RNA–Protein interactions for RNA: ENST00000583800.1

SMCHD1-210, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 5

Gene SMCHD1, Length 865 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-210ENST00000583800 TTLL7Q6ZT98 887 aa10.32□□□□□ -0.76
SMCHD1-210ENST00000583800 THUMPD2Q9BTF0 503 aaKnown RBP10.32□□□□□ -0.76
SMCHD1-210ENST00000583800 ZMYND15Q9H091 742 aa10.32□□□□□ -0.76
SMCHD1-210ENST00000583800 RRP7AQ9Y3A4 280 aaKnown RBP10.32□□□□□ -0.76
SMCHD1-210ENST00000583800 RIC1Q4ADV7 1423 aa10.32□□□□□ -0.76
SMCHD1-210ENST00000583800 UBN2Q6ZU65 1347 aa10.32□□□□□ -0.76
SMCHD1-210ENST00000583800 IBTKQ9P2D0 1353 aaPredicted RBP10.31□□□□□ -0.76
SMCHD1-210ENST00000583800 VEGFBP49765 207 aa10.31□□□□□ -0.76
SMCHD1-210ENST00000583800 EIF4A1P60842 406 aaKnown RBP10.31□□□□□ -0.76
SMCHD1-210ENST00000583800 KIF6Q6ZMV9 814 aa10.31□□□□□ -0.76
SMCHD1-210ENST00000583800 PNISRQ8TF01 805 aaKnown RBP10.31□□□□□ -0.76
SMCHD1-210ENST00000583800 PSMD1Q99460 953 aa10.31□□□□□ -0.76
SMCHD1-210ENST00000583800 NYXQ9GZU5 481 aa10.31□□□□□ -0.76
SMCHD1-210ENST00000583800 ZBTB3Q9H5J0 574 aa10.31□□□□□ -0.76
SMCHD1-210ENST00000583800 TAF1P21675 1872 aa10.3□□□□□ -0.76
SMCHD1-210ENST00000583800 THSD7BQ9C0I4 1608 aa10.3□□□□□ -0.76
SMCHD1-210ENST00000583800 ERVV-1B6SEH8 477 aa10.3□□□□□ -0.76
SMCHD1-210ENST00000583800 NEFMP07197 916 aa10.3□□□□□ -0.76
SMCHD1-210ENST00000583800 SUSD4Q5VX71 490 aa10.3□□□□□ -0.76
SMCHD1-210ENST00000583800 GPC2Q8N158 579 aa10.3□□□□□ -0.76
SMCHD1-210ENST00000583800 PTCD2Q8WV60 388 aaKnown RBP10.3□□□□□ -0.76
SMCHD1-210ENST00000583800 RPGRQ92834 1020 aaKnown RBP10.3□□□□□ -0.76
SMCHD1-210ENST00000583800 KCTD12Q96CX2 325 aaKnown RBP10.3□□□□□ -0.76
SMCHD1-210ENST00000583800 PLEKHF1Q96S99 279 aa10.3□□□□□ -0.76
SMCHD1-210ENST00000583800 GJA3Q9Y6H8 435 aa10.3□□□□□ -0.76
SMCHD1-210ENST00000583800 TCERG1O14776 1098 aaKnown RBP10.29□□□□□ -0.76
SMCHD1-210ENST00000583800 SEMA3EO15041 775 aa10.29□□□□□ -0.76
SMCHD1-210ENST00000583800 EIF6P56537 245 aaKnown RBP10.29□□□□□ -0.76
SMCHD1-210ENST00000583800 NFE2L2Q16236 605 aa10.29□□□□□ -0.76
SMCHD1-210ENST00000583800 PNMA8AQ86V59 439 aaPredicted RBP10.29□□□□□ -0.76
SMCHD1-210ENST00000583800 CNTROBQ8N137 903 aa10.29□□□□□ -0.76
SMCHD1-210ENST00000583800 JDP2Q8WYK2 163 aa10.29□□□□□ -0.76
SMCHD1-210ENST00000583800 AIDAQ96BJ3 306 aa10.29□□□□□ -0.76
SMCHD1-210ENST00000583800 PPEF1O14829 653 aaPredicted RBP10.28□□□□□ -0.76
SMCHD1-210ENST00000583800 NTSR2O95665 410 aa10.28□□□□□ -0.76
SMCHD1-210ENST00000583800 HOXA10P31260 410 aaPredicted RBP10.28□□□□□ -0.76
SMCHD1-210ENST00000583800 FMR1Q06787 632 aaKnown RBP eCLIP10.28□□□□□ -0.76
SMCHD1-210ENST00000583800 CC2D2BQ6DHV5 1058 aa10.28□□□□□ -0.76
SMCHD1-210ENST00000583800 ZNF34Q8IZ26 560 aa10.28□□□□□ -0.76
SMCHD1-210ENST00000583800 LARGE2Q8N3Y3 721 aa10.28□□□□□ -0.76
SMCHD1-210ENST00000583800 RASSF10A6NK89 507 aa10.27□□□□□ -0.77
SMCHD1-210ENST00000583800 LMOD1P29536 600 aaPredicted RBP10.27□□□□□ -0.77
SMCHD1-210ENST00000583800 EPS15P42566 896 aa10.27□□□□□ -0.77
SMCHD1-210ENST00000583800 CTCFP49711 727 aaPredicted RBP10.27□□□□□ -0.77
SMCHD1-210ENST00000583800 SCNN1DP51172 638 aa10.27□□□□□ -0.77
SMCHD1-210ENST00000583800 E2F4Q16254 413 aa10.27□□□□□ -0.77
SMCHD1-210ENST00000583800 DEFB115Q30KQ5 88 aa10.27□□□□□ -0.77
SMCHD1-210ENST00000583800 GIGYF2Q6Y7W6 1299 aaKnown RBP10.27□□□□□ -0.77
SMCHD1-210ENST00000583800 RBM17Q96I25 401 aaKnown RBP10.27□□□□□ -0.77
SMCHD1-210ENST00000583800 PRDM10Q9NQV6 1147 aa10.27□□□□□ -0.77
SMCHD1-210ENST00000583800 WBP1LQ9NX94 342 aa10.27□□□□□ -0.77
SMCHD1-210ENST00000583800 ABT1Q9ULW3 272 aaKnown RBP10.27□□□□□ -0.77
SMCHD1-210ENST00000583800 ERBB4Q15303 1308 aa10.27□□□□□ -0.77
SMCHD1-210ENST00000583800 MAPK8IP3Q9UPT6 1336 aa10.27□□□□□ -0.77
SMCHD1-210ENST00000583800 PPIP5K2O43314 1243 aa10.26□□□□□ -0.77
SMCHD1-210ENST00000583800 ANXA1P04083 346 aa10.26□□□□□ -0.77
SMCHD1-210ENST00000583800 LBX1P52954 281 aa10.26□□□□□ -0.77
SMCHD1-210ENST00000583800 AOC3Q16853 763 aa10.26□□□□□ -0.77
SMCHD1-210ENST00000583800 PROSER3Q2NL68 480 aa10.26□□□□□ -0.77
SMCHD1-210ENST00000583800 LRP10Q7Z4F1 713 aa10.26□□□□□ -0.77
SMCHD1-210ENST00000583800 NIM1KQ8IY84 436 aa10.26□□□□□ -0.77
SMCHD1-210ENST00000583800 CRAMP1Q96RY5 1269 aa10.26□□□□□ -0.77
SMCHD1-210ENST00000583800 DDX21Q9NR30 783 aaKnown RBP eCLIP10.26□□□□□ -0.77
SMCHD1-210ENST00000583800 TSPYL4Q9UJ04 414 aa10.26□□□□□ -0.77
SMCHD1-210ENST00000583800 DDX60Q8IY21 1712 aaKnown RBP10.26□□□□□ -0.77
SMCHD1-210ENST00000583800 ABCC4O15439 1325 aa10.26□□□□□ -0.77
SMCHD1-210ENST00000583800 WDR33Q9C0J8 1336 aaKnown RBP10.26□□□□□ -0.77
SMCHD1-210ENST00000583800 HSPA8P11142 646 aaKnown RBP10.25□□□□□ -0.77
SMCHD1-210ENST00000583800 EIF2S2P20042 333 aaKnown RBP10.25□□□□□ -0.77
SMCHD1-210ENST00000583800 PDIA6Q15084 440 aa10.25□□□□□ -0.77
SMCHD1-210ENST00000583800 PPP4R3BQ5MIZ7 849 aa10.25□□□□□ -0.77
SMCHD1-210ENST00000583800 PPP1R42Q7Z4L9 355 aa10.25□□□□□ -0.77
SMCHD1-210ENST00000583800 LRRC37AA6NMS7 1700 aa10.24□□□□□ -0.77
SMCHD1-210ENST00000583800 DUOX1Q9NRD9 1551 aa10.24□□□□□ -0.77
SMCHD1-210ENST00000583800 TRAF5O00463 557 aa10.24□□□□□ -0.77
SMCHD1-210ENST00000583800 GRM1Q13255 1194 aa10.24□□□□□ -0.77
SMCHD1-210ENST00000583800 GRIPAP1Q4V328 841 aa10.24□□□□□ -0.77
SMCHD1-210ENST00000583800 PARP10Q53GL7 1025 aa10.24□□□□□ -0.77
SMCHD1-210ENST00000583800 NLRP3Q96P20 1036 aa10.24□□□□□ -0.77
SMCHD1-210ENST00000583800 UTP14AQ9BVJ6 771 aaKnown RBP10.24□□□□□ -0.77
SMCHD1-210ENST00000583800 RIPK4P57078 832 aa10.23□□□□□ -0.77
SMCHD1-210ENST00000583800 CYP4F22Q6NT55 531 aa10.23□□□□□ -0.77
SMCHD1-210ENST00000583800 USP50Q70EL3 339 aaPredicted RBP10.23□□□□□ -0.77
SMCHD1-210ENST00000583800 NECTIN2Q92692 538 aa10.23□□□□□ -0.77
SMCHD1-210ENST00000583800 CAPNS2Q96L46 248 aa10.23□□□□□ -0.77
SMCHD1-210ENST00000583800 ATP6V0A2Q9Y487 856 aa10.23□□□□□ -0.77
SMCHD1-210ENST00000583800 POLR2AP24928 1970 aaKnown RBP10.23□□□□□ -0.77
SMCHD1-210ENST00000583800 COL4A1P02462 1669 aa10.22□□□□□ -0.77
SMCHD1-210ENST00000583800 HCLS1P14317 486 aaPredicted RBP10.22□□□□□ -0.77
SMCHD1-210ENST00000583800 FOXK1P85037 733 aa10.22□□□□□ -0.77
SMCHD1-210ENST00000583800 MAP2K1Q02750 393 aaPredicted RBP10.22□□□□□ -0.77
SMCHD1-210ENST00000583800 CXCL9Q07325 125 aa10.22□□□□□ -0.77
SMCHD1-210ENST00000583800 AIMP1Q12904 312 aaKnown RBP10.22□□□□□ -0.77
SMCHD1-210ENST00000583800 SLC10A5Q5PT55 438 aa10.22□□□□□ -0.77
SMCHD1-210ENST00000583800 CST9Q5W186 159 aa10.22□□□□□ -0.77
SMCHD1-210ENST00000583800 ZNF428Q96B54 188 aa10.22□□□□□ -0.77
SMCHD1-210ENST00000583800 TMX4Q9H1E5 349 aaPredicted RBP10.22□□□□□ -0.77
SMCHD1-210ENST00000583800 PNNQ9H307 717 aaKnown RBP10.22□□□□□ -0.77
SMCHD1-210ENST00000583800 ADARB2Q9NS39 739 aaKnown RBP10.22□□□□□ -0.77
SMCHD1-210ENST00000583800 GPRC5DQ9NZD1 345 aa10.22□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms