□□□ -1.1
VPS4B-205ENST00000591383 A0A087WZG4 1122 aa8.18□□□□□ -1.1
VPS4B-205ENST00000591383 SLC10A3P09131 477 aa8.18□□□□□ -1.1
VPS4B-205ENST00000591383 EIF5P55010 431 aaKnown RBP8.18□□□□□ -1.1
VPS4B-205ENST00000591383 AIMP1Q12904 312 aaKnown RBP8.18□□□□□ -1.1
VPS4B-205ENST00000591383 XAGE3Q8WTP9 111 aa8.18□□□□□ -1.1
VPS4B-205ENST00000591383 HLA-CQ95604 372 aa8.18□□□□□ -1.1
VPS4B-205ENST00000591383 TRIM34Q9BYJ4 488 aa8.18□□□□□ -1.1
VPS4B-205ENST00000591383 DDX21Q9NR30 783 aaKnown RBP eCLIP8.18□□□□□ -1.1
VPS4B-205ENST00000591383 SMC4Q9NTJ3 1288 aa8.18□□□□□ -1.1
VPS4B-205ENST00000591383 DBF4Q9UBU7 674 aaPredicted RBP8.18□□□□□ -1.1
VPS4B-205ENST00000591383 GPR37L1O60883 481 aa8.17□□□□□ -1.1
VPS4B-205ENST00000591383 GUCA2AQ02747 115 aa8.17□□□□□ -1.1
VPS4B-205ENST00000591383 WASHC4Q2M389 1173 aa8.17□□□□□ -1.1
VPS4B-205ENST00000591383 USPL1Q5W0Q7 1092 aa8.17□□□□□ -1.1
VPS4B-205ENST00000591383 TTLL7Q6ZT98 887 aa8.17□□□□□ -1.1
VPS4B-205ENST00000591383 CHMP4AQ9BY43 222 aa8.17□□□□□ -1.1
VPS4B-205ENST00000591383 MTFR1LQ9H019 292 aa8.17□□□□□ -1.1
VPS4B-205ENST00000591383 HYPKQ9NX55 129 aa8.17□□□□□ -1.1
VPS4B-205ENST00000591383 ZNF652Q9Y2D9 606 aa8.17□□□□□ -1.1
VPS4B-205ENST00000591383 NPHP1O15259 732 aa8.16□□□□□ -1.1
VPS4B-205ENST00000591383 CAMTA2O94983 1202 aa8.16□□□□□ -1.1
VPS4B-205ENST00000591383 GYS1P13807 737 aa8.16□□□□□ -1.1
VPS4B-205ENST00000591383 POLD1P28340 1107 aa8.16□□□□□ -1.1
VPS4B-205ENST00000591383 LAMB2P55268 1798 aa8.16□□□□□ -1.1
VPS4B-205ENST00000591383 PDE4CQ08493 712 aa8.16□□□□□ -1.1
VPS4B-205ENST00000591383 MAP3K15Q6ZN16 1313 aa8.16□□□□□ -1.1
VPS4B-205ENST00000591383 BICDL1Q6ZP65 573 aa8.16□□□□□ -1.1
VPS4B-205ENST00000591383 COPS6Q7L5N1 327 aa8.16□□□□□ -1.1
VPS4B-205ENST00000591383 PBXIP1Q96AQ6 731 aa8.16□□□□□ -1.1
VPS4B-205ENST00000591383 KCNK17Q96T54 332 aa8.16□□□□□ -1.1
VPS4B-205ENST00000591383 KIAA1468Q9P260 1216 aa8.16□□□□□ -1.1
VPS4B-205ENST00000591383 NARFQ9UHQ1 456 aa8.16□□□□□ -1.1
VPS4B-205ENST00000591383 COL11A2P13942 1736 aaPredicted RBP8.15□□□□□ -1.1
VPS4B-205ENST00000591383 TNRC6CQ9HCJ0 1690 aaKnown RBP8.15□□□□□ -1.1
VPS4B-205ENST00000591383 ATP10DQ9P241 1426 aa8.15□□□□□ -1.1
VPS4B-205ENST00000591383 CARMIL3Q8ND23 1372 aa8.15□□□□□ -1.1
VPS4B-205ENST00000591383 POTEB2H3BUK9 544 aa8.15□□□□□ -1.1
VPS4B-205ENST00000591383 VAMP4O75379 141 aa8.15□□□□□ -1.1
VPS4B-205ENST00000591383 DDX58O95786 925 aaKnown RBP8.15□□□□□ -1.1
VPS4B-205ENST00000591383 MMP10P09238 476 aa8.15□□□□□ -1.1
VPS4B-205ENST00000591383 GPTP24298 496 aa8.15□□□□□ -1.1
VPS4B-205ENST00000591383 FKBP5Q13451 457 aaPredicted RBP8.15□□□□□ -1.1
VPS4B-205ENST00000591383 MTMR2Q13614 643 aa8.15□□□□□ -1.1
VPS4B-205ENST00000591383 SWT1Q5T5J6 900 aaKnown RBP8.15□□□□□ -1.1
VPS4B-205ENST00000591383 TRMT2AQ8IZ69 625 aaKnown RBP8.15□□□□□ -1.1
VPS4B-205ENST00000591383 LRRN4Q8WUT4 740 aa8.15□□□□□ -1.1
VPS4B-205ENST00000591383 ZNF428Q96B54 188 aa8.15□□□□□ -1.1
VPS4B-205ENST00000591383 GZF1Q9H116 711 aaPredicted RBP8.15□□□□□ -1.1
VPS4B-205ENST00000591383 PHAXQ9H814 394 aaKnown RBP8.15□□□□□ -1.1
VPS4B-205ENST00000591383 SPON1Q9HCB6 807 aa8.15□□□□□ -1.1
VPS4B-205ENST00000591383 PPP1R1BQ9UD71 204 aaPredicted RBP8.15□□□□□ -1.1
VPS4B-205ENST00000591383 NRXN2Q9P2S2 1712 aa8.15□□□□□ -1.11
VPS4B-205ENST00000591383 PXDNLA1KZ92 1463 aa8.14□□□□□ -1.11
VPS4B-205ENST00000591383 ADCY9O60503 1353 aa8.14□□□□□ -1.11
VPS4B-205ENST00000591383 KIF16BQ96L93 1317 aa8.14□□□□□ -1.11
VPS4B-205ENST00000591383 FAM177BA6PVY3 158 aa8.14□□□□□ -1.11
VPS4B-205ENST00000591383 CT47B1P0C2W7 299 aaPredicted RBP8.14□□□□□ -1.11
VPS4B-205ENST00000591383 HOXB1P14653 301 aaPredicted RBP8.14□□□□□ -1.11
VPS4B-205ENST00000591383 RFX1P22670 979 aa8.14□□□□□ -1.11
VPS4B-205ENST00000591383 VAC14Q08AM6 782 aa8.14□□□□□ -1.11
VPS4B-205ENST00000591383 G2E3Q7L622 706 aa8.14□□□□□ -1.11
VPS4B-205ENST00000591383 LRP10Q7Z4F1 713 aa8.14□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms