RNA–Protein interactions for RNA: ENST00000584655.5

RFFL-212, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 2 BASIC

Gene RFFL, Length 4,039 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-212ENST00000584655 XRN1Q8IZH2 1706 aaKnown RBP12.27□□□□□ -0.45
RFFL-212ENST00000584655 SYCE3A1L190 88 aa12.27□□□□□ -0.45
RFFL-212ENST00000584655 GJB2P29033 226 aa12.27□□□□□ -0.45
RFFL-212ENST00000584655 GIGYF2Q6Y7W6 1299 aaKnown RBP12.27□□□□□ -0.45
RFFL-212ENST00000584655 NFXL1Q6ZNB6 911 aa12.27□□□□□ -0.45
RFFL-212ENST00000584655 FAM184AQ8NB25 1140 aa12.27□□□□□ -0.45
RFFL-212ENST00000584655 UBN2Q6ZU65 1347 aa12.27□□□□□ -0.45
RFFL-212ENST00000584655 PRKAB2O43741 272 aa12.27□□□□□ -0.45
RFFL-212ENST00000584655 GADD45BO75293 160 aaPredicted RBP12.27□□□□□ -0.45
RFFL-212ENST00000584655 NUP133Q8WUM0 1156 aa12.27□□□□□ -0.45
RFFL-212ENST00000584655 RUFY3Q7L099 469 aa12.26□□□□□ -0.45
RFFL-212ENST00000584655 ATG9AQ7Z3C6 839 aa12.26□□□□□ -0.45
RFFL-212ENST00000584655 TTLL11Q8NHH1 800 aa12.26□□□□□ -0.45
RFFL-212ENST00000584655 FMN2Q9NZ56 1722 aa12.26□□□□□ -0.45
RFFL-212ENST00000584655 KIF24Q5T7B8 1368 aa12.26□□□□□ -0.45
RFFL-212ENST00000584655 MAP3K15Q6ZN16 1313 aa12.26□□□□□ -0.45
RFFL-212ENST00000584655 CYP2D7A0A087X1C5 515 aa12.26□□□□□ -0.45
RFFL-212ENST00000584655 GOLGA6L4A6NEF3 574 aa12.26□□□□□ -0.45
RFFL-212ENST00000584655 LARP1BQ659C4 914 aaKnown RBP12.26□□□□□ -0.45
RFFL-212ENST00000584655 SEPT12Q8IYM1 358 aa12.26□□□□□ -0.45
RFFL-212ENST00000584655 MAGEB6Q8N7X4 407 aa12.26□□□□□ -0.45
RFFL-212ENST00000584655 AK7Q96M32 723 aa12.26□□□□□ -0.45
RFFL-212ENST00000584655 ARID3AQ99856 593 aa12.26□□□□□ -0.45
RFFL-212ENST00000584655 LSG1Q9H089 658 aaKnown RBP12.26□□□□□ -0.45
RFFL-212ENST00000584655 PUS7LQ9H0K6 701 aaKnown RBP12.26□□□□□ -0.45
RFFL-212ENST00000584655 BABAM1Q9NWV8 329 aa12.26□□□□□ -0.45
RFFL-212ENST00000584655 COL5A2P05997 1499 aaPredicted RBP12.26□□□□□ -0.45
RFFL-212ENST00000584655 CHD2O14647 1828 aaKnown RBP12.26□□□□□ -0.45
RFFL-212ENST00000584655 CCDC171Q6TFL3 1326 aa12.26□□□□□ -0.45
RFFL-212ENST00000584655 SLC27A2O14975 620 aa12.26□□□□□ -0.45
RFFL-212ENST00000584655 KLRK1P26718 216 aa12.26□□□□□ -0.45
RFFL-212ENST00000584655 IGHMBP2P38935 993 aaKnown RBP12.26□□□□□ -0.45
RFFL-212ENST00000584655 Q6ZUG5 572 aa12.26□□□□□ -0.45
RFFL-212ENST00000584655 UTP14AQ9BVJ6 771 aaKnown RBP12.26□□□□□ -0.45
RFFL-212ENST00000584655 ARMT1Q9H993 441 aa12.26□□□□□ -0.45
RFFL-212ENST00000584655 LINC00116Q8NCU8 138 aa12.25□□□□□ -0.45
RFFL-212ENST00000584655 SDR42E1Q8WUS8 393 aa12.25□□□□□ -0.45
RFFL-212ENST00000584655 OSBP2Q969R2 916 aa12.25□□□□□ -0.45
RFFL-212ENST00000584655 NCOA3Q9Y6Q9 1424 aa12.25□□□□□ -0.45
RFFL-212ENST00000584655 AFF2P51816 1311 aa12.25□□□□□ -0.45
RFFL-212ENST00000584655 MICU3Q86XE3 530 aa12.25□□□□□ -0.45
RFFL-212ENST00000584655 SETDB2Q96T68 719 aa12.25□□□□□ -0.45
RFFL-212ENST00000584655 ANKRD26Q9UPS8 1709 aa12.25□□□□□ -0.45
RFFL-212ENST00000584655 H7C1W4 665 aa12.25□□□□□ -0.45
RFFL-212ENST00000584655 IL15P40933 162 aaPredicted RBP12.25□□□□□ -0.45
RFFL-212ENST00000584655 ME3Q16798 604 aa12.25□□□□□ -0.45
RFFL-212ENST00000584655 TBC1D9BQ66K14 1250 aa12.25□□□□□ -0.45
RFFL-212ENST00000584655 FTOQ9C0B1 505 aaKnown RBP eCLIP12.25□□□□□ -0.45
RFFL-212ENST00000584655 PALLDQ8WX93 1383 aa12.25□□□□□ -0.45
RFFL-212ENST00000584655 SH3TC1Q8TE82 1336 aa12.24□□□□□ -0.45
RFFL-212ENST00000584655 POLR3DP05423 398 aaPredicted RBP12.24□□□□□ -0.45
RFFL-212ENST00000584655 CTSWP56202 376 aa12.24□□□□□ -0.45
RFFL-212ENST00000584655 DNM1Q05193 864 aaKnown RBP12.24□□□□□ -0.45
RFFL-212ENST00000584655 CTDSPL2Q05D32 466 aa12.24□□□□□ -0.45
RFFL-212ENST00000584655 CELF1Q92879 486 aaKnown RBP12.24□□□□□ -0.45
RFFL-212ENST00000584655 TPCN1Q9ULQ1 816 aa12.24□□□□□ -0.45
RFFL-212ENST00000584655 M0R2C6 588 aa12.24□□□□□ -0.45
RFFL-212ENST00000584655 LRP10Q7Z4F1 713 aa12.24□□□□□ -0.45
RFFL-212ENST00000584655 AIDAQ96BJ3 306 aa12.24□□□□□ -0.45
RFFL-212ENST00000584655 RFX5P48382 616 aaPredicted RBP12.23□□□□□ -0.45
RFFL-212ENST00000584655 TDO2P48775 406 aa12.23□□□□□ -0.45
RFFL-212ENST00000584655 RALYLQ86SE5 291 aaKnown RBP12.23□□□□□ -0.45
RFFL-212ENST00000584655 ZBTB38Q8NAP3 1195 aaPredicted RBP12.23□□□□□ -0.45
RFFL-212ENST00000584655 SPATA31A1Q5TZJ5 1347 aa12.23□□□□□ -0.45
RFFL-212ENST00000584655 CYP21A2P08686 494 aa12.23□□□□□ -0.45
RFFL-212ENST00000584655 RNF20Q5VTR2 975 aa12.23□□□□□ -0.45
RFFL-212ENST00000584655 GAS2L3Q86XJ1 694 aa12.23□□□□□ -0.45
RFFL-212ENST00000584655 UIMC1Q96RL1 719 aa12.23□□□□□ -0.45
RFFL-212ENST00000584655 SCAF8Q9UPN6 1271 aaKnown RBP12.23□□□□□ -0.45
RFFL-212ENST00000584655 G3V3G9 751 aa12.22□□□□□ -0.45
RFFL-212ENST00000584655 C6orf229H3BNL8 230 aa12.22□□□□□ -0.45
RFFL-212ENST00000584655 MCAMP43121 646 aa12.22□□□□□ -0.45
RFFL-212ENST00000584655 GNL2Q13823 731 aaKnown RBP12.22□□□□□ -0.45
RFFL-212ENST00000584655 DCAF8Q5TAQ9 597 aa12.22□□□□□ -0.45
RFFL-212ENST00000584655 ISM2Q6H9L7 571 aa12.22□□□□□ -0.45
RFFL-212ENST00000584655 COPRSQ9NQ92 184 aa12.22□□□□□ -0.45
RFFL-212ENST00000584655 STAP2Q9UGK3 403 aa12.22□□□□□ -0.45
RFFL-212ENST00000584655 CPLX1O14810 134 aa12.22□□□□□ -0.45
RFFL-212ENST00000584655 MCMDC2Q4G0Z9 681 aa12.22□□□□□ -0.45
RFFL-212ENST00000584655 CCDC102BQ68D86 513 aa12.22□□□□□ -0.45
RFFL-212ENST00000584655 RTCBQ9Y3I0 505 aaKnown RBP12.22□□□□□ -0.45
RFFL-212ENST00000584655 RAD50Q92878 1312 aa12.22□□□□□ -0.45
RFFL-212ENST00000584655 KNDC1Q76NI1 1749 aa12.22□□□□□ -0.45
RFFL-212ENST00000584655 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.22□□□□□ -0.45
RFFL-212ENST00000584655 HSPA4P34932 840 aa12.22□□□□□ -0.45
RFFL-212ENST00000584655 NEK1Q96PY6 1258 aa12.22□□□□□ -0.45
RFFL-212ENST00000584655 LIMCH1Q9UPQ0 1083 aa12.22□□□□□ -0.45
RFFL-212ENST00000584655 B4E1Z4 1266 aa12.21□□□□□ -0.45
RFFL-212ENST00000584655 UBE2Q2LH0YL09 131 aa12.21□□□□□ -0.45
RFFL-212ENST00000584655 EVX2Q03828 476 aa12.21□□□□□ -0.45
RFFL-212ENST00000584655 CKAP2LQ8IYA6 745 aa12.21□□□□□ -0.45
RFFL-212ENST00000584655 PIH1D3Q9NQM4 214 aaKnown RBP12.21□□□□□ -0.45
RFFL-212ENST00000584655 BAZ2BQ9UIF8 2168 aaKnown RBP12.21□□□□□ -0.45
RFFL-212ENST00000584655 MBD4O95243 580 aa12.21□□□□□ -0.45
RFFL-212ENST00000584655 SYT1P21579 422 aa12.21□□□□□ -0.46
RFFL-212ENST00000584655 INTS5Q6P9B9 1019 aaKnown RBP12.21□□□□□ -0.46
RFFL-212ENST00000584655 OSBPL3Q9H4L5 887 aa12.21□□□□□ -0.46
RFFL-212ENST00000584655 GPAA1O43292 621 aa12.21□□□□□ -0.46
RFFL-212ENST00000584655 ZDHHC9Q9Y397 364 aa12.21□□□□□ -0.46
RFFL-212ENST00000584655 ZNF622Q969S3 477 aaKnown RBP eCLIP12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms