RNA–Protein interactions for RNA: ENST00000586792.5

ZNF540-204, Transcript of zinc finger protein 540, humanhuman

TSL 3 BASIC

Gene ZNF540, Length 564 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF540-204ENST00000586792 SIK1P57059 783 aa8.23□□□□□ -1.09
ZNF540-204ENST00000586792 UVSSAQ2YD98 709 aa8.23□□□□□ -1.09
ZNF540-204ENST00000586792 ZC3HAV1Q7Z2W4 902 aaKnown RBP8.23□□□□□ -1.09
ZNF540-204ENST00000586792 DTX1Q86Y01 620 aa8.23□□□□□ -1.09
ZNF540-204ENST00000586792 DKK1O94907 266 aa8.22□□□□□ -1.09
ZNF540-204ENST00000586792 AGGF1Q8N302 714 aaeCLIP8.22□□□□□ -1.09
ZNF540-204ENST00000586792 UBL7Q96S82 380 aaPredicted RBP8.22□□□□□ -1.09
ZNF540-204ENST00000586792 EGFRP00533 1210 aa8.21□□□□□ -1.1
ZNF540-204ENST00000586792 PSAPP07602 524 aa8.21□□□□□ -1.1
ZNF540-204ENST00000586792 HINFPQ9BQA5 517 aa8.21□□□□□ -1.1
ZNF540-204ENST00000586792 DBNDD2Q9BQY9 259 aa8.21□□□□□ -1.1
ZNF540-204ENST00000586792 THOC2Q8NI27 1593 aaKnown RBP8.21□□□□□ -1.1
ZNF540-204ENST00000586792 MICAL2O94851 1124 aa8.2□□□□□ -1.1
ZNF540-204ENST00000586792 RNF43Q68DV7 783 aa8.2□□□□□ -1.1
ZNF540-204ENST00000586792 KLK14Q9P0G3 267 aa8.2□□□□□ -1.1
ZNF540-204ENST00000586792 PRDM2Q13029 1718 aa8.2□□□□□ -1.1
ZNF540-204ENST00000586792 CEP164Q9UPV0 1460 aa8.19□□□□□ -1.1
ZNF540-204ENST00000586792 J3QW42 95 aa8.19□□□□□ -1.1
ZNF540-204ENST00000586792 ADAMTS4O75173 837 aa8.19□□□□□ -1.1
ZNF540-204ENST00000586792 IGFBP4P22692 258 aa8.19□□□□□ -1.1
ZNF540-204ENST00000586792 ARMC10Q8N2F6 343 aa8.19□□□□□ -1.1
ZNF540-204ENST00000586792 PPME1Q9Y570 386 aa8.19□□□□□ -1.1
ZNF540-204ENST00000586792 RASA1P20936 1047 aa8.18□□□□□ -1.1
ZNF540-204ENST00000586792 SOX18P35713 384 aa8.18□□□□□ -1.1
ZNF540-204ENST00000586792 DGKZQ13574 1117 aa8.18□□□□□ -1.1
ZNF540-204ENST00000586792 UTP4Q969X6 686 aaKnown RBP8.18□□□□□ -1.1
ZNF540-204ENST00000586792 C7orf69Q9H7B7 122 aa8.18□□□□□ -1.1
ZNF540-204ENST00000586792 CFTRP13569 1480 aa8.18□□□□□ -1.1
ZNF540-204ENST00000586792 MRC2Q9UBG0 1479 aa8.18□□□□□ -1.1
ZNF540-204ENST00000586792 C11orf91Q3C1V1 193 aa8.17□□□□□ -1.1
ZNF540-204ENST00000586792 TRIM42Q8IWZ5 723 aa8.17□□□□□ -1.1
ZNF540-204ENST00000586792 ADGRE2Q9UHX3 823 aa8.17□□□□□ -1.1
ZNF540-204ENST00000586792 RTCBQ9Y3I0 505 aaKnown RBP8.17□□□□□ -1.1
ZNF540-204ENST00000586792 FANCD2Q9BXW9 1451 aa8.17□□□□□ -1.1
ZNF540-204ENST00000586792 CCDC88BA6NC98 1476 aa8.16□□□□□ -1.1
ZNF540-204ENST00000586792 PRR19A6NJB7 356 aa8.16□□□□□ -1.1
ZNF540-204ENST00000586792 RAD21O60216 631 aa8.16□□□□□ -1.1
ZNF540-204ENST00000586792 XYLBO75191 536 aa8.16□□□□□ -1.1
ZNF540-204ENST00000586792 HOXD8P13378 290 aaPredicted RBP8.16□□□□□ -1.1
ZNF540-204ENST00000586792 CD68P34810 354 aaPredicted RBP8.16□□□□□ -1.1
ZNF540-204ENST00000586792 HDGFL1Q5TGJ6 251 aa8.15□□□□□ -1.1
ZNF540-204ENST00000586792 ACAD11Q709F0 780 aa8.15□□□□□ -1.1
ZNF540-204ENST00000586792 CLEC10AQ8IUN9 316 aa8.15□□□□□ -1.1
ZNF540-204ENST00000586792 UCN2Q96RP3 112 aa8.15□□□□□ -1.1
ZNF540-204ENST00000586792 UTP3Q9NQZ2 479 aaKnown RBP eCLIP8.15□□□□□ -1.1
ZNF540-204ENST00000586792 HMX2A2RU54 273 aa8.14□□□□□ -1.11
ZNF540-204ENST00000586792 JAG1P78504 1218 aa8.14□□□□□ -1.11
ZNF540-204ENST00000586792 LARP1Q6PKG0 1096 aaKnown RBP8.14□□□□□ -1.11
ZNF540-204ENST00000586792 FAM46AQ96IP4 442 aaKnown RBP8.14□□□□□ -1.11
ZNF540-204ENST00000586792 MYRFLQ96LU7 910 aa8.14□□□□□ -1.11
ZNF540-204ENST00000586792 NSUN5Q96P11 429 aaKnown RBP8.14□□□□□ -1.11
ZNF540-204ENST00000586792 WDR62O43379 1518 aa8.13□□□□□ -1.11
ZNF540-204ENST00000586792 MMP20O60882 483 aa8.13□□□□□ -1.11
ZNF540-204ENST00000586792 CMTR1Q8N1G2 835 aaKnown RBP8.13□□□□□ -1.11
ZNF540-204ENST00000586792 GALNT11Q8NCW6 608 aa8.13□□□□□ -1.11
ZNF540-204ENST00000586792 ADAMTS19Q8TE59 1207 aa8.13□□□□□ -1.11
ZNF540-204ENST00000586792 VTI1AQ96AJ9 217 aa8.13□□□□□ -1.11
ZNF540-204ENST00000586792 MYO19Q96H55 970 aa8.13□□□□□ -1.11
ZNF540-204ENST00000586792 FAM83CQ9BQN1 747 aa8.13□□□□□ -1.11
ZNF540-204ENST00000586792 KRTAP4-9Q9BYQ8 210 aa8.13□□□□□ -1.11
ZNF540-204ENST00000586792 TRIM33Q9UPN9 1127 aa8.13□□□□□ -1.11
ZNF540-204ENST00000586792 LINC01387J3KSC0 135 aa8.12□□□□□ -1.11
ZNF540-204ENST00000586792 SUPT5HO00267 1087 aaKnown RBP8.12□□□□□ -1.11
ZNF540-204ENST00000586792 OPLAHO14841 1288 aa8.12□□□□□ -1.11
ZNF540-204ENST00000586792 FOXO3O43524 673 aa8.11□□□□□ -1.11
ZNF540-204ENST00000586792 FAM117BQ6P1L5 589 aa8.11□□□□□ -1.11
ZNF540-204ENST00000586792 KLHL23Q8NBE8 558 aa8.11□□□□□ -1.11
ZNF540-204ENST00000586792 SHKBP1Q8TBC3 707 aa8.11□□□□□ -1.11
ZNF540-204ENST00000586792 QTRT2Q9H974 415 aaKnown RBP8.11□□□□□ -1.11
ZNF540-204ENST00000586792 POM121CA8CG34 1229 aa8.1□□□□□ -1.11
ZNF540-204ENST00000586792 SART1O43290 800 aaKnown RBP8.1□□□□□ -1.11
ZNF540-204ENST00000586792 WISP1O95388 367 aa8.1□□□□□ -1.11
ZNF540-204ENST00000586792 DUOXA2Q1HG44 320 aa8.1□□□□□ -1.11
ZNF540-204ENST00000586792 FAM20CQ8IXL6 584 aa8.1□□□□□ -1.11
ZNF540-204ENST00000586792 RGL4Q8IZJ4 473 aa8.1□□□□□ -1.11
ZNF540-204ENST00000586792 GIMAP7Q8NHV1 300 aa8.1□□□□□ -1.11
ZNF540-204ENST00000586792 ASIC4Q96FT7 647 aa8.1□□□□□ -1.11
ZNF540-204ENST00000586792 ANGEL1Q9UNK9 670 aaKnown RBP8.1□□□□□ -1.11
ZNF540-204ENST00000586792 OGFOD2Q6N063 350 aa8.09□□□□□ -1.11
ZNF540-204ENST00000586792 SPACA7Q96KW9 195 aa8.09□□□□□ -1.11
ZNF540-204ENST00000586792 KCNF1Q9H3M0 494 aa8.09□□□□□ -1.11
ZNF540-204ENST00000586792 USP20Q9Y2K6 914 aa8.09□□□□□ -1.11
ZNF540-204ENST00000586792 SMNDC1O75940 238 aaKnown RBP eCLIP8.08□□□□□ -1.12
ZNF540-204ENST00000586792 CDC27P30260 824 aa8.08□□□□□ -1.12
ZNF540-204ENST00000586792 DPYDQ12882 1025 aa8.08□□□□□ -1.12
ZNF540-204ENST00000586792 KIAA1211Q6ZU35 1233 aa8.08□□□□□ -1.12
ZNF540-204ENST00000586792 BEND4Q6ZU67 534 aa8.08□□□□□ -1.12
ZNF540-204ENST00000586792 NLRP13Q86W25 1043 aa8.08□□□□□ -1.12
ZNF540-204ENST00000586792 POU5F2Q8N7G0 328 aa8.08□□□□□ -1.12
ZNF540-204ENST00000586792 POM121Q96HA1 1249 aa8.08□□□□□ -1.12
ZNF540-204ENST00000586792 HIF3AQ9Y2N7 669 aa8.08□□□□□ -1.12
ZNF540-204ENST00000586792 BMP3P12645 472 aa8.07□□□□□ -1.12
ZNF540-204ENST00000586792 PPP1R3FQ6ZSY5 799 aaPredicted RBP8.07□□□□□ -1.12
ZNF540-204ENST00000586792 TREML1Q86YW5 311 aa8.07□□□□□ -1.12
ZNF540-204ENST00000586792 ABI1Q8IZP0 508 aa8.07□□□□□ -1.12
ZNF540-204ENST00000586792 KCNK4Q9NYG8 393 aa8.07□□□□□ -1.12
ZNF540-204ENST00000586792 PIM2Q9P1W9 311 aa8.07□□□□□ -1.12
ZNF540-204ENST00000586792 KCNMB2Q9Y691 235 aa8.07□□□□□ -1.12
ZNF540-204ENST00000586792 ABCC8Q09428 1581 aa8.06□□□□□ -1.12
ZNF540-204ENST00000586792 FAM177BA6PVY3 158 aa8.06□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms